RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 ZNF341Q9BYN7 854 aa18.74■□□□□ 0.59
PRPF40B-211ENST00000551063 BOLA2Q9H3K6 86 aa18.74■□□□□ 0.59
PRPF40B-211ENST00000551063 DDX4Q9NQI0 724 aaKnown RBP18.74■□□□□ 0.59
PRPF40B-211ENST00000551063 AATFQ9NY61 560 aaKnown RBP eCLIP18.74■□□□□ 0.59
PRPF40B-211ENST00000551063 ATRNL1Q5VV63 1379 aa18.73■□□□□ 0.59
PRPF40B-211ENST00000551063 GOLIM4O00461 696 aa18.73■□□□□ 0.59
PRPF40B-211ENST00000551063 ZBTB48P10074 688 aaPredicted RBP18.73■□□□□ 0.59
PRPF40B-211ENST00000551063 CYP7A1P22680 504 aa18.73■□□□□ 0.59
PRPF40B-211ENST00000551063 PICALMQ13492 652 aa18.73■□□□□ 0.59
PRPF40B-211ENST00000551063 SPRYD7Q5W111 196 aa18.73■□□□□ 0.59
PRPF40B-211ENST00000551063 TEX11Q8IYF3 940 aa18.73■□□□□ 0.59
PRPF40B-211ENST00000551063 MAGEB6Q8N7X4 407 aa18.73■□□□□ 0.59
PRPF40B-211ENST00000551063 SLC10A4Q96EP9 437 aa18.73■□□□□ 0.59
PRPF40B-211ENST00000551063 CLMNQ96JQ2 1002 aa18.73■□□□□ 0.59
PRPF40B-211ENST00000551063 PAG1Q9NWQ8 432 aa18.73■□□□□ 0.59
PRPF40B-211ENST00000551063 RNF186Q9NXI6 227 aa18.73■□□□□ 0.59
PRPF40B-211ENST00000551063 TRPA1O75762 1119 aa18.72■□□□□ 0.59
PRPF40B-211ENST00000551063 DGKZQ13574 1117 aa18.72■□□□□ 0.59
PRPF40B-211ENST00000551063 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.72■□□□□ 0.59
PRPF40B-211ENST00000551063 ZFPM1Q8IX07 1006 aa18.72■□□□□ 0.59
PRPF40B-211ENST00000551063 SH3RF3Q8TEJ3 882 aaPredicted RBP18.72■□□□□ 0.59
PRPF40B-211ENST00000551063 MCOLN1Q9GZU1 580 aa18.72■□□□□ 0.59
PRPF40B-211ENST00000551063 CSADQ9Y600 493 aa18.72■□□□□ 0.59
PRPF40B-211ENST00000551063 VGLL4Q14135 290 aa18.71■□□□□ 0.59
PRPF40B-211ENST00000551063 ZSCAN29Q8IWY8 852 aaPredicted RBP18.71■□□□□ 0.59
PRPF40B-211ENST00000551063 WNK4Q96J92 1243 aa18.71■□□□□ 0.59
PRPF40B-211ENST00000551063 WRNIP1Q96S55 665 aa18.71■□□□□ 0.59
PRPF40B-211ENST00000551063 OSBPL5Q9H0X9 879 aaPredicted RBP18.71■□□□□ 0.59
PRPF40B-211ENST00000551063 ZBTB47Q9UFB7 747 aaPredicted RBP18.71■□□□□ 0.59
PRPF40B-211ENST00000551063 TTC41PQ6P2S7 1318 aa18.71■□□□□ 0.59
PRPF40B-211ENST00000551063 DOCK2Q92608 1830 aa18.7■□□□□ 0.58
PRPF40B-211ENST00000551063 PDE6AP16499 860 aa18.7■□□□□ 0.58
PRPF40B-211ENST00000551063 SREBF2Q12772 1141 aa18.7■□□□□ 0.58
PRPF40B-211ENST00000551063 SH3BP5LQ7L8J4 393 aa18.7■□□□□ 0.58
PRPF40B-211ENST00000551063 RWDD1Q9H446 243 aaPredicted RBP18.7■□□□□ 0.58
PRPF40B-211ENST00000551063 CASP8AP2Q9UKL3 1982 aa18.7■□□□□ 0.58
PRPF40B-211ENST00000551063 DDTLA6NHG4 134 aaPredicted RBP18.69■□□□□ 0.58
PRPF40B-211ENST00000551063 SLC9C2Q5TAH2 1124 aa18.69■□□□□ 0.58
PRPF40B-211ENST00000551063 MIGA2Q7L4E1 593 aa18.69■□□□□ 0.58
PRPF40B-211ENST00000551063 EDC3Q96F86 508 aaKnown RBP18.69■□□□□ 0.58
PRPF40B-211ENST00000551063 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.69■□□□□ 0.58
PRPF40B-211ENST00000551063 ELP3Q9H9T3 547 aa18.69■□□□□ 0.58
PRPF40B-211ENST00000551063 ZNF112Q9UJU3 913 aa18.69■□□□□ 0.58
PRPF40B-211ENST00000551063 MANSC4A6NHS7 340 aaPredicted RBP18.68■□□□□ 0.58
PRPF40B-211ENST00000551063 SPDYE5A6NIY4 337 aa18.68■□□□□ 0.58
PRPF40B-211ENST00000551063 ERC2O15083 957 aa18.68■□□□□ 0.58
PRPF40B-211ENST00000551063 DYNLL1P63167 89 aaKnown RBP18.68■□□□□ 0.58
PRPF40B-211ENST00000551063 MAP3K10Q02779 954 aa18.68■□□□□ 0.58
PRPF40B-211ENST00000551063 SMC5Q8IY18 1101 aa18.68■□□□□ 0.58
PRPF40B-211ENST00000551063 MIGA1Q8NAN2 632 aa18.68■□□□□ 0.58
PRPF40B-211ENST00000551063 DHX36Q9H2U1 1008 aaKnown RBP18.68■□□□□ 0.58
PRPF40B-211ENST00000551063 SNCAIPQ9Y6H5 919 aa18.68■□□□□ 0.58
PRPF40B-211ENST00000551063 FLT1P17948 1338 aa18.68■□□□□ 0.58
PRPF40B-211ENST00000551063 TCRBV5S4A2TA0A5A2 114 aa18.67■□□□□ 0.58
PRPF40B-211ENST00000551063 TBC1D12O60347 775 aa18.67■□□□□ 0.58
PRPF40B-211ENST00000551063 ADD2P35612 726 aa18.67■□□□□ 0.58
PRPF40B-211ENST00000551063 TM4SF4P48230 202 aa18.67■□□□□ 0.58
PRPF40B-211ENST00000551063 MKRN3Q13064 507 aaKnown RBP18.67■□□□□ 0.58
PRPF40B-211ENST00000551063 NOL9Q5SY16 702 aaKnown RBP18.67■□□□□ 0.58
PRPF40B-211ENST00000551063 ANKRD45Q5TZF3 282 aa18.67■□□□□ 0.58
PRPF40B-211ENST00000551063 TGFBRAP1Q8WUH2 860 aa18.67■□□□□ 0.58
PRPF40B-211ENST00000551063 OPTNQ96CV9 577 aa18.67■□□□□ 0.58
PRPF40B-211ENST00000551063 RIOK1Q9BRS2 568 aaKnown RBP18.67■□□□□ 0.58
PRPF40B-211ENST00000551063 SALL3Q9BXA9 1300 aa18.67■□□□□ 0.58
PRPF40B-211ENST00000551063 ZNF532Q9HCE3 1301 aa18.67■□□□□ 0.58
PRPF40B-211ENST00000551063 OTOFQ9HC10 1997 aa18.66■□□□□ 0.58
PRPF40B-211ENST00000551063 GLRX3O76003 335 aaKnown RBP18.66■□□□□ 0.58
PRPF40B-211ENST00000551063 MX1P20591 662 aa18.66■□□□□ 0.58
PRPF40B-211ENST00000551063 GJA5P36382 358 aa18.66■□□□□ 0.58
PRPF40B-211ENST00000551063 RGS19P49795 217 aa18.66■□□□□ 0.58
PRPF40B-211ENST00000551063 INHBEP58166 350 aa18.66■□□□□ 0.58
PRPF40B-211ENST00000551063 UBE3CQ15386 1083 aa18.66■□□□□ 0.58
PRPF40B-211ENST00000551063 TSHZ3Q63HK5 1081 aa18.66■□□□□ 0.58
PRPF40B-211ENST00000551063 ZSCAN25Q6NSZ9 544 aa18.66■□□□□ 0.58
PRPF40B-211ENST00000551063 ERO1BQ86YB8 467 aa18.66■□□□□ 0.58
PRPF40B-211ENST00000551063 MAPKAPK5Q8IW41 473 aa18.66■□□□□ 0.58
PRPF40B-211ENST00000551063 OTUD7AQ8TE49 926 aaPredicted RBP18.66■□□□□ 0.58
PRPF40B-211ENST00000551063 MAGEB6P1A0A0J9YX57 407 aa18.65■□□□□ 0.58
PRPF40B-211ENST00000551063 INPP5BP32019 993 aa18.65■□□□□ 0.58
PRPF40B-211ENST00000551063 PI4K2BQ8TCG2 481 aa18.65■□□□□ 0.58
PRPF40B-211ENST00000551063 ZKSCAN4Q969J2 545 aaPredicted RBP18.65■□□□□ 0.58
PRPF40B-211ENST00000551063 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.65■□□□□ 0.58
PRPF40B-211ENST00000551063 PHF20L1A8MW92 1017 aa18.64■□□□□ 0.57
PRPF40B-211ENST00000551063 MLLT1Q03111 559 aaPredicted RBP18.64■□□□□ 0.57
PRPF40B-211ENST00000551063 KBTBD3Q8NAB2 608 aa18.64■□□□□ 0.57
PRPF40B-211ENST00000551063 OTUD5Q96G74 571 aa18.64■□□□□ 0.57
PRPF40B-211ENST00000551063 PI4KBQ9UBF8 816 aa18.64■□□□□ 0.57
PRPF40B-211ENST00000551063 HERC5Q9UII4 1024 aaKnown RBP18.64■□□□□ 0.57
PRPF40B-211ENST00000551063 MYO5AQ9Y4I1 1855 aaKnown RBP18.63■□□□□ 0.57
PRPF40B-211ENST00000551063 TESPA1A2RU30 521 aaPredicted RBP18.63■□□□□ 0.57
PRPF40B-211ENST00000551063 ALDH1A1P00352 501 aa18.63■□□□□ 0.57
PRPF40B-211ENST00000551063 IGHDP01880 384 aa18.63■□□□□ 0.57
PRPF40B-211ENST00000551063 USP5P45974 858 aa18.63■□□□□ 0.57
PRPF40B-211ENST00000551063 PPATQ06203 517 aa18.63■□□□□ 0.57
PRPF40B-211ENST00000551063 PPIL2Q13356 520 aa18.63■□□□□ 0.57
PRPF40B-211ENST00000551063 SCYL3Q8IZE3 742 aa18.63■□□□□ 0.57
PRPF40B-211ENST00000551063 CNKSR2Q8WXI2 1034 aa18.63■□□□□ 0.57
PRPF40B-211ENST00000551063 CRNKL1Q9BZJ0 848 aaKnown RBP18.63■□□□□ 0.57
PRPF40B-211ENST00000551063 HLA-DOAP06340 250 aa18.62■□□□□ 0.57
PRPF40B-211ENST00000551063 GTF2A2P52657 109 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms