RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 ZCCHC17Q9NP64 241 aaKnown RBP16.57■□□□□ 0.24
GCN1-206ENST00000549815 KCNH4Q9UQ05 1017 aa16.57■□□□□ 0.24
GCN1-206ENST00000549815 NOP58Q9Y2X3 529 aaKnown RBP16.57■□□□□ 0.24
GCN1-206ENST00000549815 DDTLA6NHG4 134 aaPredicted RBP16.56■□□□□ 0.24
GCN1-206ENST00000549815 TNNI3KQ59H18 835 aa16.56■□□□□ 0.24
GCN1-206ENST00000549815 TBC1D9Q6ZT07 1266 aa16.56■□□□□ 0.24
GCN1-206ENST00000549815 FTSJ3Q8IY81 847 aaKnown RBP16.56■□□□□ 0.24
GCN1-206ENST00000549815 PTPN22Q9Y2R2 807 aa16.56■□□□□ 0.24
GCN1-206ENST00000549815 FPGT-TNNI3KV9GXZ4 949 aa16.56■□□□□ 0.24
GCN1-206ENST00000549815 BRCA2P51587 3418 aa16.56■□□□□ 0.24
GCN1-206ENST00000549815 NPM3O75607 178 aaKnown RBP16.55■□□□□ 0.24
GCN1-206ENST00000549815 UQCRFS1P1P0C7P4 283 aa16.55■□□□□ 0.24
GCN1-206ENST00000549815 SLURP2P0DP57 97 aa16.55■□□□□ 0.24
GCN1-206ENST00000549815 MOGSQ13724 837 aa16.55■□□□□ 0.24
GCN1-206ENST00000549815 GORABQ5T7V8 394 aa16.55■□□□□ 0.24
GCN1-206ENST00000549815 ITPRIPQ8IWB1 547 aa16.55■□□□□ 0.24
GCN1-206ENST00000549815 DBNDD2Q9BQY9 259 aa16.55■□□□□ 0.24
GCN1-206ENST00000549815 TLR2O60603 784 aa16.54■□□□□ 0.24
GCN1-206ENST00000549815 SURF6O75683 361 aaKnown RBP16.54■□□□□ 0.24
GCN1-206ENST00000549815 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.54■□□□□ 0.24
GCN1-206ENST00000549815 EFCC1Q9HA90 598 aa16.54■□□□□ 0.24
GCN1-206ENST00000549815 ZSWIM8A7E2V4 1837 aa16.54■□□□□ 0.24
GCN1-206ENST00000549815 PHIPQ8WWQ0 1821 aa16.54■□□□□ 0.24
GCN1-206ENST00000549815 MAST2Q6P0Q8 1798 aa16.54■□□□□ 0.24
GCN1-206ENST00000549815 MYO5AQ9Y4I1 1855 aaKnown RBP16.53■□□□□ 0.24
GCN1-206ENST00000549815 PICALMQ13492 652 aa16.53■□□□□ 0.24
GCN1-206ENST00000549815 CEP85Q6P2H3 762 aa16.53■□□□□ 0.24
GCN1-206ENST00000549815 ANKRD23Q86SG2 305 aa16.53■□□□□ 0.24
GCN1-206ENST00000549815 ZNF512BQ96KM6 892 aaPredicted RBP16.53■□□□□ 0.24
GCN1-206ENST00000549815 COL2A1P02458 1487 aaPredicted RBP16.53■□□□□ 0.24
GCN1-206ENST00000549815 DOCK1Q14185 1865 aa16.52■□□□□ 0.24
GCN1-206ENST00000549815 ADGRA2Q96PE1 1338 aa16.52■□□□□ 0.24
GCN1-206ENST00000549815 MAP4K4O95819 1239 aaPredicted RBP16.52■□□□□ 0.24
GCN1-206ENST00000549815 LDHCP07864 332 aa16.52■□□□□ 0.24
GCN1-206ENST00000549815 GSTO1P78417 241 aa16.52■□□□□ 0.24
GCN1-206ENST00000549815 SCYL3Q8IZE3 742 aa16.52■□□□□ 0.24
GCN1-206ENST00000549815 PANK1Q8TE04 598 aa16.52■□□□□ 0.24
GCN1-206ENST00000549815 RBBP6Q7Z6E9 1792 aaKnown RBP16.51■□□□□ 0.23
GCN1-206ENST00000549815 PTPRFP10586 1907 aa16.51■□□□□ 0.23
GCN1-206ENST00000549815 PDE4DIPQ5VU43 2346 aa16.51■□□□□ 0.23
GCN1-206ENST00000549815 CXCL11O14625 94 aa16.51■□□□□ 0.23
GCN1-206ENST00000549815 TBC1D12O60347 775 aa16.51■□□□□ 0.23
GCN1-206ENST00000549815 OS9Q13438 667 aaPredicted RBP16.51■□□□□ 0.23
GCN1-206ENST00000549815 TTC39AQ5SRH9 613 aa16.51■□□□□ 0.23
GCN1-206ENST00000549815 GPAT2Q6NUI2 795 aa16.51■□□□□ 0.23
GCN1-206ENST00000549815 C17orf99Q6UX52 265 aa16.51■□□□□ 0.23
GCN1-206ENST00000549815 ZSCAN29Q8IWY8 852 aaPredicted RBP16.51■□□□□ 0.23
GCN1-206ENST00000549815 ARMC5Q96C12 935 aa16.51■□□□□ 0.23
GCN1-206ENST00000549815 SNRKQ9NRH2 765 aa16.51■□□□□ 0.23
GCN1-206ENST00000549815 TLR7Q9NYK1 1049 aaKnown RBP16.51■□□□□ 0.23
GCN1-206ENST00000549815 RAI14Q9P0K7 980 aa16.51■□□□□ 0.23
GCN1-206ENST00000549815 DBNLQ9UJU6 430 aaKnown RBP16.51■□□□□ 0.23
GCN1-206ENST00000549815 MKI67P46013 3256 aaKnown RBP16.5■□□□□ 0.23
GCN1-206ENST00000549815 CYP2E1P05181 493 aaPredicted RBP16.5■□□□□ 0.23
GCN1-206ENST00000549815 PTPRAP18433 802 aa16.5■□□□□ 0.23
GCN1-206ENST00000549815 CCDC158Q5M9N0 1113 aa16.5■□□□□ 0.23
GCN1-206ENST00000549815 EAF2Q96CJ1 260 aaPredicted RBP16.5■□□□□ 0.23
GCN1-206ENST00000549815 ARHGAP39Q9C0H5 1083 aa16.5■□□□□ 0.23
GCN1-206ENST00000549815 OSBPL5Q9H0X9 879 aaPredicted RBP16.5■□□□□ 0.23
GCN1-206ENST00000549815 LRP2BPQ9P2M1 347 aa16.5■□□□□ 0.23
GCN1-206ENST00000549815 AFG3L2Q9Y4W6 797 aa16.5■□□□□ 0.23
GCN1-206ENST00000549815 CDK5RAP2Q96SN8 1893 aa16.5■□□□□ 0.23
GCN1-206ENST00000549815 SIPA1L1O43166 1804 aa16.49■□□□□ 0.23
GCN1-206ENST00000549815 A0A0G2JLL6 359 aaPredicted RBP16.49■□□□□ 0.23
GCN1-206ENST00000549815 PDHXO00330 501 aa16.49■□□□□ 0.23
GCN1-206ENST00000549815 CTGFP29279 349 aa16.49■□□□□ 0.23
GCN1-206ENST00000549815 LACTBP83111 547 aaPredicted RBP16.49■□□□□ 0.23
GCN1-206ENST00000549815 PRRT2Q7Z6L0 340 aaPredicted RBP16.49■□□□□ 0.23
GCN1-206ENST00000549815 ADGRA1Q86SQ6 560 aa16.49■□□□□ 0.23
GCN1-206ENST00000549815 CCDC8Q9H0W5 538 aaPredicted RBP16.49■□□□□ 0.23
GCN1-206ENST00000549815 ZHX2Q9Y6X8 837 aa16.49■□□□□ 0.23
GCN1-206ENST00000549815 FOCADQ5VW36 1801 aa16.49■□□□□ 0.23
GCN1-206ENST00000549815 CTNND1O60716 968 aaKnown RBP16.48■□□□□ 0.23
GCN1-206ENST00000549815 IGSF3O75054 1194 aa16.48■□□□□ 0.23
GCN1-206ENST00000549815 ZAP70P43403 619 aa16.48■□□□□ 0.23
GCN1-206ENST00000549815 PPP4CP60510 307 aa16.48■□□□□ 0.23
GCN1-206ENST00000549815 SH3RF3Q8TEJ3 882 aaPredicted RBP16.48■□□□□ 0.23
GCN1-206ENST00000549815 PIH1D3Q9NQM4 214 aaKnown RBP16.48■□□□□ 0.23
GCN1-206ENST00000549815 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.48■□□□□ 0.23
GCN1-206ENST00000549815 CPA4Q9UI42 421 aa16.48■□□□□ 0.23
GCN1-206ENST00000549815 PTCH2Q9Y6C5 1203 aa16.48■□□□□ 0.23
GCN1-206ENST00000549815 POTEFA5A3E0 1075 aa16.47■□□□□ 0.23
GCN1-206ENST00000549815 FAM196BA6NMK8 535 aa16.47■□□□□ 0.23
GCN1-206ENST00000549815 RRP1BQ14684 758 aaKnown RBP16.47■□□□□ 0.23
GCN1-206ENST00000549815 ARHGEF6Q15052 776 aa16.47■□□□□ 0.23
GCN1-206ENST00000549815 NAA16Q6N069 864 aaPredicted RBP16.47■□□□□ 0.23
GCN1-206ENST00000549815 TEX11Q8IYF3 940 aa16.47■□□□□ 0.23
GCN1-206ENST00000549815 PICK1Q9NRD5 415 aa16.47■□□□□ 0.23
GCN1-206ENST00000549815 AATFQ9NY61 560 aaKnown RBP eCLIP16.47■□□□□ 0.23
GCN1-206ENST00000549815 EXOC6BQ9Y2D4 811 aa16.47■□□□□ 0.23
GCN1-206ENST00000549815 ATAD5Q96QE3 1844 aa16.47■□□□□ 0.23
GCN1-206ENST00000549815 KIAA0100Q14667 2235 aaKnown RBP16.46■□□□□ 0.23
GCN1-206ENST00000549815 BCRP11274 1271 aa16.46■□□□□ 0.23
GCN1-206ENST00000549815 CCDC84Q86UT8 332 aaPredicted RBP16.46■□□□□ 0.23
GCN1-206ENST00000549815 ZNF333Q96JL9 665 aa16.46■□□□□ 0.23
GCN1-206ENST00000549815 BAG3O95817 575 aa16.45■□□□□ 0.22
GCN1-206ENST00000549815 GNRH1P01148 92 aa16.45■□□□□ 0.22
GCN1-206ENST00000549815 CYP2C8P10632 490 aa16.45■□□□□ 0.22
GCN1-206ENST00000549815 FASTKD5Q7L8L6 764 aaKnown RBP16.45■□□□□ 0.22
GCN1-206ENST00000549815 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms