RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 EIF5P55010 431 aaKnown RBP16.21■□□□□ 0.18
CACNB3-209ENST00000548860 DYNLL1P63167 89 aaKnown RBP16.21■□□□□ 0.18
CACNB3-209ENST00000548860 DHX37Q8IY37 1157 aaKnown RBP16.21■□□□□ 0.18
CACNB3-209ENST00000548860 CAVIN2O95810 425 aa16.2■□□□□ 0.18
CACNB3-209ENST00000548860 CTSWP56202 376 aa16.2■□□□□ 0.18
CACNB3-209ENST00000548860 CCDC150Q8NCX0 1101 aa16.2■□□□□ 0.18
CACNB3-209ENST00000548860 ZNF219Q9P2Y4 722 aaPredicted RBP16.2■□□□□ 0.18
CACNB3-209ENST00000548860 COL15A1P39059 1388 aa16.2■□□□□ 0.18
CACNB3-209ENST00000548860 PIK3AP1Q6ZUJ8 805 aa16.2■□□□□ 0.18
CACNB3-209ENST00000548860 DZIP1Q86YF9 867 aaKnown RBP16.2■□□□□ 0.18
CACNB3-209ENST00000548860 LCORLQ8N3X6 602 aa16.2■□□□□ 0.18
CACNB3-209ENST00000548860 WASF1Q92558 559 aa16.2■□□□□ 0.18
CACNB3-209ENST00000548860 TANGO6Q9C0B7 1094 aa16.2■□□□□ 0.18
CACNB3-209ENST00000548860 PLEKHA4Q9H4M7 779 aa16.2■□□□□ 0.18
CACNB3-209ENST00000548860 RGPD8O14715 1765 aaPredicted RBP16.2■□□□□ 0.18
CACNB3-209ENST00000548860 MED23Q9ULK4 1368 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 FAM205CA6NFA0 338 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 TRIM75PA6NK02 468 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 SMIM22K7EJ46 135 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 EVCP57679 992 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 KRT222Q8N1A0 295 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 RASGRP4Q8TDF6 673 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 BAG1Q99933 345 aaPredicted RBP16.19■□□□□ 0.18
CACNB3-209ENST00000548860 SAMSN1Q9NSI8 373 aaKnown RBP16.19■□□□□ 0.18
CACNB3-209ENST00000548860 MAGEB6P1A0A0J9YX57 407 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 GRIN1Q05586 938 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 USP49Q70CQ1 688 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 TTLL11Q8NHH1 800 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 CAPZA3Q96KX2 299 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 RTEL1Q9NZ71 1219 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 SAP30BPQ9UHR5 308 aaKnown RBP16.19■□□□□ 0.18
CACNB3-209ENST00000548860 PCDHB6Q9Y5E3 794 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 ZSCAN12O43309 604 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 PDE8BO95263 885 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 IQCB1Q15051 598 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 ZBTB38Q8NAP3 1195 aaPredicted RBP16.19■□□□□ 0.18
CACNB3-209ENST00000548860 OXER1Q8TDS5 423 aa16.19■□□□□ 0.18
CACNB3-209ENST00000548860 CCDC196A0A1B0GTZ2 297 aa16.18■□□□□ 0.18
CACNB3-209ENST00000548860 UQCRFS1P1P0C7P4 283 aa16.18■□□□□ 0.18
CACNB3-209ENST00000548860 IDEP14735 1019 aa16.18■□□□□ 0.18
CACNB3-209ENST00000548860 DHX40Q8IX18 779 aaKnown RBP16.18■□□□□ 0.18
CACNB3-209ENST00000548860 RABEP2Q9H5N1 569 aa16.18■□□□□ 0.18
CACNB3-209ENST00000548860 SLAIN2Q9P270 581 aa16.18■□□□□ 0.18
CACNB3-209ENST00000548860 ITSN1Q15811 1721 aa16.18■□□□□ 0.18
CACNB3-209ENST00000548860 NEDD4P46934 1319 aa16.18■□□□□ 0.18
CACNB3-209ENST00000548860 USP42Q9H9J4 1324 aaKnown RBP16.18■□□□□ 0.18
CACNB3-209ENST00000548860 HEG1Q9ULI3 1381 aa16.18■□□□□ 0.18
CACNB3-209ENST00000548860 TECPR2O15040 1411 aa16.18■□□□□ 0.18
CACNB3-209ENST00000548860 ZNF569Q5MCW4 686 aa16.18■□□□□ 0.18
CACNB3-209ENST00000548860 PLA2G4DQ86XP0 818 aa16.18■□□□□ 0.18
CACNB3-209ENST00000548860 FMR1NBQ8N0W7 255 aaPredicted RBP16.18■□□□□ 0.18
CACNB3-209ENST00000548860 MCM9Q9NXL9 1143 aa16.18■□□□□ 0.18
CACNB3-209ENST00000548860 WTIPA6NIX2 430 aaPredicted RBP16.18■□□□□ 0.18
CACNB3-209ENST00000548860 EIF6P56537 245 aaKnown RBP16.18■□□□□ 0.18
CACNB3-209ENST00000548860 HEATR3Q7Z4Q2 680 aa16.18■□□□□ 0.18
CACNB3-209ENST00000548860 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.18■□□□□ 0.18
CACNB3-209ENST00000548860 ESR2Q92731 530 aa16.18■□□□□ 0.18
CACNB3-209ENST00000548860 EPSTI1Q96J88 318 aa16.18■□□□□ 0.18
CACNB3-209ENST00000548860 IRX2Q9BZI1 471 aaPredicted RBP16.18■□□□□ 0.18
CACNB3-209ENST00000548860 RASGRF1Q13972 1273 aa16.17■□□□□ 0.18
CACNB3-209ENST00000548860 PUM3Q15397 648 aaKnown RBP16.17■□□□□ 0.18
CACNB3-209ENST00000548860 NLRP10Q86W26 655 aa16.17■□□□□ 0.18
CACNB3-209ENST00000548860 DIP2AQ14689 1571 aa16.17■□□□□ 0.18
CACNB3-209ENST00000548860 USP17L12C9JPN9 530 aa16.17■□□□□ 0.18
CACNB3-209ENST00000548860 USP17L21D6R901 530 aa16.17■□□□□ 0.18
CACNB3-209ENST00000548860 TXLNAP40222 546 aa16.17■□□□□ 0.18
CACNB3-209ENST00000548860 GOLGA6L1Q8N7Z2 621 aa16.17■□□□□ 0.18
CACNB3-209ENST00000548860 PSMB7Q99436 277 aa16.17■□□□□ 0.18
CACNB3-209ENST00000548860 GUCA1BQ9UMX6 200 aa16.17■□□□□ 0.18
CACNB3-209ENST00000548860 EXOSC10Q01780 885 aaKnown RBP16.17■□□□□ 0.18
CACNB3-209ENST00000548860 IKQ13123 557 aaPredicted RBP16.17■□□□□ 0.18
CACNB3-209ENST00000548860 AKNAD1Q5T1N1 836 aa16.17■□□□□ 0.18
CACNB3-209ENST00000548860 AMOTL1Q8IY63 956 aa16.17■□□□□ 0.18
CACNB3-209ENST00000548860 ZNF397Q8NF99 534 aaPredicted RBP16.17■□□□□ 0.18
CACNB3-209ENST00000548860 PPP1R13BQ96KQ4 1090 aa16.17■□□□□ 0.18
CACNB3-209ENST00000548860 DACH1Q9UI36 760 aa16.17■□□□□ 0.18
CACNB3-209ENST00000548860 CTNND2Q9UQB3 1225 aa16.17■□□□□ 0.18
CACNB3-209ENST00000548860 SH3TC1Q8TE82 1336 aa16.17■□□□□ 0.18
CACNB3-209ENST00000548860 PDE8AO60658 829 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 GYS2P54840 703 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 ANTXR2P58335 489 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 POSTNQ15063 836 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 CCDC152Q4G0S7 254 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 FBXO38Q6PIJ6 1188 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 MRFAP1L1Q96HT8 127 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 TAB2Q9NYJ8 693 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 MAGEC2Q9UBF1 373 aaPredicted RBP16.16■□□□□ 0.18
CACNB3-209ENST00000548860 YEATS4O95619 227 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 KRT23Q9C075 422 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 CPVLQ9H3G5 476 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 KIF5CO60282 957 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 NMT2O60551 498 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 ADD2P35612 726 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 KIAA1328Q86T90 577 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 ANKRD18AQ8IVF6 992 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 ZNF654Q8IZM8 581 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 SMARCC2Q8TAQ2 1214 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 CCDC194A0A1B0GVG4 234 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 PRR29P0C7W0 189 aa16.16■□□□□ 0.18
CACNB3-209ENST00000548860 GPKOWQ92917 476 aaPredicted RBP eCLIP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms