RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 CASQ1P31415 396 aa12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 PLA2G4AP47712 749 aa12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 MCM6Q14566 821 aa12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 IMMTQ16891 758 aaKnown RBP12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 CNNM3Q8NE01 707 aa12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 PUS3Q9BZE2 481 aaKnown RBP12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 IRX2Q9BZI1 471 aaPredicted RBP12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 ALDH8A1Q9H2A2 487 aaPredicted RBP12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 COPRSQ9NQ92 184 aa12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 RTEL1Q9NZ71 1219 aa12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 PUF60Q9UHX1 559 aaKnown RBP12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 FOXN1O15353 648 aa12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 LMAN1P49257 510 aa12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 KRBA2Q6ZNG9 492 aa12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 SEPT12Q8IYM1 358 aa12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 OSBP2Q969R2 916 aa12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 QTRT2Q9H974 415 aaKnown RBP12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 ARAP2Q8WZ64 1704 aa12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 MROH7-TTC4A0A0A0MT08 1334 aa12.36□□□□□ -0.43
SMARCC2-208ENST00000550150 A0A1B0GUL7 405 aa12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 UBE2Q2LH0YL09 131 aa12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 TTC39AQ5SRH9 613 aa12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 LINC00116Q8NCU8 138 aa12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 CCDC12Q8WUD4 166 aaPredicted RBP12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 ALG1Q9BT22 464 aa12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 SPEF2Q9C093 1822 aa12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 ONECUT3O60422 494 aaPredicted RBP12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 H2AFXP16104 143 aaPredicted RBP12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 ATP6V1AP38606 617 aa12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 FBXO18Q8NFZ0 1043 aa12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 WDR24Q96S15 920 aa12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 RNF216Q9NWF9 866 aaPredicted RBP12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 TBC1D2BQ9UPU7 963 aa12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 LAMB2P55268 1798 aa12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 COL4A1P02462 1669 aa12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 DHX16O60231 1041 aaKnown RBP12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 CRKLP46109 303 aaKnown RBP12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 MYL5Q02045 173 aa12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 TRDNQ13061 729 aa12.35□□□□□ -0.43
SMARCC2-208ENST00000550150 TAF1LQ8IZX4 1826 aa12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 PSDA5PKW4 1024 aaPredicted RBP12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 RNF113AO15541 343 aaKnown RBP12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 PHACTR2O75167 634 aa12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 EXOSC10Q01780 885 aaKnown RBP12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 RRP12Q5JTH9 1297 aaKnown RBP12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 KLHL34Q8N239 644 aa12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 SMARCE1Q969G3 411 aa12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 LRP5O75197 1615 aa12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 LAMA4Q16363 1823 aa12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 ZNF213O14771 459 aa12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 FGAP02671 866 aa12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 NCAPHQ15003 741 aa12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 GRAMD1CQ8IYS0 662 aa12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 L2HGDHQ9H9P8 463 aa12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 LY75O60449 1722 aa12.34□□□□□ -0.43
SMARCC2-208ENST00000550150 COBLO75128 1261 aa12.33□□□□□ -0.43
SMARCC2-208ENST00000550150 PPP2R3AQ06190 1150 aa12.33□□□□□ -0.43
SMARCC2-208ENST00000550150 TRIM29Q14134 588 aa12.33□□□□□ -0.43
SMARCC2-208ENST00000550150 VPS37DQ86XT2 251 aa12.33□□□□□ -0.43
SMARCC2-208ENST00000550150 C10orf67Q8IYJ2 551 aa12.33□□□□□ -0.43
SMARCC2-208ENST00000550150 BAG1Q99933 345 aaPredicted RBP12.33□□□□□ -0.43
SMARCC2-208ENST00000550150 PPP2R2CQ9Y2T4 447 aa12.33□□□□□ -0.43
SMARCC2-208ENST00000550150 FANCGO15287 622 aa12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 ADORA1P30542 326 aa12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 RFX5P48382 616 aaPredicted RBP12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 STX17P56962 302 aa12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 SMC1AQ14683 1233 aaKnown RBP12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 TOGARAM2Q6ZUX3 1019 aa12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 CMTR1Q8N1G2 835 aaKnown RBP12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 ZNF274Q96GC6 653 aaPredicted RBP12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 INCENPQ9NQS7 918 aa12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 A0A1B0GUL6 1792 aa12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 UBN2Q6ZU65 1347 aa12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 ZSCAN12O43309 604 aa12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 IDH1O75874 414 aaKnown RBP12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 GPTP24298 496 aa12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 DSCC1Q9BVC3 393 aa12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 ARFGAP3Q9NP61 516 aa12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 HELLSQ9NRZ9 838 aa12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 PCDHA5Q9Y5H7 936 aa12.33□□□□□ -0.44
SMARCC2-208ENST00000550150 CBFA2T2O43439 604 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 CYP2C19P33261 490 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 METAP2P50579 478 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 MTF1Q14872 753 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 LONRF3Q496Y0 759 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 CCDC158Q5M9N0 1113 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 ZMYM1Q5SVZ6 1142 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 WWC2Q6AWC2 1192 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 CEP126Q9P2H0 1117 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 RGS17Q9UGC6 210 aaPredicted RBP12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 A0A1W2PQ27 194 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 A0A1W2PQ64 194 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 A0A1W2PQD8 194 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 CCP110O43303 1012 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 SASH3O75995 380 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 FOXO4P98177 505 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 KIF23Q02241 960 aaPredicted RBP12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 NCOA7Q8NI08 942 aa12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 PUS7LQ9H0K6 701 aaKnown RBP12.32□□□□□ -0.44
SMARCC2-208ENST00000550150 TRPC5Q9UL62 973 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms