RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 SCYL3Q8IZE3 742 aa26.86■■□□□ 1.89
SMARCC2-210ENST00000550519 TRIM47Q96LD4 638 aa26.86■■□□□ 1.89
SMARCC2-210ENST00000550519 DDX4Q9NQI0 724 aaKnown RBP26.86■■□□□ 1.89
SMARCC2-210ENST00000550519 AK9Q5TCS8 1911 aa26.86■■□□□ 1.89
SMARCC2-210ENST00000550519 BTDP43251 543 aa26.85■■□□□ 1.89
SMARCC2-210ENST00000550519 PSMC4P43686 418 aa26.85■■□□□ 1.89
SMARCC2-210ENST00000550519 SRRDQ9UH36 339 aa26.85■■□□□ 1.89
SMARCC2-210ENST00000550519 DDTLA6NHG4 134 aaPredicted RBP26.84■■□□□ 1.89
SMARCC2-210ENST00000550519 PTPRAP18433 802 aa26.84■■□□□ 1.89
SMARCC2-210ENST00000550519 ZSCAN29Q8IWY8 852 aaPredicted RBP26.84■■□□□ 1.89
SMARCC2-210ENST00000550519 PARK7Q99497 189 aaKnown RBP26.84■■□□□ 1.89
SMARCC2-210ENST00000550519 ZHX2Q9Y6X8 837 aa26.84■■□□□ 1.89
SMARCC2-210ENST00000550519 MYH2Q9UKX2 1941 aa26.84■■□□□ 1.89
SMARCC2-210ENST00000550519 MROH7-TTC4A0A0A0MT08 1334 aa26.84■■□□□ 1.89
SMARCC2-210ENST00000550519 GPR75-ASB3A0A0A6YYF3 556 aa26.83■■□□□ 1.89
SMARCC2-210ENST00000550519 IPO8O15397 1037 aaKnown RBP26.83■■□□□ 1.89
SMARCC2-210ENST00000550519 ECM2O94769 699 aaPredicted RBP26.83■■□□□ 1.89
SMARCC2-210ENST00000550519 MYCP01106 439 aaPredicted RBP26.83■■□□□ 1.89
SMARCC2-210ENST00000550519 TRIM27P14373 513 aa26.83■■□□□ 1.89
SMARCC2-210ENST00000550519 MECOMQ03112 1051 aa26.83■■□□□ 1.89
SMARCC2-210ENST00000550519 ERICH6Q7L0X2 663 aa26.83■■□□□ 1.89
SMARCC2-210ENST00000550519 ZNF384Q8TF68 577 aa26.83■■□□□ 1.89
SMARCC2-210ENST00000550519 PICK1Q9NRD5 415 aa26.83■■□□□ 1.89
SMARCC2-210ENST00000550519 A0A0G2JLL6 359 aaPredicted RBP26.82■■□□□ 1.88
SMARCC2-210ENST00000550519 SLURP2P0DP57 97 aa26.82■■□□□ 1.88
SMARCC2-210ENST00000550519 BCRP11274 1271 aa26.82■■□□□ 1.88
SMARCC2-210ENST00000550519 OSBPP22059 807 aa26.82■■□□□ 1.88
SMARCC2-210ENST00000550519 HOXD10P28358 340 aa26.82■■□□□ 1.88
SMARCC2-210ENST00000550519 RHBDL3P58872 404 aa26.82■■□□□ 1.88
SMARCC2-210ENST00000550519 PRRT2Q7Z6L0 340 aaPredicted RBP26.82■■□□□ 1.88
SMARCC2-210ENST00000550519 NEUROD6Q96NK8 337 aa26.82■■□□□ 1.88
SMARCC2-210ENST00000550519 HMG20BQ9P0W2 317 aa26.82■■□□□ 1.88
SMARCC2-210ENST00000550519 AFG3L2Q9Y4W6 797 aa26.82■■□□□ 1.88
SMARCC2-210ENST00000550519 CTNND1O60716 968 aaKnown RBP26.81■■□□□ 1.88
SMARCC2-210ENST00000550519 FMNL1O95466 1100 aaPredicted RBP26.81■■□□□ 1.88
SMARCC2-210ENST00000550519 GNAI2P04899 355 aa26.81■■□□□ 1.88
SMARCC2-210ENST00000550519 CYP2C8P10632 490 aa26.81■■□□□ 1.88
SMARCC2-210ENST00000550519 PICALMQ13492 652 aa26.81■■□□□ 1.88
SMARCC2-210ENST00000550519 ATF7IPQ6VMQ6 1270 aa26.81■■□□□ 1.88
SMARCC2-210ENST00000550519 FASTKD5Q7L8L6 764 aaKnown RBP26.81■■□□□ 1.88
SMARCC2-210ENST00000550519 TNNQ9UQP3 1299 aa26.81■■□□□ 1.88
SMARCC2-210ENST00000550519 NPM3O75607 178 aaKnown RBP26.8■■□□□ 1.88
SMARCC2-210ENST00000550519 DOCK2Q92608 1830 aa26.79■■□□□ 1.88
SMARCC2-210ENST00000550519 PNMA6EA0A0J9YXQ4 647 aa26.79■■□□□ 1.88
SMARCC2-210ENST00000550519 BCAR3O75815 825 aa26.79■■□□□ 1.88
SMARCC2-210ENST00000550519 HABP4Q5JVS0 413 aaKnown RBP26.79■■□□□ 1.88
SMARCC2-210ENST00000550519 PI16Q6UXB8 463 aa26.79■■□□□ 1.88
SMARCC2-210ENST00000550519 SPATA5Q8NB90 893 aa26.79■■□□□ 1.88
SMARCC2-210ENST00000550519 TBC1D12O60347 775 aa26.78■■□□□ 1.88
SMARCC2-210ENST00000550519 ARID4AP29374 1257 aaPredicted RBP26.78■■□□□ 1.88
SMARCC2-210ENST00000550519 NSUN4Q96CB9 384 aaKnown RBP26.78■■□□□ 1.88
SMARCC2-210ENST00000550519 SLC45A1Q9Y2W3 748 aa26.78■■□□□ 1.88
SMARCC2-210ENST00000550519 MYPNQ86TC9 1320 aa26.77■■□□□ 1.88
SMARCC2-210ENST00000550519 MAP4K4O95819 1239 aaPredicted RBP26.77■■□□□ 1.88
SMARCC2-210ENST00000550519 LDHCP07864 332 aa26.77■■□□□ 1.88
SMARCC2-210ENST00000550519 GRK4P32298 578 aa26.77■■□□□ 1.88
SMARCC2-210ENST00000550519 MTFR1Q15390 333 aa26.77■■□□□ 1.88
SMARCC2-210ENST00000550519 GORABQ5T7V8 394 aa26.77■■□□□ 1.88
SMARCC2-210ENST00000550519 TBC1D9Q6ZT07 1266 aa26.77■■□□□ 1.88
SMARCC2-210ENST00000550519 RAET1EQ8TD07 263 aa26.77■■□□□ 1.88
SMARCC2-210ENST00000550519 FRAT1Q92837 279 aaPredicted RBP26.77■■□□□ 1.88
SMARCC2-210ENST00000550519 GSTO1P78417 241 aa26.76■■□□□ 1.87
SMARCC2-210ENST00000550519 G3BP1Q13283 466 aaKnown RBP eCLIP26.76■■□□□ 1.87
SMARCC2-210ENST00000550519 CLUAP1Q96AJ1 413 aa26.76■■□□□ 1.87
SMARCC2-210ENST00000550519 FCGRTP55899 365 aa26.75■■□□□ 1.87
SMARCC2-210ENST00000550519 GADL1Q6ZQY3 521 aa26.75■■□□□ 1.87
SMARCC2-210ENST00000550519 MCAMP43121 646 aa26.74■■□□□ 1.87
SMARCC2-210ENST00000550519 PRKCZQ05513 592 aa26.74■■□□□ 1.87
SMARCC2-210ENST00000550519 SHISA4Q96DD7 197 aa26.74■■□□□ 1.87
SMARCC2-210ENST00000550519 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.74■■□□□ 1.87
SMARCC2-210ENST00000550519 TRIM75PA6NK02 468 aa26.73■■□□□ 1.87
SMARCC2-210ENST00000550519 CCDC84Q86UT8 332 aaPredicted RBP26.73■■□□□ 1.87
SMARCC2-210ENST00000550519 RAI14Q9P0K7 980 aa26.73■■□□□ 1.87
SMARCC2-210ENST00000550519 UQCRFS1P1P0C7P4 283 aa26.72■■□□□ 1.87
SMARCC2-210ENST00000550519 OSBPL5Q9H0X9 879 aaPredicted RBP26.72■■□□□ 1.87
SMARCC2-210ENST00000550519 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.72■■□□□ 1.87
SMARCC2-210ENST00000550519 COL2A1P02458 1487 aaPredicted RBP26.72■■□□□ 1.87
SMARCC2-210ENST00000550519 FAM196BA6NMK8 535 aa26.71■■□□□ 1.87
SMARCC2-210ENST00000550519 TMEM57Q8N5G2 664 aa26.71■■□□□ 1.87
SMARCC2-210ENST00000550519 NKX2-3Q8TAU0 364 aa26.71■■□□□ 1.87
SMARCC2-210ENST00000550519 GPR108Q9NPR9 543 aa26.71■■□□□ 1.87
SMARCC2-210ENST00000550519 GABRQQ9UN88 632 aa26.71■■□□□ 1.87
SMARCC2-210ENST00000550519 AGTPBP1Q9UPW5 1226 aa26.71■■□□□ 1.87
SMARCC2-210ENST00000550519 DOCK1Q14185 1865 aa26.7■■□□□ 1.87
SMARCC2-210ENST00000550519 GJB1P08034 283 aa26.7■■□□□ 1.86
SMARCC2-210ENST00000550519 CCL5P13501 91 aa26.7■■□□□ 1.86
SMARCC2-210ENST00000550519 POLA2Q14181 598 aa26.7■■□□□ 1.86
SMARCC2-210ENST00000550519 SLAIN1Q8ND83 568 aa26.7■■□□□ 1.86
SMARCC2-210ENST00000550519 LRP2BPQ9P2M1 347 aa26.7■■□□□ 1.86
SMARCC2-210ENST00000550519 GJA8P48165 433 aa26.69■■□□□ 1.86
SMARCC2-210ENST00000550519 ZKSCAN2Q63HK3 967 aa26.69■■□□□ 1.86
SMARCC2-210ENST00000550519 SMCR8Q8TEV9 937 aaPredicted RBP26.69■■□□□ 1.86
SMARCC2-210ENST00000550519 PHIPQ8WWQ0 1821 aa26.69■■□□□ 1.86
SMARCC2-210ENST00000550519 UBXN2AP68543 259 aa26.68■■□□□ 1.86
SMARCC2-210ENST00000550519 TEX11Q8IYF3 940 aa26.68■■□□□ 1.86
SMARCC2-210ENST00000550519 PROCA1Q8NCQ7 364 aaPredicted RBP26.68■■□□□ 1.86
SMARCC2-210ENST00000550519 RNF208Q9H0X6 261 aa26.68■■□□□ 1.86
SMARCC2-210ENST00000550519 BIN2Q9UBW5 565 aaPredicted RBP26.68■■□□□ 1.86
SMARCC2-210ENST00000550519 PTPRFP10586 1907 aa26.68■■□□□ 1.86
SMARCC2-210ENST00000550519 CEP290O15078 2479 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms