RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 FOCADQ5VW36 1801 aa16.83■□□□□ 0.28
CACNB3-216ENST00000550391 ECM29Q5VYK3 1845 aa16.83■□□□□ 0.28
CACNB3-216ENST00000550391 IFNL3Q8IZI9 196 aa16.83■□□□□ 0.28
CACNB3-216ENST00000550391 OGFOD1Q8N543 542 aa16.83■□□□□ 0.28
CACNB3-216ENST00000550391 DPF2Q92785 391 aa16.83■□□□□ 0.28
CACNB3-216ENST00000550391 KCNB2Q92953 911 aa16.83■□□□□ 0.28
CACNB3-216ENST00000550391 L3MBTL3Q96JM7 780 aaPredicted RBP16.83■□□□□ 0.28
CACNB3-216ENST00000550391 NACAP1Q9BZK3 213 aa16.83■□□□□ 0.28
CACNB3-216ENST00000550391 EPB41L4AQ9HCS5 686 aaPredicted RBP16.83■□□□□ 0.28
CACNB3-216ENST00000550391 GJA3Q9Y6H8 435 aa16.83■□□□□ 0.28
CACNB3-216ENST00000550391 FGAP02671 866 aa16.82■□□□□ 0.28
CACNB3-216ENST00000550391 GMPSP49915 693 aaPredicted RBP16.82■□□□□ 0.28
CACNB3-216ENST00000550391 ANAPC15P60006 121 aa16.82■□□□□ 0.28
CACNB3-216ENST00000550391 CFAP100Q494V2 611 aa16.82■□□□□ 0.28
CACNB3-216ENST00000550391 CREB3L3Q68CJ9 461 aa16.82■□□□□ 0.28
CACNB3-216ENST00000550391 GIMAP6Q6P9H5 292 aa16.82■□□□□ 0.28
CACNB3-216ENST00000550391 GPC2Q8N158 579 aa16.82■□□□□ 0.28
CACNB3-216ENST00000550391 SDR42E1Q8WUS8 393 aa16.82■□□□□ 0.28
CACNB3-216ENST00000550391 IL17RAQ96F46 866 aa16.82■□□□□ 0.28
CACNB3-216ENST00000550391 ATP8A2Q9NTI2 1148 aa16.82■□□□□ 0.28
CACNB3-216ENST00000550391 PALD1Q9ULE6 856 aa16.82■□□□□ 0.28
CACNB3-216ENST00000550391 RBM19Q9Y4C8 960 aaKnown RBP16.82■□□□□ 0.28
CACNB3-216ENST00000550391 PCDHAC2Q9Y5I4 1007 aa16.82■□□□□ 0.28
CACNB3-216ENST00000550391 SLC27A2O14975 620 aa16.81■□□□□ 0.28
CACNB3-216ENST00000550391 ZKSCAN1P17029 563 aaPredicted RBP16.81■□□□□ 0.28
CACNB3-216ENST00000550391 RBM5P52756 815 aaKnown RBP eCLIP16.81■□□□□ 0.28
CACNB3-216ENST00000550391 ZNF280AP59817 542 aaPredicted RBP16.81■□□□□ 0.28
CACNB3-216ENST00000550391 MTMR14Q8NCE2 650 aa16.81■□□□□ 0.28
CACNB3-216ENST00000550391 KIF2CQ99661 725 aa16.81■□□□□ 0.28
CACNB3-216ENST00000550391 CLEC11AQ9Y240 323 aa16.81■□□□□ 0.28
CACNB3-216ENST00000550391 LAMA4Q16363 1823 aa16.81■□□□□ 0.28
CACNB3-216ENST00000550391 CYP21A2P08686 494 aa16.8■□□□□ 0.28
CACNB3-216ENST00000550391 MAP2K2P36507 400 aa16.8■□□□□ 0.28
CACNB3-216ENST00000550391 DGKZQ13574 1117 aa16.8■□□□□ 0.28
CACNB3-216ENST00000550391 CDC42EP5Q6NZY7 148 aa16.8■□□□□ 0.28
CACNB3-216ENST00000550391 PNMA8AQ86V59 439 aaPredicted RBP16.8■□□□□ 0.28
CACNB3-216ENST00000550391 TEX11Q8IYF3 940 aa16.8■□□□□ 0.28
CACNB3-216ENST00000550391 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
CACNB3-216ENST00000550391 DDRGK1Q96HY6 314 aa16.8■□□□□ 0.28
CACNB3-216ENST00000550391 CAPNS2Q96L46 248 aa16.8■□□□□ 0.28
CACNB3-216ENST00000550391 PRMT6Q96LA8 375 aaPredicted RBP16.8■□□□□ 0.28
CACNB3-216ENST00000550391 NAPBQ9H115 298 aa16.8■□□□□ 0.28
CACNB3-216ENST00000550391 DCP1AQ9NPI6 582 aaPredicted RBP16.8■□□□□ 0.28
CACNB3-216ENST00000550391 USP40Q9NVE5 1235 aa16.8■□□□□ 0.28
CACNB3-216ENST00000550391 SNX14Q9Y5W7 946 aa16.8■□□□□ 0.28
CACNB3-216ENST00000550391 THSD7BQ9C0I4 1608 aa16.8■□□□□ 0.28
CACNB3-216ENST00000550391 NAV1Q8NEY1 1877 aa16.8■□□□□ 0.28
CACNB3-216ENST00000550391 DDX60LQ5H9U9 1706 aaKnown RBP16.79■□□□□ 0.28
CACNB3-216ENST00000550391 BAZ2AQ9UIF9 1905 aaKnown RBP16.79■□□□□ 0.28
CACNB3-216ENST00000550391 SHTN1A0MZ66 631 aa16.79■□□□□ 0.28
CACNB3-216ENST00000550391 SPDYE2BA6NHP3 402 aa16.79■□□□□ 0.28
CACNB3-216ENST00000550391 SPDYE6P0CI01 402 aa16.79■□□□□ 0.28
CACNB3-216ENST00000550391 USP5P45974 858 aa16.79■□□□□ 0.28
CACNB3-216ENST00000550391 TDO2P48775 406 aa16.79■□□□□ 0.28
CACNB3-216ENST00000550391 DLGAP5Q15398 846 aa16.79■□□□□ 0.28
CACNB3-216ENST00000550391 IMMTQ16891 758 aaKnown RBP16.79■□□□□ 0.28
CACNB3-216ENST00000550391 TSGA10IPQ3SY00 556 aa16.79■□□□□ 0.28
CACNB3-216ENST00000550391 EAPPQ56P03 285 aaPredicted RBP16.79■□□□□ 0.28
CACNB3-216ENST00000550391 MICALL2Q8IY33 904 aa16.79■□□□□ 0.28
CACNB3-216ENST00000550391 TGFBRAP1Q8WUH2 860 aa16.79■□□□□ 0.28
CACNB3-216ENST00000550391 ZBED3Q96IU2 234 aaPredicted RBP16.79■□□□□ 0.28
CACNB3-216ENST00000550391 MYOZ2Q9NPC6 264 aa16.79■□□□□ 0.28
CACNB3-216ENST00000550391 CNOT7Q9UIV1 285 aaKnown RBP16.79■□□□□ 0.28
CACNB3-216ENST00000550391 WDHD1O75717 1129 aaPredicted RBP16.78■□□□□ 0.28
CACNB3-216ENST00000550391 LAMB1P07942 1786 aa16.78■□□□□ 0.28
CACNB3-216ENST00000550391 FLT1P17948 1338 aa16.77■□□□□ 0.28
CACNB3-216ENST00000550391 ZNF213O14771 459 aa16.77■□□□□ 0.28
CACNB3-216ENST00000550391 KRT32Q14532 448 aa16.77■□□□□ 0.28
CACNB3-216ENST00000550391 CTR9Q6PD62 1173 aa16.77■□□□□ 0.28
CACNB3-216ENST00000550391 PAXIP1Q6ZW49 1069 aaPredicted RBP16.77■□□□□ 0.28
CACNB3-216ENST00000550391 MAPKAPK5Q8IW41 473 aa16.77■□□□□ 0.28
CACNB3-216ENST00000550391 IDI2Q9BXS1 227 aa16.77■□□□□ 0.28
CACNB3-216ENST00000550391 TDRD3Q9H7E2 651 aaKnown RBP16.77■□□□□ 0.28
CACNB3-216ENST00000550391 GPRC5DQ9NZD1 345 aa16.77■□□□□ 0.28
CACNB3-216ENST00000550391 TAF6LQ9Y6J9 622 aa16.77■□□□□ 0.28
CACNB3-216ENST00000550391 RABEP1Q15276 862 aa16.76■□□□□ 0.27
CACNB3-216ENST00000550391 SBK1Q52WX2 424 aa16.76■□□□□ 0.27
CACNB3-216ENST00000550391 DDX4Q9NQI0 724 aaKnown RBP16.76■□□□□ 0.27
CACNB3-216ENST00000550391 ARPP21Q9UBL0 812 aaPredicted RBP16.76■□□□□ 0.27
CACNB3-216ENST00000550391 HACL1Q9UJ83 578 aa16.76■□□□□ 0.27
CACNB3-216ENST00000550391 MYH1P12882 1939 aa16.75■□□□□ 0.27
CACNB3-216ENST00000550391 USP17L12C9JPN9 530 aa16.75■□□□□ 0.27
CACNB3-216ENST00000550391 USP17L21D6R901 530 aa16.75■□□□□ 0.27
CACNB3-216ENST00000550391 H7C1D1 291 aa16.75■□□□□ 0.27
CACNB3-216ENST00000550391 WNT10BO00744 389 aa16.75■□□□□ 0.27
CACNB3-216ENST00000550391 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
CACNB3-216ENST00000550391 HAND2P61296 217 aa16.75■□□□□ 0.27
CACNB3-216ENST00000550391 PPARAQ07869 468 aa16.75■□□□□ 0.27
CACNB3-216ENST00000550391 ADCK5Q3MIX3 580 aa16.75■□□□□ 0.27
CACNB3-216ENST00000550391 SPDYE2Q495Y8 402 aa16.75■□□□□ 0.27
CACNB3-216ENST00000550391 TM6SF1Q9BZW5 370 aa16.75■□□□□ 0.27
CACNB3-216ENST00000550391 NBPF3Q9H094 633 aa16.75■□□□□ 0.27
CACNB3-216ENST00000550391 MCM9Q9NXL9 1143 aa16.75■□□□□ 0.27
CACNB3-216ENST00000550391 ZNF70Q9UC06 446 aaPredicted RBP16.75■□□□□ 0.27
CACNB3-216ENST00000550391 TSKSQ9UJT2 592 aa16.75■□□□□ 0.27
CACNB3-216ENST00000550391 ANAPC4Q9UJX5 808 aa16.75■□□□□ 0.27
CACNB3-216ENST00000550391 CASP8AP2Q9UKL3 1982 aa16.75■□□□□ 0.27
CACNB3-216ENST00000550391 MINDY4BA8MYZ0 360 aa16.74■□□□□ 0.27
CACNB3-216ENST00000550391 EGFRP00533 1210 aa16.74■□□□□ 0.27
CACNB3-216ENST00000550391 PSMA5P28066 241 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms