RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ENGASEQ8NFI3 743 aa11.67□□□□□ -0.54
RAB5B-206ENST00000549505 FOXD4L4Q8WXT5 416 aaPredicted RBP11.67□□□□□ -0.54
RAB5B-206ENST00000549505 RBM17Q96I25 401 aaKnown RBP11.67□□□□□ -0.54
RAB5B-206ENST00000549505 CLSTN2Q9H4D0 955 aa11.67□□□□□ -0.54
RAB5B-206ENST00000549505 SUGT1Q9Y2Z0 365 aa11.67□□□□□ -0.54
RAB5B-206ENST00000549505 FGD1P98174 961 aa11.66□□□□□ -0.54
RAB5B-206ENST00000549505 MECOMQ03112 1051 aa11.66□□□□□ -0.54
RAB5B-206ENST00000549505 SPATA32Q96LK8 384 aa11.66□□□□□ -0.54
RAB5B-206ENST00000549505 GDPD2Q9HCC8 539 aa11.66□□□□□ -0.54
RAB5B-206ENST00000549505 NCOA5Q9HCD5 579 aaKnown RBP11.66□□□□□ -0.54
RAB5B-206ENST00000549505 TCP11L1Q9NUJ3 509 aa11.66□□□□□ -0.54
RAB5B-206ENST00000549505 PRKAB2O43741 272 aa11.66□□□□□ -0.54
RAB5B-206ENST00000549505 NOVP48745 357 aa11.66□□□□□ -0.54
RAB5B-206ENST00000549505 ST5P78524 1137 aa11.66□□□□□ -0.54
RAB5B-206ENST00000549505 ARPP21Q9UBL0 812 aaPredicted RBP11.66□□□□□ -0.54
RAB5B-206ENST00000549505 B4E1Z4 1266 aa11.66□□□□□ -0.54
RAB5B-206ENST00000549505 H3BQV1 296 aa11.66□□□□□ -0.54
RAB5B-206ENST00000549505 KLRK1P26718 216 aa11.66□□□□□ -0.54
RAB5B-206ENST00000549505 GSTO1P78417 241 aa11.66□□□□□ -0.54
RAB5B-206ENST00000549505 KIF23Q02241 960 aaPredicted RBP11.66□□□□□ -0.54
RAB5B-206ENST00000549505 IFFO2Q5TF58 517 aa11.66□□□□□ -0.54
RAB5B-206ENST00000549505 CTR9Q6PD62 1173 aa11.66□□□□□ -0.54
RAB5B-206ENST00000549505 WASF1Q92558 559 aa11.66□□□□□ -0.54
RAB5B-206ENST00000549505 CTAGE5O15320 804 aa11.65□□□□□ -0.54
RAB5B-206ENST00000549505 ZBTB43O43298 467 aa11.65□□□□□ -0.54
RAB5B-206ENST00000549505 FIBPO43427 364 aa11.65□□□□□ -0.54
RAB5B-206ENST00000549505 SERPINB2P05120 415 aa11.65□□□□□ -0.54
RAB5B-206ENST00000549505 GTF2E1P29083 439 aaPredicted RBP11.65□□□□□ -0.54
RAB5B-206ENST00000549505 METAP2P50579 478 aaKnown RBP eCLIP11.65□□□□□ -0.54
RAB5B-206ENST00000549505 DDR1Q08345 913 aa11.65□□□□□ -0.54
RAB5B-206ENST00000549505 FUT2Q10981 343 aa11.65□□□□□ -0.54
RAB5B-206ENST00000549505 GLIPR1L2Q4G1C9 344 aa11.65□□□□□ -0.54
RAB5B-206ENST00000549505 SP8Q8IXZ3 490 aa11.65□□□□□ -0.54
RAB5B-206ENST00000549505 SNED1Q8TER0 1413 aa11.65□□□□□ -0.54
RAB5B-206ENST00000549505 GAKO14976 1311 aa11.65□□□□□ -0.54
RAB5B-206ENST00000549505 WTIPA6NIX2 430 aaPredicted RBP11.65□□□□□ -0.54
RAB5B-206ENST00000549505 CDC27P30260 824 aa11.65□□□□□ -0.54
RAB5B-206ENST00000549505 ESR2Q92731 530 aa11.65□□□□□ -0.54
RAB5B-206ENST00000549505 ORC3Q9UBD5 711 aaPredicted RBP11.65□□□□□ -0.54
RAB5B-206ENST00000549505 CCDC196A0A1B0GTZ2 297 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 DDAH1O94760 285 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 CCT2P78371 535 aaKnown RBP11.64□□□□□ -0.55
RAB5B-206ENST00000549505 SART3Q15020 963 aaKnown RBP11.64□□□□□ -0.55
RAB5B-206ENST00000549505 TXNRD1Q16881 649 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 TMEM67Q5HYA8 995 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 CPLX2Q6PUV4 134 aaKnown RBP11.64□□□□□ -0.55
RAB5B-206ENST00000549505 CHST3Q7LGC8 479 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 ZNF804AQ7Z570 1209 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.64□□□□□ -0.55
RAB5B-206ENST00000549505 RANBP6O60518 1105 aaKnown RBP11.64□□□□□ -0.55
RAB5B-206ENST00000549505 CALM1P0DP23 149 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 CALM2P0DP24 149 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 CALM3P0DP25 149 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 ADALQ6DHV7 355 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 BICDL1Q6ZP65 573 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 LINC00301Q8NCQ3 95 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 C8orf76Q96K31 380 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 DCP1AQ9NPI6 582 aaPredicted RBP11.64□□□□□ -0.55
RAB5B-206ENST00000549505 PPP6R2O75170 966 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 CTDSPL2Q05D32 466 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 SNW1Q13573 536 aaKnown RBP11.64□□□□□ -0.55
RAB5B-206ENST00000549505 KCNG4Q8TDN1 519 aa11.64□□□□□ -0.55
RAB5B-206ENST00000549505 CRNKL1Q9BZJ0 848 aaKnown RBP11.64□□□□□ -0.55
RAB5B-206ENST00000549505 KDM4AO75164 1064 aa11.63□□□□□ -0.55
RAB5B-206ENST00000549505 TDO2P48775 406 aa11.63□□□□□ -0.55
RAB5B-206ENST00000549505 CCDC178Q5BJE1 867 aa11.63□□□□□ -0.55
RAB5B-206ENST00000549505 SMIM5Q71RC9 77 aa11.63□□□□□ -0.55
RAB5B-206ENST00000549505 TXNRD3Q86VQ6 643 aa11.63□□□□□ -0.55
RAB5B-206ENST00000549505 DDX11Q96FC9 970 aa11.63□□□□□ -0.55
RAB5B-206ENST00000549505 RNF26Q9BY78 433 aaPredicted RBP11.63□□□□□ -0.55
RAB5B-206ENST00000549505 RBM28Q9NW13 759 aaKnown RBP11.63□□□□□ -0.55
RAB5B-206ENST00000549505 RAI14Q9P0K7 980 aa11.63□□□□□ -0.55
RAB5B-206ENST00000549505 GREB1LQ9C091 1923 aaPredicted RBP11.63□□□□□ -0.55
RAB5B-206ENST00000549505 APPP05067 770 aa11.63□□□□□ -0.55
RAB5B-206ENST00000549505 LIG1P18858 919 aa11.63□□□□□ -0.55
RAB5B-206ENST00000549505 FKBP1AP62942 108 aaKnown RBP11.63□□□□□ -0.55
RAB5B-206ENST00000549505 GPSM2P81274 684 aa11.63□□□□□ -0.55
RAB5B-206ENST00000549505 MYSM1Q5VVJ2 828 aa11.63□□□□□ -0.55
RAB5B-206ENST00000549505 NLGN1Q8N2Q7 840 aa11.63□□□□□ -0.55
RAB5B-206ENST00000549505 USP28Q96RU2 1077 aa11.63□□□□□ -0.55
RAB5B-206ENST00000549505 SENP2Q9HC62 589 aa11.63□□□□□ -0.55
RAB5B-206ENST00000549505 GPR75-ASB3A0A0A6YYF3 556 aa11.62□□□□□ -0.55
RAB5B-206ENST00000549505 A0A0G2JS52 829 aa11.62□□□□□ -0.55
RAB5B-206ENST00000549505 WTAPQ15007 396 aa11.62□□□□□ -0.55
RAB5B-206ENST00000549505 CRACR2BQ8N4Y2 399 aaPredicted RBP11.62□□□□□ -0.55
RAB5B-206ENST00000549505 ZSCAN10Q96SZ4 725 aaPredicted RBP11.62□□□□□ -0.55
RAB5B-206ENST00000549505 FOXP1Q9H334 677 aaPredicted RBP11.62□□□□□ -0.55
RAB5B-206ENST00000549505 SLC12A7Q9Y666 1083 aa11.62□□□□□ -0.55
RAB5B-206ENST00000549505 BAZ2AQ9UIF9 1905 aaKnown RBP11.62□□□□□ -0.55
RAB5B-206ENST00000549505 PLIN4Q96Q06 1357 aa11.62□□□□□ -0.55
RAB5B-206ENST00000549505 IFIT3O14879 490 aaKnown RBP11.62□□□□□ -0.55
RAB5B-206ENST00000549505 FAM182BQ5T319 152 aa11.62□□□□□ -0.55
RAB5B-206ENST00000549505 FERMT3Q86UX7 667 aa11.62□□□□□ -0.55
RAB5B-206ENST00000549505 VPS37DQ86XT2 251 aa11.62□□□□□ -0.55
RAB5B-206ENST00000549505 TIGD1Q96MW7 591 aa11.62□□□□□ -0.55
RAB5B-206ENST00000549505 MRIQ9BWK5 157 aa11.62□□□□□ -0.55
RAB5B-206ENST00000549505 MROH7-TTC4A0A0A0MT08 1334 aa11.62□□□□□ -0.55
RAB5B-206ENST00000549505 LDHCP07864 332 aa11.62□□□□□ -0.55
RAB5B-206ENST00000549505 PTPAQ15257 358 aa11.62□□□□□ -0.55
RAB5B-206ENST00000549505 TBC1D22AQ8WUA7 517 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms