RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 CCDC84Q86UT8 332 aaPredicted RBP22.2■■□□□ 1.14
PRPF40B-215ENST00000551418 DZIP1Q86YF9 867 aaKnown RBP22.2■■□□□ 1.14
PRPF40B-215ENST00000551418 SRRDQ9UH36 339 aa22.2■■□□□ 1.14
PRPF40B-215ENST00000551418 CXCL11O14625 94 aa22.19■■□□□ 1.14
PRPF40B-215ENST00000551418 ZBTB22O15209 634 aa22.19■■□□□ 1.14
PRPF40B-215ENST00000551418 FMNL1O95466 1100 aaPredicted RBP22.19■■□□□ 1.14
PRPF40B-215ENST00000551418 PTPRAP18433 802 aa22.19■■□□□ 1.14
PRPF40B-215ENST00000551418 BTDP43251 543 aa22.19■■□□□ 1.14
PRPF40B-215ENST00000551418 PICALMQ13492 652 aa22.19■■□□□ 1.14
PRPF40B-215ENST00000551418 TBC1D9Q6ZT07 1266 aa22.19■■□□□ 1.14
PRPF40B-215ENST00000551418 ZSCAN29Q8IWY8 852 aaPredicted RBP22.19■■□□□ 1.14
PRPF40B-215ENST00000551418 FAM163AQ96GL9 167 aaPredicted RBP22.19■■□□□ 1.14
PRPF40B-215ENST00000551418 PHIPQ8WWQ0 1821 aa22.19■■□□□ 1.14
PRPF40B-215ENST00000551418 BCRP11274 1271 aa22.18■■□□□ 1.14
PRPF40B-215ENST00000551418 RHBDL3P58872 404 aa22.18■■□□□ 1.14
PRPF40B-215ENST00000551418 MAP3K10Q02779 954 aa22.18■■□□□ 1.14
PRPF40B-215ENST00000551418 MECOMQ03112 1051 aa22.18■■□□□ 1.14
PRPF40B-215ENST00000551418 SCYL3Q8IZE3 742 aa22.18■■□□□ 1.14
PRPF40B-215ENST00000551418 ZGPATQ8N5A5 531 aaKnown RBP22.18■■□□□ 1.14
PRPF40B-215ENST00000551418 SHISA4Q96DD7 197 aa22.18■■□□□ 1.14
PRPF40B-215ENST00000551418 NEUROD6Q96NK8 337 aa22.18■■□□□ 1.14
PRPF40B-215ENST00000551418 HDAC5Q9UQL6 1122 aa22.18■■□□□ 1.14
PRPF40B-215ENST00000551418 AFG3L2Q9Y4W6 797 aa22.18■■□□□ 1.14
PRPF40B-215ENST00000551418 PTPRFP10586 1907 aa22.18■■□□□ 1.14
PRPF40B-215ENST00000551418 MGAMO43451 1857 aa22.17■■□□□ 1.14
PRPF40B-215ENST00000551418 FAM196BA6NMK8 535 aa22.17■■□□□ 1.14
PRPF40B-215ENST00000551418 GNRH1P01148 92 aa22.17■■□□□ 1.14
PRPF40B-215ENST00000551418 MTX1Q13505 466 aa22.17■■□□□ 1.14
PRPF40B-215ENST00000551418 ARHGAP45Q92619 1136 aa22.17■■□□□ 1.14
PRPF40B-215ENST00000551418 GCC1Q96CN9 775 aa22.17■■□□□ 1.14
PRPF40B-215ENST00000551418 HMG20BQ9P0W2 317 aa22.17■■□□□ 1.14
PRPF40B-215ENST00000551418 MROH7-TTC4A0A0A0MT08 1334 aa22.16■■□□□ 1.14
PRPF40B-215ENST00000551418 PDS5AQ29RF7 1337 aaKnown RBP22.16■■□□□ 1.14
PRPF40B-215ENST00000551418 A0A0G2JLL6 359 aaPredicted RBP22.16■■□□□ 1.14
PRPF40B-215ENST00000551418 PNMA6EA0A0J9YXQ4 647 aa22.16■■□□□ 1.14
PRPF40B-215ENST00000551418 BCAR3O75815 825 aa22.16■■□□□ 1.14
PRPF40B-215ENST00000551418 GNAI3P08754 354 aa22.16■■□□□ 1.14
PRPF40B-215ENST00000551418 PRMT2P55345 433 aa22.16■■□□□ 1.14
PRPF40B-215ENST00000551418 GADL1Q6ZQY3 521 aa22.16■■□□□ 1.14
PRPF40B-215ENST00000551418 PRRT2Q7Z6L0 340 aaPredicted RBP22.16■■□□□ 1.14
PRPF40B-215ENST00000551418 PICK1Q9NRD5 415 aa22.16■■□□□ 1.14
PRPF40B-215ENST00000551418 GABRQQ9UN88 632 aa22.16■■□□□ 1.14
PRPF40B-215ENST00000551418 CEP290O15078 2479 aa22.16■■□□□ 1.14
PRPF40B-215ENST00000551418 MYPNQ86TC9 1320 aa22.15■■□□□ 1.14
PRPF40B-215ENST00000551418 GPR75-ASB3A0A0A6YYF3 556 aa22.15■■□□□ 1.14
PRPF40B-215ENST00000551418 TRIM27P14373 513 aa22.15■■□□□ 1.14
PRPF40B-215ENST00000551418 PRKCZQ05513 592 aa22.15■■□□□ 1.14
PRPF40B-215ENST00000551418 ERICH6Q7L0X2 663 aa22.15■■□□□ 1.14
PRPF40B-215ENST00000551418 AKAP2Q9Y2D5 859 aa22.15■■□□□ 1.14
PRPF40B-215ENST00000551418 DOCK1Q14185 1865 aa22.15■■□□□ 1.14
PRPF40B-215ENST00000551418 GRK4P32298 578 aa22.14■■□□□ 1.13
PRPF40B-215ENST00000551418 MVPQ14764 893 aaKnown RBP22.14■■□□□ 1.13
PRPF40B-215ENST00000551418 SPTY2D1Q68D10 685 aaPredicted RBP22.14■■□□□ 1.13
PRPF40B-215ENST00000551418 RAET1EQ8TD07 263 aa22.14■■□□□ 1.13
PRPF40B-215ENST00000551418 CLUAP1Q96AJ1 413 aa22.14■■□□□ 1.13
PRPF40B-215ENST00000551418 PARK7Q99497 189 aaKnown RBP22.14■■□□□ 1.13
PRPF40B-215ENST00000551418 TRIM75PA6NK02 468 aa22.13■■□□□ 1.13
PRPF40B-215ENST00000551418 RRP1BQ14684 758 aaKnown RBP22.13■■□□□ 1.13
PRPF40B-215ENST00000551418 SPATA5Q8NB90 893 aa22.13■■□□□ 1.13
PRPF40B-215ENST00000551418 FRAT1Q92837 279 aaPredicted RBP22.13■■□□□ 1.13
PRPF40B-215ENST00000551418 COLQQ9Y215 455 aaPredicted RBP22.13■■□□□ 1.13
PRPF40B-215ENST00000551418 DOCK3Q8IZD9 2030 aa22.13■■□□□ 1.13
PRPF40B-215ENST00000551418 H0YGN5 161 aa22.12■■□□□ 1.13
PRPF40B-215ENST00000551418 CTNND1O60716 968 aaKnown RBP22.12■■□□□ 1.13
PRPF40B-215ENST00000551418 HOXD10P28358 340 aa22.12■■□□□ 1.13
PRPF40B-215ENST00000551418 FASTKD5Q7L8L6 764 aaKnown RBP22.12■■□□□ 1.13
PRPF40B-215ENST00000551418 SLF2Q8IX21 1173 aa22.12■■□□□ 1.13
PRPF40B-215ENST00000551418 NSUN4Q96CB9 384 aaKnown RBP22.12■■□□□ 1.13
PRPF40B-215ENST00000551418 CCL5P13501 91 aa22.11■■□□□ 1.13
PRPF40B-215ENST00000551418 MCAMP43121 646 aa22.11■■□□□ 1.13
PRPF40B-215ENST00000551418 CCER2I3L3R5 266 aa22.1■■□□□ 1.13
PRPF40B-215ENST00000551418 GNAI2P04899 355 aa22.1■■□□□ 1.13
PRPF40B-215ENST00000551418 FCGRTP55899 365 aa22.1■■□□□ 1.13
PRPF40B-215ENST00000551418 TREML2Q5T2D2 321 aa22.1■■□□□ 1.13
PRPF40B-215ENST00000551418 GORABQ5T7V8 394 aa22.1■■□□□ 1.13
PRPF40B-215ENST00000551418 ATF7IPQ6VMQ6 1270 aa22.1■■□□□ 1.13
PRPF40B-215ENST00000551418 BIN2Q9UBW5 565 aaPredicted RBP22.1■■□□□ 1.13
PRPF40B-215ENST00000551418 ARID4AP29374 1257 aaPredicted RBP22.09■■□□□ 1.13
PRPF40B-215ENST00000551418 FXR1P51114 621 aaKnown RBP eCLIP22.09■■□□□ 1.13
PRPF40B-215ENST00000551418 RNF208Q9H0X6 261 aa22.09■■□□□ 1.13
PRPF40B-215ENST00000551418 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.09■■□□□ 1.13
PRPF40B-215ENST00000551418 SNRKQ9NRH2 765 aa22.09■■□□□ 1.13
PRPF40B-215ENST00000551418 RAI14Q9P0K7 980 aa22.09■■□□□ 1.13
PRPF40B-215ENST00000551418 TBC1D12O60347 775 aa22.08■■□□□ 1.13
PRPF40B-215ENST00000551418 ELNP15502 786 aa22.08■■□□□ 1.13
PRPF40B-215ENST00000551418 FLT3LGP49771 235 aa22.08■■□□□ 1.13
PRPF40B-215ENST00000551418 G3BP1Q13283 466 aaKnown RBP eCLIP22.08■■□□□ 1.13
PRPF40B-215ENST00000551418 UNC93B1Q9H1C4 597 aa22.08■■□□□ 1.13
PRPF40B-215ENST00000551418 MYO5AQ9Y4I1 1855 aaKnown RBP22.08■■□□□ 1.13
PRPF40B-215ENST00000551418 IPO8O15397 1037 aaKnown RBP22.07■■□□□ 1.12
PRPF40B-215ENST00000551418 NPM3O75607 178 aaKnown RBP22.07■■□□□ 1.12
PRPF40B-215ENST00000551418 GJB1P08034 283 aa22.07■■□□□ 1.12
PRPF40B-215ENST00000551418 GJA8P48165 433 aa22.07■■□□□ 1.12
PRPF40B-215ENST00000551418 UBE2Q1Q7Z7E8 422 aa22.07■■□□□ 1.12
PRPF40B-215ENST00000551418 TMEM57Q8N5G2 664 aa22.07■■□□□ 1.12
PRPF40B-215ENST00000551418 SH3RF3Q8TEJ3 882 aaPredicted RBP22.07■■□□□ 1.12
PRPF40B-215ENST00000551418 OSBPL5Q9H0X9 879 aaPredicted RBP22.07■■□□□ 1.12
PRPF40B-215ENST00000551418 SLC45A1Q9Y2W3 748 aa22.07■■□□□ 1.12
PRPF40B-215ENST00000551418 ATAD5Q96QE3 1844 aa22.07■■□□□ 1.12
PRPF40B-215ENST00000551418 ADCY3O60266 1144 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms