RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 HSP90AB4PQ58FF6 505 aa11.97□□□□□ -0.49
HDAC7-229ENST00000549883 MS4A4AQ96JQ5 239 aa11.97□□□□□ -0.49
HDAC7-229ENST00000549883 PTPN18Q99952 460 aa11.97□□□□□ -0.49
HDAC7-229ENST00000549883 AATFQ9NY61 560 aaKnown RBP eCLIP11.97□□□□□ -0.49
HDAC7-229ENST00000549883 RAB11FIP3O75154 756 aa11.96□□□□□ -0.49
HDAC7-229ENST00000549883 ENTPD3O75355 529 aa11.96□□□□□ -0.49
HDAC7-229ENST00000549883 IDH1O75874 414 aaKnown RBP11.96□□□□□ -0.49
HDAC7-229ENST00000549883 SLFNL1Q499Z3 407 aa11.96□□□□□ -0.49
HDAC7-229ENST00000549883 NAA16Q6N069 864 aaPredicted RBP11.96□□□□□ -0.49
HDAC7-229ENST00000549883 SLF2Q8IX21 1173 aa11.96□□□□□ -0.49
HDAC7-229ENST00000549883 CLASRPQ8N2M8 674 aaKnown RBP11.96□□□□□ -0.49
HDAC7-229ENST00000549883 OTUD5Q96G74 571 aa11.96□□□□□ -0.49
HDAC7-229ENST00000549883 ZNF341Q9BYN7 854 aa11.96□□□□□ -0.49
HDAC7-229ENST00000549883 CHMP4BQ9H444 224 aaKnown RBP11.96□□□□□ -0.49
HDAC7-229ENST00000549883 SAGE1Q9NXZ1 904 aa11.96□□□□□ -0.49
HDAC7-229ENST00000549883 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.96□□□□□ -0.49
HDAC7-229ENST00000549883 PHIPQ8WWQ0 1821 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 PHF20L1A8MW92 1017 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 CHGBP05060 677 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 LDHCP07864 332 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 ZBTB48P10074 688 aaPredicted RBP11.95□□□□□ -0.5
HDAC7-229ENST00000549883 CYP7A1P22680 504 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 GSTO1P78417 241 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 IFNL1Q8IU54 200 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 ZSCAN29Q8IWY8 852 aaPredicted RBP11.95□□□□□ -0.5
HDAC7-229ENST00000549883 TEX11Q8IYF3 940 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 MAGEB6Q8N7X4 407 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 MIGA1Q8NAN2 632 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 BRI3BPQ8WY22 251 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 DCTPP1Q9H773 170 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 ZNF112Q9UJU3 913 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 CSADQ9Y600 493 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 MYH1P12882 1939 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 ATAD5Q96QE3 1844 aa11.95□□□□□ -0.5
HDAC7-229ENST00000549883 MYH7P12883 1935 aa11.94□□□□□ -0.5
HDAC7-229ENST00000549883 DOCK1Q14185 1865 aa11.94□□□□□ -0.5
HDAC7-229ENST00000549883 MANSC4A6NHS7 340 aaPredicted RBP11.94□□□□□ -0.5
HDAC7-229ENST00000549883 SPDYE5A6NIY4 337 aa11.94□□□□□ -0.5
HDAC7-229ENST00000549883 UNCXA6NJT0 531 aa11.94□□□□□ -0.5
HDAC7-229ENST00000549883 GOLIM4O00461 696 aa11.94□□□□□ -0.5
HDAC7-229ENST00000549883 IFIT2P09913 472 aaKnown RBP11.94□□□□□ -0.5
HDAC7-229ENST00000549883 SREBF2Q12772 1141 aa11.94□□□□□ -0.5
HDAC7-229ENST00000549883 RRP1BQ14684 758 aaKnown RBP11.94□□□□□ -0.5
HDAC7-229ENST00000549883 DCAF15Q66K64 600 aa11.94□□□□□ -0.5
HDAC7-229ENST00000549883 CCDC84Q86UT8 332 aaPredicted RBP11.94□□□□□ -0.5
HDAC7-229ENST00000549883 REM2Q8IYK8 340 aaPredicted RBP11.94□□□□□ -0.5
HDAC7-229ENST00000549883 DNAJC2Q99543 621 aaKnown RBP11.94□□□□□ -0.5
HDAC7-229ENST00000549883 LRRCC1Q9C099 1032 aa11.94□□□□□ -0.5
HDAC7-229ENST00000549883 PTPRFP10586 1907 aa11.94□□□□□ -0.5
HDAC7-229ENST00000549883 TESPA1A2RU30 521 aaPredicted RBP11.93□□□□□ -0.5
HDAC7-229ENST00000549883 IRF6O14896 467 aa11.93□□□□□ -0.5
HDAC7-229ENST00000549883 PPP4CP60510 307 aa11.93□□□□□ -0.5
HDAC7-229ENST00000549883 SLC4A8Q2Y0W8 1093 aa11.93□□□□□ -0.5
HDAC7-229ENST00000549883 TSHZ3Q63HK5 1081 aa11.93□□□□□ -0.5
HDAC7-229ENST00000549883 ERO1BQ86YB8 467 aa11.93□□□□□ -0.5
HDAC7-229ENST00000549883 MAPKAPK5Q8IW41 473 aa11.93□□□□□ -0.5
HDAC7-229ENST00000549883 TGFBRAP1Q8WUH2 860 aa11.93□□□□□ -0.5
HDAC7-229ENST00000549883 OSBPL5Q9H0X9 879 aaPredicted RBP11.93□□□□□ -0.5
HDAC7-229ENST00000549883 BOLA2Q9H3K6 86 aa11.93□□□□□ -0.5
HDAC7-229ENST00000549883 CCL15-CCL14A0A0B4J2E2 113 aa11.92□□□□□ -0.5
HDAC7-229ENST00000549883 CAP1Q01518 475 aa11.92□□□□□ -0.5
HDAC7-229ENST00000549883 MAP3K10Q02779 954 aa11.92□□□□□ -0.5
HDAC7-229ENST00000549883 CCL15Q16663 113 aa11.92□□□□□ -0.5
HDAC7-229ENST00000549883 SHROOM1Q2M3G4 852 aaPredicted RBP11.92□□□□□ -0.5
HDAC7-229ENST00000549883 FAM43AQ8N2R8 423 aa11.92□□□□□ -0.5
HDAC7-229ENST00000549883 OTUD7AQ8TE49 926 aaPredicted RBP11.92□□□□□ -0.5
HDAC7-229ENST00000549883 ZNF296Q8WUU4 475 aaPredicted RBP11.92□□□□□ -0.5
HDAC7-229ENST00000549883 HOOK2Q96ED9 719 aa11.92□□□□□ -0.5
HDAC7-229ENST00000549883 MCOLN1Q9GZU1 580 aa11.92□□□□□ -0.5
HDAC7-229ENST00000549883 SAP30BPQ9UHR5 308 aaKnown RBP11.92□□□□□ -0.5
HDAC7-229ENST00000549883 ZSWIM8A7E2V4 1837 aa11.92□□□□□ -0.5
HDAC7-229ENST00000549883 FLT1P17948 1338 aa11.91□□□□□ -0.5
HDAC7-229ENST00000549883 GPR25O00155 361 aa11.91□□□□□ -0.5
HDAC7-229ENST00000549883 NPM3O75607 178 aaKnown RBP11.91□□□□□ -0.5
HDAC7-229ENST00000549883 PDE6AP16499 860 aa11.91□□□□□ -0.5
HDAC7-229ENST00000549883 ATP5JP18859 108 aa11.91□□□□□ -0.5
HDAC7-229ENST00000549883 JAG1P78504 1218 aa11.91□□□□□ -0.5
HDAC7-229ENST00000549883 EVX2Q03828 476 aa11.91□□□□□ -0.5
HDAC7-229ENST00000549883 CRHR2Q13324 411 aa11.91□□□□□ -0.5
HDAC7-229ENST00000549883 DGKZQ13574 1117 aa11.91□□□□□ -0.5
HDAC7-229ENST00000549883 MOGSQ13724 837 aa11.91□□□□□ -0.5
HDAC7-229ENST00000549883 NOL9Q5SY16 702 aaKnown RBP11.91□□□□□ -0.5
HDAC7-229ENST00000549883 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.91□□□□□ -0.5
HDAC7-229ENST00000549883 ABHD8Q96I13 439 aa11.91□□□□□ -0.5
HDAC7-229ENST00000549883 PALD1Q9ULE6 856 aa11.91□□□□□ -0.5
HDAC7-229ENST00000549883 DDX60LQ5H9U9 1706 aaKnown RBP11.91□□□□□ -0.5
HDAC7-229ENST00000549883 ZNF532Q9HCE3 1301 aa11.9□□□□□ -0.5
HDAC7-229ENST00000549883 COL2A1P02458 1487 aaPredicted RBP11.9□□□□□ -0.5
HDAC7-229ENST00000549883 BAZ2AQ9UIF9 1905 aaKnown RBP11.9□□□□□ -0.5
HDAC7-229ENST00000549883 TCRBV5S4A2TA0A5A2 114 aa11.9□□□□□ -0.5
HDAC7-229ENST00000549883 BTBD19C9JJ37 291 aa11.9□□□□□ -0.5
HDAC7-229ENST00000549883 BAG3O95817 575 aa11.9□□□□□ -0.5
HDAC7-229ENST00000549883 GTF2A2P52657 109 aa11.9□□□□□ -0.5
HDAC7-229ENST00000549883 INHBEP58166 350 aa11.9□□□□□ -0.5
HDAC7-229ENST00000549883 MAP3K12Q12852 859 aa11.9□□□□□ -0.5
HDAC7-229ENST00000549883 PPIL2Q13356 520 aa11.9□□□□□ -0.5
HDAC7-229ENST00000549883 SLC9C2Q5TAH2 1124 aa11.9□□□□□ -0.5
HDAC7-229ENST00000549883 NAV1Q8NEY1 1877 aa11.9□□□□□ -0.5
HDAC7-229ENST00000549883 HAUS7Q99871 368 aa11.9□□□□□ -0.5
HDAC7-229ENST00000549883 RIOK1Q9BRS2 568 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 2669 ms