RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 FLT1P17948 1338 aa21.36■■□□□ 1.01
RAPGEF3-220ENST00000549347 MAGEB6P1A0A0J9YX57 407 aa21.36■■□□□ 1.01
RAPGEF3-220ENST00000549347 HUNKP57058 714 aa21.36■■□□□ 1.01
RAPGEF3-220ENST00000549347 LRRFIP1Q32MZ4 808 aaKnown RBP21.36■■□□□ 1.01
RAPGEF3-220ENST00000549347 SLFNL1Q499Z3 407 aa21.36■■□□□ 1.01
RAPGEF3-220ENST00000549347 EVI5LQ96CN4 794 aa21.36■■□□□ 1.01
RAPGEF3-220ENST00000549347 HOOK2Q96ED9 719 aa21.36■■□□□ 1.01
RAPGEF3-220ENST00000549347 CCDC136Q96JN2 1154 aa21.36■■□□□ 1.01
RAPGEF3-220ENST00000549347 FSD1Q9BTV5 496 aa21.36■■□□□ 1.01
RAPGEF3-220ENST00000549347 OSBPL5Q9H0X9 879 aaPredicted RBP21.36■■□□□ 1.01
RAPGEF3-220ENST00000549347 PPP1R12BO60237 982 aaPredicted RBP21.35■■□□□ 1.01
RAPGEF3-220ENST00000549347 MOB2Q70IA6 237 aa21.35■■□□□ 1.01
RAPGEF3-220ENST00000549347 SH3BP5LQ7L8J4 393 aa21.35■■□□□ 1.01
RAPGEF3-220ENST00000549347 ARMC9Q7Z3E5 817 aa21.35■■□□□ 1.01
RAPGEF3-220ENST00000549347 DNAJC5GQ8N7S2 189 aa21.35■■□□□ 1.01
RAPGEF3-220ENST00000549347 APPBP2Q92624 585 aa21.35■■□□□ 1.01
RAPGEF3-220ENST00000549347 LAMB1P07942 1786 aa21.35■■□□□ 1.01
RAPGEF3-220ENST00000549347 RNF113AO15541 343 aaKnown RBP21.34■■□□□ 1.01
RAPGEF3-220ENST00000549347 TTLL12Q14166 644 aaPredicted RBP21.34■■□□□ 1.01
RAPGEF3-220ENST00000549347 DEFB115Q30KQ5 88 aa21.34■■□□□ 1.01
RAPGEF3-220ENST00000549347 TICAM2Q86XR7 235 aa21.34■■□□□ 1.01
RAPGEF3-220ENST00000549347 LCORLQ8N3X6 602 aa21.34■■□□□ 1.01
RAPGEF3-220ENST00000549347 TGFBRAP1Q8WUH2 860 aa21.34■■□□□ 1.01
RAPGEF3-220ENST00000549347 MKRN1Q9UHC7 482 aaKnown RBP21.34■■□□□ 1.01
RAPGEF3-220ENST00000549347 ANGEL1Q9UNK9 670 aaKnown RBP21.34■■□□□ 1.01
RAPGEF3-220ENST00000549347 DDTLA6NHG4 134 aaPredicted RBP21.33■■□□□ 1.01
RAPGEF3-220ENST00000549347 LDLRAD1Q5T700 205 aa21.33■■□□□ 1.01
RAPGEF3-220ENST00000549347 DCAF15Q66K64 600 aa21.33■■□□□ 1.01
RAPGEF3-220ENST00000549347 KLRG1Q96E93 195 aa21.33■■□□□ 1.01
RAPGEF3-220ENST00000549347 CSRNP1Q96S65 589 aa21.33■■□□□ 1.01
RAPGEF3-220ENST00000549347 FZD1Q9UP38 647 aa21.33■■□□□ 1.01
RAPGEF3-220ENST00000549347 UNCXA6NJT0 531 aa21.32■■□□□ 1
RAPGEF3-220ENST00000549347 UBE2Q2LH0YL09 131 aa21.32■■□□□ 1
RAPGEF3-220ENST00000549347 USP2O75604 605 aaPredicted RBP21.32■■□□□ 1
RAPGEF3-220ENST00000549347 MBD4O95243 580 aa21.32■■□□□ 1
RAPGEF3-220ENST00000549347 PRKG1Q13976 671 aa21.32■■□□□ 1
RAPGEF3-220ENST00000549347 MAPKAPK5Q8IW41 473 aa21.32■■□□□ 1
RAPGEF3-220ENST00000549347 ZSCAN29Q8IWY8 852 aaPredicted RBP21.32■■□□□ 1
RAPGEF3-220ENST00000549347 CRNKL1Q9BZJ0 848 aaKnown RBP21.32■■□□□ 1
RAPGEF3-220ENST00000549347 PUS7LQ9H0K6 701 aaKnown RBP21.32■■□□□ 1
RAPGEF3-220ENST00000549347 IREB2P48200 963 aaKnown RBP21.31■■□□□ 1
RAPGEF3-220ENST00000549347 RGMBQ6NW40 437 aa21.31■■□□□ 1
RAPGEF3-220ENST00000549347 OSBP2Q969R2 916 aa21.31■■□□□ 1
RAPGEF3-220ENST00000549347 ARMT1Q9H993 441 aa21.31■■□□□ 1
RAPGEF3-220ENST00000549347 BAZ2AQ9UIF9 1905 aaKnown RBP21.3■■□□□ 1
RAPGEF3-220ENST00000549347 ECE1P42892 770 aa21.3■■□□□ 1
RAPGEF3-220ENST00000549347 USP5P45974 858 aa21.3■■□□□ 1
RAPGEF3-220ENST00000549347 ZMYM1Q5SVZ6 1142 aa21.3■■□□□ 1
RAPGEF3-220ENST00000549347 TTC22Q5TAA0 569 aa21.3■■□□□ 1
RAPGEF3-220ENST00000549347 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.3■■□□□ 1
RAPGEF3-220ENST00000549347 AIDAQ96BJ3 306 aa21.3■■□□□ 1
RAPGEF3-220ENST00000549347 DHX36Q9H2U1 1008 aaKnown RBP21.3■■□□□ 1
RAPGEF3-220ENST00000549347 PPP4R2Q9NY27 417 aa21.3■■□□□ 1
RAPGEF3-220ENST00000549347 DOCK1Q14185 1865 aa21.3■■□□□ 1
RAPGEF3-220ENST00000549347 CEP350Q5VT06 3117 aa21.3■■□□□ 1
RAPGEF3-220ENST00000549347 TRIM6-TRIM34B2RNG4 842 aa21.29■■□□□ 1
RAPGEF3-220ENST00000549347 GSPT1P15170 499 aaKnown RBP21.29■■□□□ 1
RAPGEF3-220ENST00000549347 MAP3K10Q02779 954 aa21.29■■□□□ 1
RAPGEF3-220ENST00000549347 CYP4F22Q6NT55 531 aa21.29■■□□□ 1
RAPGEF3-220ENST00000549347 CAPNS2Q96L46 248 aa21.29■■□□□ 1
RAPGEF3-220ENST00000549347 ZNF341Q9BYN7 854 aa21.29■■□□□ 1
RAPGEF3-220ENST00000549347 ATAD5Q96QE3 1844 aa21.28■■□□□ 1
RAPGEF3-220ENST00000549347 SLC10A3P09131 477 aa21.28■■□□□ 1
RAPGEF3-220ENST00000549347 VEGFBP49765 207 aa21.28■■□□□ 1
RAPGEF3-220ENST00000549347 PAXIP1Q6ZW49 1069 aaPredicted RBP21.28■■□□□ 1
RAPGEF3-220ENST00000549347 MIGA2Q7L4E1 593 aa21.28■■□□□ 1
RAPGEF3-220ENST00000549347 RASAL3Q86YV0 1011 aa21.28■■□□□ 1
RAPGEF3-220ENST00000549347 ANKRD13AQ8IZ07 590 aa21.28■■□□□ 1
RAPGEF3-220ENST00000549347 SDR42E1Q8WUS8 393 aa21.28■■□□□ 1
RAPGEF3-220ENST00000549347 RILPL2Q969X0 211 aa21.28■■□□□ 1
RAPGEF3-220ENST00000549347 ZNF112Q9UJU3 913 aa21.28■■□□□ 1
RAPGEF3-220ENST00000549347 WDR33Q9C0J8 1336 aaKnown RBP21.28■■□□□ 1
RAPGEF3-220ENST00000549347 FAM155AB1AL88 458 aaPredicted RBP21.27■■□□□ 1
RAPGEF3-220ENST00000549347 M0R2C6 588 aa21.27■■□□□ 1
RAPGEF3-220ENST00000549347 TBC1D12O60347 775 aa21.27■■□□□ 1
RAPGEF3-220ENST00000549347 ZNF157P51786 506 aaPredicted RBP21.27■■□□□ 1
RAPGEF3-220ENST00000549347 CCDC102AQ96A19 550 aa21.27■■□□□ 1
RAPGEF3-220ENST00000549347 WRNIP1Q96S55 665 aa21.27■■□□□ 1
RAPGEF3-220ENST00000549347 STRBPQ96SI9 672 aaKnown RBP21.27■■□□□ 1
RAPGEF3-220ENST00000549347 DCP1AQ9NPI6 582 aaPredicted RBP21.27■■□□□ 1
RAPGEF3-220ENST00000549347 ATP8A2Q9NTI2 1148 aa21.27■■□□□ 1
RAPGEF3-220ENST00000549347 PI4KBQ9UBF8 816 aa21.27■■□□□ 1
RAPGEF3-220ENST00000549347 GPAA1O43292 621 aa21.26■□□□□ 0.99
RAPGEF3-220ENST00000549347 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.26■□□□□ 0.99
RAPGEF3-220ENST00000549347 METTL16Q86W50 562 aaKnown RBP21.26■□□□□ 0.99
RAPGEF3-220ENST00000549347 CLMNQ96JQ2 1002 aa21.26■□□□□ 0.99
RAPGEF3-220ENST00000549347 SAP30BPQ9UHR5 308 aaKnown RBP21.26■□□□□ 0.99
RAPGEF3-220ENST00000549347 PALD1Q9ULE6 856 aa21.26■□□□□ 0.99
RAPGEF3-220ENST00000549347 PRKAB2O43741 272 aa21.25■□□□□ 0.99
RAPGEF3-220ENST00000549347 HLA-DOAP06340 250 aa21.25■□□□□ 0.99
RAPGEF3-220ENST00000549347 MAP3K9P80192 1104 aa21.25■□□□□ 0.99
RAPGEF3-220ENST00000549347 VGLL4Q14135 290 aa21.25■□□□□ 0.99
RAPGEF3-220ENST00000549347 JMYQ8N9B5 988 aa21.25■□□□□ 0.99
RAPGEF3-220ENST00000549347 SEC62Q99442 399 aaKnown RBP21.25■□□□□ 0.99
RAPGEF3-220ENST00000549347 HERC5Q9UII4 1024 aaKnown RBP21.25■□□□□ 0.99
RAPGEF3-220ENST00000549347 PHF20L1A8MW92 1017 aa21.24■□□□□ 0.99
RAPGEF3-220ENST00000549347 GNAT2P19087 354 aa21.24■□□□□ 0.99
RAPGEF3-220ENST00000549347 NOGQ13253 232 aa21.24■□□□□ 0.99
RAPGEF3-220ENST00000549347 NOL9Q5SY16 702 aaKnown RBP21.24■□□□□ 0.99
RAPGEF3-220ENST00000549347 EHD4Q9H223 541 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms