RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 ARID5BQ14865 1188 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 GLIPR1L2Q4G1C9 344 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 DHX40Q8IX18 779 aaKnown RBP16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 CHMP4CQ96CF2 233 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 LRRC4BQ9NT99 713 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 POLR3EQ9NVU0 708 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 FAM13BQ9NYF5 915 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 WDR19Q8NEZ3 1342 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 BIN1O00499 593 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 TERF1P54274 439 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 HSP90AA2PQ14568 343 aaPredicted RBP16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 AXDND1Q5T1B0 1012 aaPredicted RBP16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 ANO1Q5XXA6 986 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 ISM2Q6H9L7 571 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 VPS37DQ86XT2 251 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 CCDC24Q8N4L8 307 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 SDR42E1Q8WUS8 393 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 SPTLC3Q9NUV7 552 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 LRP5O75197 1615 aa16.47■□□□□ 0.23
CALCOCO1-218ENST00000550804 CTAGE5O15320 804 aa16.47■□□□□ 0.23
CALCOCO1-218ENST00000550804 ZPR1O75312 459 aa16.47■□□□□ 0.23
CALCOCO1-218ENST00000550804 ALX1Q15699 326 aa16.47■□□□□ 0.23
CALCOCO1-218ENST00000550804 PODXL2Q9NZ53 605 aa16.47■□□□□ 0.23
CALCOCO1-218ENST00000550804 GOLGA6L19H0YKK7 550 aa16.47■□□□□ 0.23
CALCOCO1-218ENST00000550804 TDO2P48775 406 aa16.47■□□□□ 0.23
CALCOCO1-218ENST00000550804 STX1AQ16623 288 aa16.47■□□□□ 0.23
CALCOCO1-218ENST00000550804 AKNAD1Q5T1N1 836 aa16.47■□□□□ 0.23
CALCOCO1-218ENST00000550804 MFSD6Q6ZSS7 791 aa16.47■□□□□ 0.23
CALCOCO1-218ENST00000550804 CLIP2Q9UDT6 1046 aa16.47■□□□□ 0.23
CALCOCO1-218ENST00000550804 A0A1W2PQ27 194 aa16.46■□□□□ 0.23
CALCOCO1-218ENST00000550804 A0A1W2PQ64 194 aa16.46■□□□□ 0.23
CALCOCO1-218ENST00000550804 A0A1W2PQD8 194 aa16.46■□□□□ 0.23
CALCOCO1-218ENST00000550804 GOLGA8AA7E2F4 631 aa16.46■□□□□ 0.23
CALCOCO1-218ENST00000550804 GOLGA6L6A8MZA4 724 aa16.46■□□□□ 0.23
CALCOCO1-218ENST00000550804 ZNF202O95125 648 aa16.46■□□□□ 0.23
CALCOCO1-218ENST00000550804 IARSP41252 1262 aaKnown RBP16.46■□□□□ 0.23
CALCOCO1-218ENST00000550804 SLC10A5Q5PT55 438 aa16.46■□□□□ 0.23
CALCOCO1-218ENST00000550804 BRAPQ7Z569 592 aa16.46■□□□□ 0.23
CALCOCO1-218ENST00000550804 KCNG4Q8TDN1 519 aa16.46■□□□□ 0.23
CALCOCO1-218ENST00000550804 TMEM87BQ96K49 555 aa16.46■□□□□ 0.23
CALCOCO1-218ENST00000550804 CLIC6Q96NY7 704 aa16.46■□□□□ 0.23
CALCOCO1-218ENST00000550804 SLC26A6Q9BXS9 759 aa16.46■□□□□ 0.23
CALCOCO1-218ENST00000550804 SLC12A7Q9Y666 1083 aa16.46■□□□□ 0.23
CALCOCO1-218ENST00000550804 MYO5AQ9Y4I1 1855 aaKnown RBP16.46■□□□□ 0.23
CALCOCO1-218ENST00000550804 BECN2A8MW95 431 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 SF3B3Q15393 1217 aaKnown RBP16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 DPCR1Q3MIW9 517 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 CACTINQ8WUQ7 758 aaKnown RBP16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 SETDB2Q96T68 719 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 ZMYND15Q9H091 742 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 SCN7AQ01118 1682 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 TAF1LQ8IZX4 1826 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 COL4A1P02462 1669 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 MINDY4BA8MYZ0 360 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 YEATS4O95619 227 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 CYP7A1P22680 504 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 FAM196AQ6ZSG2 479 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 KRT27Q7Z3Y8 459 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 SGMS1Q86VZ5 419 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 AOPEPQ8N6M6 819 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 KIAA1468Q9P260 1216 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 LAMB2P55268 1798 aa16.45■□□□□ 0.22
CALCOCO1-218ENST00000550804 PFKFB1P16118 471 aa16.44■□□□□ 0.22
CALCOCO1-218ENST00000550804 SLC39A14Q15043 492 aa16.44■□□□□ 0.22
CALCOCO1-218ENST00000550804 CYP2D7A0A087X1C5 515 aa16.44■□□□□ 0.22
CALCOCO1-218ENST00000550804 CCDC69A6NI79 296 aa16.44■□□□□ 0.22
CALCOCO1-218ENST00000550804 GTF2E1P29083 439 aaPredicted RBP16.44■□□□□ 0.22
CALCOCO1-218ENST00000550804 GNL2Q13823 731 aaKnown RBP16.44■□□□□ 0.22
CALCOCO1-218ENST00000550804 TRAPPC3LQ5T215 181 aa16.44■□□□□ 0.22
CALCOCO1-218ENST00000550804 ANO10Q9NW15 660 aa16.44■□□□□ 0.22
CALCOCO1-218ENST00000550804 RAI14Q9P0K7 980 aa16.44■□□□□ 0.22
CALCOCO1-218ENST00000550804 KCNJ14Q9UNX9 436 aa16.44■□□□□ 0.22
CALCOCO1-218ENST00000550804 MROH7-TTC4A0A0A0MT08 1334 aa16.44■□□□□ 0.22
CALCOCO1-218ENST00000550804 KLRK1P26718 216 aa16.43■□□□□ 0.22
CALCOCO1-218ENST00000550804 LIFRP42702 1097 aa16.43■□□□□ 0.22
CALCOCO1-218ENST00000550804 EVX2Q03828 476 aa16.43■□□□□ 0.22
CALCOCO1-218ENST00000550804 SPECC1Q5M775 1068 aa16.43■□□□□ 0.22
CALCOCO1-218ENST00000550804 CELF1Q92879 486 aaKnown RBP16.43■□□□□ 0.22
CALCOCO1-218ENST00000550804 C4BP0C0L5 1744 aa16.43■□□□□ 0.22
CALCOCO1-218ENST00000550804 BTBD18B2RXH4 712 aa16.43■□□□□ 0.22
CALCOCO1-218ENST00000550804 RFC4P35249 363 aa16.43■□□□□ 0.22
CALCOCO1-218ENST00000550804 DYNLL1P63167 89 aaKnown RBP16.43■□□□□ 0.22
CALCOCO1-218ENST00000550804 PTPAQ15257 358 aa16.43■□□□□ 0.22
CALCOCO1-218ENST00000550804 SHC4Q6S5L8 630 aa16.43■□□□□ 0.22
CALCOCO1-218ENST00000550804 MAP3K14Q99558 947 aa16.43■□□□□ 0.22
CALCOCO1-218ENST00000550804 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.43■□□□□ 0.22
CALCOCO1-218ENST00000550804 NYXQ9GZU5 481 aa16.43■□□□□ 0.22
CALCOCO1-218ENST00000550804 CDKL5O76039 1030 aa16.42■□□□□ 0.22
CALCOCO1-218ENST00000550804 TRIM37O94972 964 aa16.42■□□□□ 0.22
CALCOCO1-218ENST00000550804 CAVIN2O95810 425 aa16.42■□□□□ 0.22
CALCOCO1-218ENST00000550804 CMA1P23946 247 aa16.42■□□□□ 0.22
CALCOCO1-218ENST00000550804 NBPF5PQ86XG9 351 aaPredicted RBP16.42■□□□□ 0.22
CALCOCO1-218ENST00000550804 ZNF384Q8TF68 577 aa16.42■□□□□ 0.22
CALCOCO1-218ENST00000550804 NUP133Q8WUM0 1156 aa16.42■□□□□ 0.22
CALCOCO1-218ENST00000550804 CDC5LQ99459 802 aaKnown RBP16.42■□□□□ 0.22
CALCOCO1-218ENST00000550804 MINPP1Q9UNW1 487 aa16.42■□□□□ 0.22
CALCOCO1-218ENST00000550804 TPM3P06753 285 aa16.42■□□□□ 0.22
CALCOCO1-218ENST00000550804 SSRP1Q08945 709 aaKnown RBP16.42■□□□□ 0.22
CALCOCO1-218ENST00000550804 CPLX2Q6PUV4 134 aaKnown RBP16.42■□□□□ 0.22
CALCOCO1-218ENST00000550804 FILIP1Q7Z7B0 1213 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms