RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 RASGRF1Q13972 1273 aa11.83□□□□□ -0.52
GCN1-205ENST00000548821 TTC39AQ5SRH9 613 aa11.83□□□□□ -0.52
GCN1-205ENST00000548821 ERC1Q8IUD2 1116 aa11.83□□□□□ -0.52
GCN1-205ENST00000548821 SCYL3Q8IZE3 742 aa11.83□□□□□ -0.52
GCN1-205ENST00000548821 FAM43AQ8N2R8 423 aa11.83□□□□□ -0.52
GCN1-205ENST00000548821 NKX2-3Q8TAU0 364 aa11.83□□□□□ -0.52
GCN1-205ENST00000548821 TRIM34Q9BYJ4 488 aa11.83□□□□□ -0.52
GCN1-205ENST00000548821 DHX36Q9H2U1 1008 aaKnown RBP11.83□□□□□ -0.52
GCN1-205ENST00000548821 PNMA3Q9UL41 463 aa11.83□□□□□ -0.52
GCN1-205ENST00000548821 SLC45A1Q9Y2W3 748 aa11.83□□□□□ -0.52
GCN1-205ENST00000548821 MROH7-TTC4A0A0A0MT08 1334 aa11.83□□□□□ -0.52
GCN1-205ENST00000548821 PDHXO00330 501 aa11.82□□□□□ -0.52
GCN1-205ENST00000548821 FMNL1O95466 1100 aaPredicted RBP11.82□□□□□ -0.52
GCN1-205ENST00000548821 LACTBP83111 547 aaPredicted RBP11.82□□□□□ -0.52
GCN1-205ENST00000548821 ATP8B2P98198 1209 aa11.82□□□□□ -0.52
GCN1-205ENST00000548821 MECOMQ03112 1051 aa11.82□□□□□ -0.52
GCN1-205ENST00000548821 SLC4A8Q2Y0W8 1093 aa11.82□□□□□ -0.52
GCN1-205ENST00000548821 DIEXFQ68CQ4 756 aaKnown RBP11.82□□□□□ -0.52
GCN1-205ENST00000548821 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.82□□□□□ -0.52
GCN1-205ENST00000548821 CLUAP1Q96AJ1 413 aa11.82□□□□□ -0.52
GCN1-205ENST00000548821 OSBPL5Q9H0X9 879 aaPredicted RBP11.82□□□□□ -0.52
GCN1-205ENST00000548821 FAM198AQ9UFP1 575 aa11.82□□□□□ -0.52
GCN1-205ENST00000548821 ZHX2Q9Y6X8 837 aa11.82□□□□□ -0.52
GCN1-205ENST00000548821 ARAP2Q8WZ64 1704 aa11.82□□□□□ -0.52
GCN1-205ENST00000548821 SURF6O75683 361 aaKnown RBP11.81□□□□□ -0.52
GCN1-205ENST00000548821 BCAR3O75815 825 aa11.81□□□□□ -0.52
GCN1-205ENST00000548821 ARID4AP29374 1257 aaPredicted RBP11.81□□□□□ -0.52
GCN1-205ENST00000548821 ADORA1P30542 326 aa11.81□□□□□ -0.52
GCN1-205ENST00000548821 INPP5BP32019 993 aa11.81□□□□□ -0.52
GCN1-205ENST00000548821 MAP3K10Q02779 954 aa11.81□□□□□ -0.52
GCN1-205ENST00000548821 NFIAQ12857 509 aa11.81□□□□□ -0.52
GCN1-205ENST00000548821 PICALMQ13492 652 aa11.81□□□□□ -0.52
GCN1-205ENST00000548821 CDAN1Q8IWY9 1227 aa11.81□□□□□ -0.52
GCN1-205ENST00000548821 CNKSR2Q8WXI2 1034 aa11.81□□□□□ -0.52
GCN1-205ENST00000548821 ZNF512BQ96KM6 892 aaPredicted RBP11.81□□□□□ -0.52
GCN1-205ENST00000548821 TRIM47Q96LD4 638 aa11.81□□□□□ -0.52
GCN1-205ENST00000548821 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.81□□□□□ -0.52
GCN1-205ENST00000548821 AS3MTQ9HBK9 375 aa11.81□□□□□ -0.52
GCN1-205ENST00000548821 GINM1Q9NU53 330 aa11.81□□□□□ -0.52
GCN1-205ENST00000548821 HMG20BQ9P0W2 317 aa11.81□□□□□ -0.52
GCN1-205ENST00000548821 HERC5Q9UII4 1024 aaKnown RBP11.81□□□□□ -0.52
GCN1-205ENST00000548821 FCGRTP55899 365 aa11.8□□□□□ -0.52
GCN1-205ENST00000548821 UBXN2AP68543 259 aa11.8□□□□□ -0.52
GCN1-205ENST00000548821 NAA16Q6N069 864 aaPredicted RBP11.8□□□□□ -0.52
GCN1-205ENST00000548821 C17orf99Q6UX52 265 aa11.8□□□□□ -0.52
GCN1-205ENST00000548821 ITPRIPQ8IWB1 547 aa11.8□□□□□ -0.52
GCN1-205ENST00000548821 RAET1EQ8TD07 263 aa11.8□□□□□ -0.52
GCN1-205ENST00000548821 SSH3Q8TE77 659 aa11.8□□□□□ -0.52
GCN1-205ENST00000548821 SMCR8Q8TEV9 937 aaPredicted RBP11.8□□□□□ -0.52
GCN1-205ENST00000548821 PI4KBQ9UBF8 816 aa11.8□□□□□ -0.52
GCN1-205ENST00000548821 PTPRAP18433 802 aa11.79□□□□□ -0.52
GCN1-205ENST00000548821 PSMC4P43686 418 aa11.79□□□□□ -0.52
GCN1-205ENST00000548821 FOXP4Q8IVH2 680 aaPredicted RBP11.79□□□□□ -0.52
GCN1-205ENST00000548821 TEX11Q8IYF3 940 aa11.79□□□□□ -0.52
GCN1-205ENST00000548821 TMEM57Q8N5G2 664 aa11.79□□□□□ -0.52
GCN1-205ENST00000548821 NSUN4Q96CB9 384 aaKnown RBP11.79□□□□□ -0.52
GCN1-205ENST00000548821 A0A0G2JLL6 359 aaPredicted RBP11.78□□□□□ -0.52
GCN1-205ENST00000548821 PHF20L1A8MW92 1017 aa11.78□□□□□ -0.52
GCN1-205ENST00000548821 HMMRO75330 724 aa11.78□□□□□ -0.52
GCN1-205ENST00000548821 HLA-DOAP06340 250 aa11.78□□□□□ -0.52
GCN1-205ENST00000548821 OSBPP22059 807 aa11.78□□□□□ -0.52
GCN1-205ENST00000548821 POLA2Q14181 598 aa11.78□□□□□ -0.52
GCN1-205ENST00000548821 TNNI3KQ59H18 835 aa11.78□□□□□ -0.52
GCN1-205ENST00000548821 GADL1Q6ZQY3 521 aa11.78□□□□□ -0.52
GCN1-205ENST00000548821 PRRT2Q7Z6L0 340 aaPredicted RBP11.78□□□□□ -0.52
GCN1-205ENST00000548821 PROCA1Q8NCQ7 364 aaPredicted RBP11.78□□□□□ -0.52
GCN1-205ENST00000548821 ZNF333Q96JL9 665 aa11.78□□□□□ -0.52
GCN1-205ENST00000548821 PCDH10Q9P2E7 1040 aa11.78□□□□□ -0.52
GCN1-205ENST00000548821 BIN2Q9UBW5 565 aaPredicted RBP11.78□□□□□ -0.52
GCN1-205ENST00000548821 SRRDQ9UH36 339 aa11.78□□□□□ -0.52
GCN1-205ENST00000548821 NOP58Q9Y2X3 529 aaKnown RBP11.78□□□□□ -0.52
GCN1-205ENST00000548821 AFG3L2Q9Y4W6 797 aa11.78□□□□□ -0.52
GCN1-205ENST00000548821 FPGT-TNNI3KV9GXZ4 949 aa11.78□□□□□ -0.52
GCN1-205ENST00000548821 PNMA6EA0A0J9YXQ4 647 aa11.77□□□□□ -0.53
GCN1-205ENST00000548821 USP17L5A8MUK1 530 aa11.77□□□□□ -0.53
GCN1-205ENST00000548821 ASNSP08243 561 aa11.77□□□□□ -0.53
GCN1-205ENST00000548821 GCLCP48506 637 aaPredicted RBP11.77□□□□□ -0.53
GCN1-205ENST00000548821 PPP4CP60510 307 aa11.77□□□□□ -0.53
GCN1-205ENST00000548821 MAP3K12Q12852 859 aa11.77□□□□□ -0.53
GCN1-205ENST00000548821 TTF1Q15361 905 aaPredicted RBP11.77□□□□□ -0.53
GCN1-205ENST00000548821 CRACR2BQ8N4Y2 399 aaPredicted RBP11.77□□□□□ -0.53
GCN1-205ENST00000548821 SLAIN1Q8ND83 568 aa11.77□□□□□ -0.53
GCN1-205ENST00000548821 COA7Q96BR5 231 aa11.77□□□□□ -0.53
GCN1-205ENST00000548821 CPA4Q9UI42 421 aa11.77□□□□□ -0.53
GCN1-205ENST00000548821 PTCH2Q9Y6C5 1203 aa11.77□□□□□ -0.53
GCN1-205ENST00000548821 ATRNL1Q5VV63 1379 aa11.77□□□□□ -0.53
GCN1-205ENST00000548821 DDTLA6NHG4 134 aaPredicted RBP11.76□□□□□ -0.53
GCN1-205ENST00000548821 ZBTB7BO15156 539 aaPredicted RBP11.76□□□□□ -0.53
GCN1-205ENST00000548821 SLC34A2O95436 690 aa11.76□□□□□ -0.53
GCN1-205ENST00000548821 GRK4P32298 578 aa11.76□□□□□ -0.53
GCN1-205ENST00000548821 ZFPM1Q8IX07 1006 aa11.76□□□□□ -0.53
GCN1-205ENST00000548821 ZNF280CQ8ND82 737 aa11.76□□□□□ -0.53
GCN1-205ENST00000548821 TMOD4Q9NZQ9 345 aa11.76□□□□□ -0.53
GCN1-205ENST00000548821 AGTPBP1Q9UPW5 1226 aa11.76□□□□□ -0.53
GCN1-205ENST00000548821 ZBED9Q6R2W3 1325 aa11.76□□□□□ -0.53
GCN1-205ENST00000548821 COL2A1P02458 1487 aaPredicted RBP11.76□□□□□ -0.53
GCN1-205ENST00000548821 LAMB1P07942 1786 aa11.75□□□□□ -0.53
GCN1-205ENST00000548821 TRIM75PA6NK02 468 aa11.75□□□□□ -0.53
GCN1-205ENST00000548821 C19orf81C9J6K1 198 aa11.75□□□□□ -0.53
GCN1-205ENST00000548821 CAP2P40123 477 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms