RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 ALPK3Q96L96 1907 aa12.9□□□□□ -0.34
BEST3-210ENST00000551160 PHF20L1A8MW92 1017 aa12.9□□□□□ -0.34
BEST3-210ENST00000551160 SLURP2P0DP57 97 aa12.9□□□□□ -0.34
BEST3-210ENST00000551160 WWC1Q8IX03 1113 aa12.9□□□□□ -0.34
BEST3-210ENST00000551160 SCYL3Q8IZE3 742 aa12.9□□□□□ -0.34
BEST3-210ENST00000551160 ANKLE1Q8NAG6 615 aa12.9□□□□□ -0.34
BEST3-210ENST00000551160 COA7Q96BR5 231 aa12.9□□□□□ -0.34
BEST3-210ENST00000551160 GUCD1Q96NT3 240 aa12.9□□□□□ -0.34
BEST3-210ENST00000551160 NBPF3Q9H094 633 aa12.9□□□□□ -0.34
BEST3-210ENST00000551160 C11orf49Q9H6J7 331 aa12.9□□□□□ -0.34
BEST3-210ENST00000551160 PICK1Q9NRD5 415 aa12.9□□□□□ -0.34
BEST3-210ENST00000551160 C9orf78Q9NZ63 289 aaPredicted RBP12.9□□□□□ -0.34
BEST3-210ENST00000551160 SLC45A1Q9Y2W3 748 aa12.9□□□□□ -0.34
BEST3-210ENST00000551160 AFG3L2Q9Y4W6 797 aa12.9□□□□□ -0.34
BEST3-210ENST00000551160 TRIM75PA6NK02 468 aa12.89□□□□□ -0.35
BEST3-210ENST00000551160 VAMP4O75379 141 aa12.89□□□□□ -0.35
BEST3-210ENST00000551160 HMGCRP04035 888 aa12.89□□□□□ -0.35
BEST3-210ENST00000551160 CCDC84Q86UT8 332 aaPredicted RBP12.89□□□□□ -0.35
BEST3-210ENST00000551160 PFASO15067 1338 aa12.88□□□□□ -0.35
BEST3-210ENST00000551160 PDE8BO95263 885 aa12.88□□□□□ -0.35
BEST3-210ENST00000551160 TREML2Q5T2D2 321 aa12.88□□□□□ -0.35
BEST3-210ENST00000551160 FAM161BQ96MY7 647 aa12.88□□□□□ -0.35
BEST3-210ENST00000551160 BICC1Q9H694 974 aaKnown RBP12.88□□□□□ -0.35
BEST3-210ENST00000551160 USP40Q9NVE5 1235 aa12.88□□□□□ -0.35
BEST3-210ENST00000551160 VCANP13611 3396 aa12.87□□□□□ -0.35
BEST3-210ENST00000551160 TTC28Q96AY4 2481 aa12.87□□□□□ -0.35
BEST3-210ENST00000551160 PRDX5P30044 214 aa12.87□□□□□ -0.35
BEST3-210ENST00000551160 FAM110CQ1W6H9 321 aa12.87□□□□□ -0.35
BEST3-210ENST00000551160 CCDC27Q2M243 656 aa12.87□□□□□ -0.35
BEST3-210ENST00000551160 SLC4A10Q6U841 1118 aa12.87□□□□□ -0.35
BEST3-210ENST00000551160 SH3BP5LQ7L8J4 393 aa12.87□□□□□ -0.35
BEST3-210ENST00000551160 ANKRD44Q8N8A2 993 aa12.87□□□□□ -0.35
BEST3-210ENST00000551160 KLHDC4Q8TBB5 520 aa12.87□□□□□ -0.35
BEST3-210ENST00000551160 PRKRIP1Q9H875 184 aaPredicted RBP12.87□□□□□ -0.35
BEST3-210ENST00000551160 OGDHLQ9ULD0 1010 aa12.87□□□□□ -0.35
BEST3-210ENST00000551160 AGTPBP1Q9UPW5 1226 aa12.87□□□□□ -0.35
BEST3-210ENST00000551160 ALDH1L1O75891 902 aa12.86□□□□□ -0.35
BEST3-210ENST00000551160 NBPF7P0C2Y1 421 aaPredicted RBP12.86□□□□□ -0.35
BEST3-210ENST00000551160 FGFR2P21802 821 aa12.86□□□□□ -0.35
BEST3-210ENST00000551160 MDM2Q00987 491 aaPredicted RBP12.86□□□□□ -0.35
BEST3-210ENST00000551160 PUM3Q15397 648 aaKnown RBP12.86□□□□□ -0.35
BEST3-210ENST00000551160 WDR66Q8TBY9 1149 aa12.86□□□□□ -0.35
BEST3-210ENST00000551160 HMX1Q9NP08 348 aaPredicted RBP12.86□□□□□ -0.35
BEST3-210ENST00000551160 GJD2Q9UKL4 321 aa12.86□□□□□ -0.35
BEST3-210ENST00000551160 IL16Q14005 1332 aa12.86□□□□□ -0.35
BEST3-210ENST00000551160 KIF16BQ96L93 1317 aa12.86□□□□□ -0.35
BEST3-210ENST00000551160 POTEB2H3BUK9 544 aa12.85□□□□□ -0.35
BEST3-210ENST00000551160 IFIT1P09914 478 aaKnown RBP12.85□□□□□ -0.35
BEST3-210ENST00000551160 RGS3P49796 1198 aa12.85□□□□□ -0.35
BEST3-210ENST00000551160 EXOSC9Q06265 439 aaKnown RBP12.85□□□□□ -0.35
BEST3-210ENST00000551160 RABL6Q3YEC7 729 aaPredicted RBP12.85□□□□□ -0.35
BEST3-210ENST00000551160 TRIB2Q92519 343 aa12.85□□□□□ -0.35
BEST3-210ENST00000551160 SRCIN1Q9C0H9 1055 aa12.85□□□□□ -0.35
BEST3-210ENST00000551160 SPTBN5Q9NRC6 3674 aaKnown RBP12.85□□□□□ -0.35
BEST3-210ENST00000551160 MGAMO43451 1857 aa12.85□□□□□ -0.35
BEST3-210ENST00000551160 RFX7Q2KHR2 1363 aa12.84□□□□□ -0.35
BEST3-210ENST00000551160 ZEB1P37275 1124 aaPredicted RBP12.84□□□□□ -0.35
BEST3-210ENST00000551160 LRRC26Q2I0M4 334 aa12.84□□□□□ -0.35
BEST3-210ENST00000551160 FAM109BQ6ICB4 259 aaPredicted RBP12.84□□□□□ -0.35
BEST3-210ENST00000551160 PRDM6Q9NQX0 595 aa12.84□□□□□ -0.35
BEST3-210ENST00000551160 PNMA3Q9UL41 463 aa12.84□□□□□ -0.35
BEST3-210ENST00000551160 LRRFIP2Q9Y608 721 aaKnown RBP12.84□□□□□ -0.35
BEST3-210ENST00000551160 DDTLA6NHG4 134 aaPredicted RBP12.83□□□□□ -0.36
BEST3-210ENST00000551160 CTNND1O60716 968 aaKnown RBP12.83□□□□□ -0.36
BEST3-210ENST00000551160 COL6A1P12109 1028 aa12.83□□□□□ -0.36
BEST3-210ENST00000551160 PRKAR2AP13861 404 aaKnown RBP12.83□□□□□ -0.36
BEST3-210ENST00000551160 MAP3K21Q5TCX8 1036 aa12.83□□□□□ -0.36
BEST3-210ENST00000551160 ZSCAN29Q8IWY8 852 aaPredicted RBP12.83□□□□□ -0.36
BEST3-210ENST00000551160 DDX4Q9NQI0 724 aaKnown RBP12.83□□□□□ -0.36
BEST3-210ENST00000551160 COL2A1P02458 1487 aaPredicted RBP12.83□□□□□ -0.36
BEST3-210ENST00000551160 UTYO14607 1347 aa12.83□□□□□ -0.36
BEST3-210ENST00000551160 DDX60LQ5H9U9 1706 aaKnown RBP12.82□□□□□ -0.36
BEST3-210ENST00000551160 PEX10O60683 326 aa12.82□□□□□ -0.36
BEST3-210ENST00000551160 ENTPD3O75355 529 aa12.82□□□□□ -0.36
BEST3-210ENST00000551160 LDHBP07195 334 aaKnown RBP12.82□□□□□ -0.36
BEST3-210ENST00000551160 SLC5A1P13866 664 aa12.82□□□□□ -0.36
BEST3-210ENST00000551160 CYP2B6P20813 491 aa12.82□□□□□ -0.36
BEST3-210ENST00000551160 MAP3K10Q02779 954 aa12.82□□□□□ -0.36
BEST3-210ENST00000551160 IDI2Q9BXS1 227 aa12.82□□□□□ -0.36
BEST3-210ENST00000551160 FAM196BA6NMK8 535 aa12.81□□□□□ -0.36
BEST3-210ENST00000551160 GCLCP48506 637 aaPredicted RBP12.81□□□□□ -0.36
BEST3-210ENST00000551160 SPP2Q13103 211 aa12.81□□□□□ -0.36
BEST3-210ENST00000551160 PICALMQ13492 652 aa12.81□□□□□ -0.36
BEST3-210ENST00000551160 CCDC184Q52MB2 194 aa12.81□□□□□ -0.36
BEST3-210ENST00000551160 PROCA1Q8NCQ7 364 aaPredicted RBP12.81□□□□□ -0.36
BEST3-210ENST00000551160 LPIN2Q92539 896 aa12.81□□□□□ -0.36
BEST3-210ENST00000551160 ASCC2Q9H1I8 757 aaPredicted RBP12.81□□□□□ -0.36
BEST3-210ENST00000551160 HMGCS2P54868 508 aa12.8□□□□□ -0.36
BEST3-210ENST00000551160 ZNF697Q5TEC3 545 aa12.8□□□□□ -0.36
BEST3-210ENST00000551160 MAFAQ8NHW3 353 aaPredicted RBP12.8□□□□□ -0.36
BEST3-210ENST00000551160 CDX2Q99626 313 aaPredicted RBP12.8□□□□□ -0.36
BEST3-210ENST00000551160 GAKO14976 1311 aa12.8□□□□□ -0.36
BEST3-210ENST00000551160 DOCK3Q8IZD9 2030 aa12.79□□□□□ -0.36
BEST3-210ENST00000551160 CCND3P30281 292 aaPredicted RBP12.79□□□□□ -0.36
BEST3-210ENST00000551160 CACNB2Q08289 660 aaPredicted RBP12.79□□□□□ -0.36
BEST3-210ENST00000551160 LHX8Q68G74 356 aa12.79□□□□□ -0.36
BEST3-210ENST00000551160 SALL2Q9Y467 1007 aaPredicted RBP12.79□□□□□ -0.36
BEST3-210ENST00000551160 SALL1Q9NSC2 1324 aa12.79□□□□□ -0.36
BEST3-210ENST00000551160 EYA2O00167 538 aa12.78□□□□□ -0.36
BEST3-210ENST00000551160 ZKSCAN1P17029 563 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms