RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, human

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1A-208	ENST00000550811	ECM29	Q5VYK3	1845 aa		11.46	□□□□□ -0.58
TUBA1A-208	ENST00000550811	MROH7-TTC4	A0A0A0MT08	1334 aa		11.45	□□□□□ -0.58
TUBA1A-208	ENST00000550811	RAD50	Q92878	1312 aa		11.45	□□□□□ -0.58
TUBA1A-208	ENST00000550811	TCRBV5S4A2T	A0A5A2	114 aa		11.45	□□□□□ -0.58
TUBA1A-208	ENST00000550811	C2orf72	A6NCS6	295 aa		11.45	□□□□□ -0.58
TUBA1A-208	ENST00000550811	KIF3C	O14782	793 aa		11.45	□□□□□ -0.58
TUBA1A-208	ENST00000550811	CYP7A1	P22680	504 aa		11.45	□□□□□ -0.58
TUBA1A-208	ENST00000550811	CLCN1	P35523	988 aa		11.45	□□□□□ -0.58
TUBA1A-208	ENST00000550811	GMPS	P49915	693 aa	Predicted RBP	11.45	□□□□□ -0.58
TUBA1A-208	ENST00000550811	NMI	Q13287	307 aa	Predicted RBP	11.45	□□□□□ -0.58
TUBA1A-208	ENST00000550811	DIXDC1	Q155Q3	683 aa		11.45	□□□□□ -0.58
TUBA1A-208	ENST00000550811	SH3D19	Q5HYK7	790 aa		11.45	□□□□□ -0.58
TUBA1A-208	ENST00000550811	ZMYM1	Q5SVZ6	1142 aa		11.45	□□□□□ -0.58
TUBA1A-208	ENST00000550811	ZNF384	Q8TF68	577 aa		11.45	□□□□□ -0.58
TUBA1A-208	ENST00000550811	TEKT1	Q969V4	418 aa		11.45	□□□□□ -0.58
TUBA1A-208	ENST00000550811	HDAC9	Q9UKV0	1011 aa		11.45	□□□□□ -0.58
TUBA1A-208	ENST00000550811	WDR90	Q96KV7	1748 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	GAK	O14976	1311 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811		A0A0D9SFI3	127 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	CHGB	P05060	677 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	LDHC	P07864	332 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	USP17L8	P0C7I0	530 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	MMP14	P50281	582 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	SCNN1D	P51172	638 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	HDLBP	Q00341	1268 aa	Known RBP	11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	SLFNL1	Q499Z3	407 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	LCE2D	Q5TA82	110 aa	Predicted RBP	11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	DPY19L2	Q6NUT2	758 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	CWC27	Q6UX04	472 aa	Known RBP	11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	ADGRA1	Q86SQ6	560 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	OGFOD1	Q8N543	542 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	RUFY2	Q8WXA3	655 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	DPF2	Q92785	391 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	FAM163A	Q96GL9	167 aa	Predicted RBP	11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	FAM227B	Q96M60	508 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	NOL10	Q9BSC4	688 aa	Known RBP	11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	HELLS	Q9NRZ9	838 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	SERPINA10	Q9UK55	444 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	CDK5RAP2	Q96SN8	1893 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	SCN4A	P35499	1836 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	FOCAD	Q5VW36	1801 aa		11.44	□□□□□ -0.58
TUBA1A-208	ENST00000550811	NAV1	Q8NEY1	1877 aa		11.43	□□□□□ -0.58
TUBA1A-208	ENST00000550811	CRK	P46108	304 aa		11.43	□□□□□ -0.58
TUBA1A-208	ENST00000550811	PTGDR	Q13258	359 aa		11.43	□□□□□ -0.58
TUBA1A-208	ENST00000550811	HHIPL2	Q6UWX4	724 aa		11.43	□□□□□ -0.58
TUBA1A-208	ENST00000550811	MIGA1	Q8NAN2	632 aa		11.43	□□□□□ -0.58
TUBA1A-208	ENST00000550811	OXER1	Q8TDS5	423 aa		11.43	□□□□□ -0.58
TUBA1A-208	ENST00000550811	OSBP2	Q969R2	916 aa		11.43	□□□□□ -0.58
TUBA1A-208	ENST00000550811	AIDA	Q96BJ3	306 aa		11.43	□□□□□ -0.58
TUBA1A-208	ENST00000550811	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.43	□□□□□ -0.58
TUBA1A-208	ENST00000550811	DAGLA	Q9Y4D2	1042 aa		11.43	□□□□□ -0.58
TUBA1A-208	ENST00000550811	CCDC171	Q6TFL3	1326 aa		11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	MAGEB6P1	A0A0J9YX57	407 aa		11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	GLTPD2	A6NH11	291 aa		11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811		M0R2C6	588 aa		11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	DDN	O94850	711 aa	Predicted RBP	11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	MBD4	O95243	580 aa		11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	BAG3	O95817	575 aa		11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	LMOD1	P29536	600 aa	Predicted RBP	11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	BTD	P43251	543 aa		11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	RBM5	P52756	815 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	MFAP1	P55081	439 aa	Known RBP	11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	ZNF280A	P59817	542 aa	Predicted RBP	11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	CFAP100	Q494V2	611 aa		11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	C8orf34	Q49A92	452 aa		11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	MCMDC2	Q4G0Z9	681 aa		11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	CERS3	Q8IU89	383 aa		11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	ZDHHC15	Q96MV8	337 aa		11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	ESYT1	Q9BSJ8	1104 aa		11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	MRI	Q9BWK5	157 aa		11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	PUS7L	Q9H0K6	701 aa	Known RBP	11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	GPRC5D	Q9NZD1	345 aa		11.42	□□□□□ -0.58
TUBA1A-208	ENST00000550811	DDX60L	Q5H9U9	1706 aa	Known RBP	11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811	GPR75-ASB3	A0A0A6YYF3	556 aa		11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811	SHTN1	A0MZ66	631 aa		11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811		H7C1D1	291 aa		11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811	SGSM2	O43147	1006 aa		11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811	GPAA1	O43292	621 aa		11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811	RAD21	O60216	631 aa		11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811	LCORL	Q8N3X6	602 aa		11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811	SEC62	Q99442	399 aa	Known RBP	11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811	RIOK1	Q9BRS2	568 aa	Known RBP	11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811	IL25	Q9H293	177 aa		11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811	OCEL1	Q9H607	264 aa		11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811	MYOZ2	Q9NPC6	264 aa		11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811	CNOT7	Q9UIV1	285 aa	Known RBP	11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811	LAMB1	P07942	1786 aa		11.41	□□□□□ -0.58
TUBA1A-208	ENST00000550811	EIF5B	O60841	1220 aa	Known RBP	11.4	□□□□□ -0.58
TUBA1A-208	ENST00000550811	PLCG2	P16885	1265 aa		11.4	□□□□□ -0.58
TUBA1A-208	ENST00000550811	DLGAP5	Q15398	846 aa		11.4	□□□□□ -0.58
TUBA1A-208	ENST00000550811	SKIV2L	Q15477	1246 aa	Known RBP	11.4	□□□□□ -0.58
TUBA1A-208	ENST00000550811	KIF4B	Q2VIQ3	1234 aa		11.4	□□□□□ -0.58
TUBA1A-208	ENST00000550811	IER5L	Q5T953	404 aa		11.4	□□□□□ -0.58
TUBA1A-208	ENST00000550811	CCDC129	Q6ZRS4	1044 aa		11.4	□□□□□ -0.58
TUBA1A-208	ENST00000550811	MTMR14	Q8NCE2	650 aa		11.4	□□□□□ -0.58
TUBA1A-208	ENST00000550811	ARMT1	Q9H993	441 aa		11.4	□□□□□ -0.58
TUBA1A-208	ENST00000550811	LAMA4	Q16363	1823 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms