RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 SMCR8Q8TEV9 937 aaPredicted RBP11.28□□□□□ -0.6
UBE2N-203ENST00000549490 FAM161BQ96MY7 647 aa11.28□□□□□ -0.6
UBE2N-203ENST00000549490 HMX1Q9NP08 348 aaPredicted RBP11.28□□□□□ -0.6
UBE2N-203ENST00000549490 PICK1Q9NRD5 415 aa11.28□□□□□ -0.6
UBE2N-203ENST00000549490 FAM198AQ9UFP1 575 aa11.28□□□□□ -0.6
UBE2N-203ENST00000549490 OGDHLQ9ULD0 1010 aa11.28□□□□□ -0.6
UBE2N-203ENST00000549490 MROH5Q6ZUA9 1318 aa11.28□□□□□ -0.6
UBE2N-203ENST00000549490 ALPK3Q96L96 1907 aa11.27□□□□□ -0.6
UBE2N-203ENST00000549490 SCYL3Q8IZE3 742 aa11.27□□□□□ -0.61
UBE2N-203ENST00000549490 GJD2Q9UKL4 321 aa11.27□□□□□ -0.61
UBE2N-203ENST00000549490 DAGLAQ9Y4D2 1042 aa11.27□□□□□ -0.61
UBE2N-203ENST00000549490 LAMA2P24043 3122 aaKnown RBP11.27□□□□□ -0.61
UBE2N-203ENST00000549490 PFASO15067 1338 aa11.27□□□□□ -0.61
UBE2N-203ENST00000549490 MDM2Q00987 491 aaPredicted RBP11.26□□□□□ -0.61
UBE2N-203ENST00000549490 FAM110CQ1W6H9 321 aa11.26□□□□□ -0.61
UBE2N-203ENST00000549490 LRRC24Q50LG9 513 aa11.26□□□□□ -0.61
UBE2N-203ENST00000549490 METTL24Q5JXM2 366 aa11.26□□□□□ -0.61
UBE2N-203ENST00000549490 ATRNL1Q5VV63 1379 aa11.26□□□□□ -0.61
UBE2N-203ENST00000549490 PDE8BO95263 885 aa11.25□□□□□ -0.61
UBE2N-203ENST00000549490 COL6A1P12109 1028 aa11.25□□□□□ -0.61
UBE2N-203ENST00000549490 DIXDC1Q155Q3 683 aa11.25□□□□□ -0.61
UBE2N-203ENST00000549490 VGLL2Q8N8G2 317 aa11.25□□□□□ -0.61
UBE2N-203ENST00000549490 KAZALD1Q96I82 304 aa11.25□□□□□ -0.61
UBE2N-203ENST00000549490 SUCLG2Q96I99 432 aa11.25□□□□□ -0.61
UBE2N-203ENST00000549490 USP40Q9NVE5 1235 aa11.25□□□□□ -0.61
UBE2N-203ENST00000549490 C9orf78Q9NZ63 289 aaPredicted RBP11.25□□□□□ -0.61
UBE2N-203ENST00000549490 AGTPBP1Q9UPW5 1226 aa11.25□□□□□ -0.61
UBE2N-203ENST00000549490 TRIM75PA6NK02 468 aa11.24□□□□□ -0.61
UBE2N-203ENST00000549490 VAMP4O75379 141 aa11.24□□□□□ -0.61
UBE2N-203ENST00000549490 SLURP2P0DP57 97 aa11.24□□□□□ -0.61
UBE2N-203ENST00000549490 MAP3K10Q02779 954 aa11.24□□□□□ -0.61
UBE2N-203ENST00000549490 LRRC26Q2I0M4 334 aa11.24□□□□□ -0.61
UBE2N-203ENST00000549490 TREML2Q5T2D2 321 aa11.24□□□□□ -0.61
UBE2N-203ENST00000549490 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
UBE2N-203ENST00000549490 CCDC84Q86UT8 332 aaPredicted RBP11.24□□□□□ -0.61
UBE2N-203ENST00000549490 WDR66Q8TBY9 1149 aa11.24□□□□□ -0.61
UBE2N-203ENST00000549490 CDX2Q99626 313 aaPredicted RBP11.24□□□□□ -0.61
UBE2N-203ENST00000549490 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.24□□□□□ -0.61
UBE2N-203ENST00000549490 EYSQ5T1H1 3165 aa11.24□□□□□ -0.61
UBE2N-203ENST00000549490 MGAMO43451 1857 aa11.23□□□□□ -0.61
UBE2N-203ENST00000549490 CTNND1O60716 968 aaKnown RBP11.23□□□□□ -0.61
UBE2N-203ENST00000549490 MAP3K21Q5TCX8 1036 aa11.23□□□□□ -0.61
UBE2N-203ENST00000549490 TRIB2Q92519 343 aa11.23□□□□□ -0.61
UBE2N-203ENST00000549490 PNMA3Q9UL41 463 aa11.23□□□□□ -0.61
UBE2N-203ENST00000549490 LRRFIP2Q9Y608 721 aaKnown RBP11.23□□□□□ -0.61
UBE2N-203ENST00000549490 PRUNE2Q8WUY3 3088 aa11.23□□□□□ -0.61
UBE2N-203ENST00000549490 COL2A1P02458 1487 aaPredicted RBP11.22□□□□□ -0.61
UBE2N-203ENST00000549490 IFIT1P09914 478 aaKnown RBP11.22□□□□□ -0.61
UBE2N-203ENST00000549490 PRKAR2AP13861 404 aaKnown RBP11.22□□□□□ -0.61
UBE2N-203ENST00000549490 FGFR2P21802 821 aa11.22□□□□□ -0.61
UBE2N-203ENST00000549490 PRDX5P30044 214 aa11.22□□□□□ -0.61
UBE2N-203ENST00000549490 GCLCP48506 637 aaPredicted RBP11.22□□□□□ -0.61
UBE2N-203ENST00000549490 RGS3P49796 1198 aa11.22□□□□□ -0.61
UBE2N-203ENST00000549490 DDX10Q13206 875 aaKnown RBP11.22□□□□□ -0.61
UBE2N-203ENST00000549490 ZNF697Q5TEC3 545 aa11.22□□□□□ -0.61
UBE2N-203ENST00000549490 WWC1Q8IX03 1113 aa11.22□□□□□ -0.61
UBE2N-203ENST00000549490 MAFAQ8NHW3 353 aaPredicted RBP11.22□□□□□ -0.61
UBE2N-203ENST00000549490 KIF16BQ96L93 1317 aa11.22□□□□□ -0.61
UBE2N-203ENST00000549490 IL16Q14005 1332 aa11.21□□□□□ -0.61
UBE2N-203ENST00000549490 ENTPD3O75355 529 aa11.21□□□□□ -0.61
UBE2N-203ENST00000549490 ALDH1L1O75891 902 aa11.21□□□□□ -0.61
UBE2N-203ENST00000549490 NBPF7P0C2Y1 421 aaPredicted RBP11.21□□□□□ -0.61
UBE2N-203ENST00000549490 CYP2B6P20813 491 aa11.21□□□□□ -0.61
UBE2N-203ENST00000549490 COL9A1P20849 921 aa11.21□□□□□ -0.61
UBE2N-203ENST00000549490 ZEB1P37275 1124 aaPredicted RBP11.21□□□□□ -0.61
UBE2N-203ENST00000549490 PUM3Q15397 648 aaKnown RBP11.21□□□□□ -0.61
UBE2N-203ENST00000549490 CCDC27Q2M243 656 aa11.21□□□□□ -0.61
UBE2N-203ENST00000549490 RABL6Q3YEC7 729 aaPredicted RBP11.21□□□□□ -0.61
UBE2N-203ENST00000549490 LHX8Q68G74 356 aa11.21□□□□□ -0.61
UBE2N-203ENST00000549490 LBHD1Q9BQE6 289 aaPredicted RBP11.21□□□□□ -0.61
UBE2N-203ENST00000549490 IDI2Q9BXS1 227 aa11.21□□□□□ -0.61
UBE2N-203ENST00000549490 SEMA6BQ9H3T3 888 aa11.21□□□□□ -0.61
UBE2N-203ENST00000549490 BICC1Q9H694 974 aaKnown RBP11.21□□□□□ -0.61
UBE2N-203ENST00000549490 SPINK5Q9NQ38 1064 aaPredicted RBP11.21□□□□□ -0.61
UBE2N-203ENST00000549490 FANCIQ9NVI1 1328 aa11.2□□□□□ -0.62
UBE2N-203ENST00000549490 DDTLA6NHG4 134 aaPredicted RBP11.2□□□□□ -0.62
UBE2N-203ENST00000549490 LDHBP07195 334 aaKnown RBP11.2□□□□□ -0.62
UBE2N-203ENST00000549490 CACNB2Q08289 660 aaPredicted RBP11.2□□□□□ -0.62
UBE2N-203ENST00000549490 SPP2Q13103 211 aa11.2□□□□□ -0.62
UBE2N-203ENST00000549490 SLC4A10Q6U841 1118 aa11.2□□□□□ -0.62
UBE2N-203ENST00000549490 ZSCAN29Q8IWY8 852 aaPredicted RBP11.2□□□□□ -0.62
UBE2N-203ENST00000549490 ANKRD44Q8N8A2 993 aa11.2□□□□□ -0.62
UBE2N-203ENST00000549490 PROCA1Q8NCQ7 364 aaPredicted RBP11.2□□□□□ -0.62
UBE2N-203ENST00000549490 KLHDC4Q8TBB5 520 aa11.2□□□□□ -0.62
UBE2N-203ENST00000549490 SRCIN1Q9C0H9 1055 aa11.2□□□□□ -0.62
UBE2N-203ENST00000549490 ASCC2Q9H1I8 757 aaPredicted RBP11.2□□□□□ -0.62
UBE2N-203ENST00000549490 DDX60LQ5H9U9 1706 aaKnown RBP11.2□□□□□ -0.62
UBE2N-203ENST00000549490 XRCC5P13010 732 aaKnown RBP11.19□□□□□ -0.62
UBE2N-203ENST00000549490 CCND3P30281 292 aaPredicted RBP11.19□□□□□ -0.62
UBE2N-203ENST00000549490 MYLIPQ8WY64 445 aa11.19□□□□□ -0.62
UBE2N-203ENST00000549490 SYMPKQ92797 1274 aaKnown RBP11.19□□□□□ -0.62
UBE2N-203ENST00000549490 DDX4Q9NQI0 724 aaKnown RBP11.19□□□□□ -0.62
UBE2N-203ENST00000549490 MORF4L1Q9UBU8 362 aa11.19□□□□□ -0.62
UBE2N-203ENST00000549490 RFX7Q2KHR2 1363 aa11.18□□□□□ -0.62
UBE2N-203ENST00000549490 DOCK3Q8IZD9 2030 aa11.18□□□□□ -0.62
UBE2N-203ENST00000549490 UTYO14607 1347 aa11.18□□□□□ -0.62
UBE2N-203ENST00000549490 SLC5A1P13866 664 aa11.18□□□□□ -0.62
UBE2N-203ENST00000549490 HMGCS2P54868 508 aa11.18□□□□□ -0.62
UBE2N-203ENST00000549490 EXOSC9Q06265 439 aaKnown RBP11.18□□□□□ -0.62
UBE2N-203ENST00000549490 PABPC4Q13310 644 aaKnown RBP eCLIP11.18□□□□□ -0.625e-7■□□□□ 8.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms