RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 SYNGAP1Q96PV0 1343 aa10.67□□□□□ -0.7
TROAP-208ENST00000548817 SNAP23O00161 211 aa10.67□□□□□ -0.7
TROAP-208ENST00000548817 GRM8O00222 908 aa10.67□□□□□ -0.7
TROAP-208ENST00000548817 COL6A1P12109 1028 aa10.67□□□□□ -0.7
TROAP-208ENST00000548817 BEND3Q5T5X7 828 aa10.67□□□□□ -0.7
TROAP-208ENST00000548817 VPS37DQ86XT2 251 aa10.67□□□□□ -0.7
TROAP-208ENST00000548817 TDRD7Q8NHU6 1098 aaKnown RBP10.67□□□□□ -0.7
TROAP-208ENST00000548817 ZNF594Q96JF6 807 aaPredicted RBP10.67□□□□□ -0.7
TROAP-208ENST00000548817 MRIQ9BWK5 157 aa10.67□□□□□ -0.7
TROAP-208ENST00000548817 SRCIN1Q9C0H9 1055 aa10.67□□□□□ -0.7
TROAP-208ENST00000548817 SEMA6BQ9H3T3 888 aa10.67□□□□□ -0.7
TROAP-208ENST00000548817 JAG2Q9Y219 1238 aa10.67□□□□□ -0.7
TROAP-208ENST00000548817 CDH23Q9H251 3354 aa10.66□□□□□ -0.7
TROAP-208ENST00000548817 TMEM265A0A087WTH1 108 aa10.66□□□□□ -0.7
TROAP-208ENST00000548817 FRAT2O75474 233 aaPredicted RBP10.66□□□□□ -0.7
TROAP-208ENST00000548817 ALDH1L1O75891 902 aa10.66□□□□□ -0.7
TROAP-208ENST00000548817 FOSL2P15408 326 aa10.66□□□□□ -0.7
TROAP-208ENST00000548817 HIBADHP31937 336 aaKnown RBP10.66□□□□□ -0.7
TROAP-208ENST00000548817 INPP5BP32019 993 aa10.66□□□□□ -0.7
TROAP-208ENST00000548817 MDM2Q00987 491 aaPredicted RBP10.66□□□□□ -0.7
TROAP-208ENST00000548817 UBE4AQ14139 1066 aa10.66□□□□□ -0.7
TROAP-208ENST00000548817 SMCR8Q8TEV9 937 aaPredicted RBP10.66□□□□□ -0.7
TROAP-208ENST00000548817 TEKT1Q969V4 418 aa10.66□□□□□ -0.7
TROAP-208ENST00000548817 DOCK3Q8IZD9 2030 aa10.65□□□□□ -0.7
TROAP-208ENST00000548817 A0A0G2JLL6 359 aaPredicted RBP10.65□□□□□ -0.7
TROAP-208ENST00000548817 FAM110CQ1W6H9 321 aa10.65□□□□□ -0.7
TROAP-208ENST00000548817 PRRT2Q7Z6L0 340 aaPredicted RBP10.65□□□□□ -0.7
TROAP-208ENST00000548817 TBC1D22AQ8WUA7 517 aa10.65□□□□□ -0.7
TROAP-208ENST00000548817 MYLIPQ8WY64 445 aa10.65□□□□□ -0.7
TROAP-208ENST00000548817 ZDHHC15Q96MV8 337 aa10.65□□□□□ -0.7
TROAP-208ENST00000548817 RAPGEFL1Q9UHV5 662 aa10.65□□□□□ -0.7
TROAP-208ENST00000548817 TAOK2Q9UL54 1235 aa10.65□□□□□ -0.7
TROAP-208ENST00000548817 MAST3O60307 1309 aa10.64□□□□□ -0.71
TROAP-208ENST00000548817 SMAD3P84022 425 aaKnown RBP10.64□□□□□ -0.71
TROAP-208ENST00000548817 MAP3K12Q12852 859 aa10.64□□□□□ -0.71
TROAP-208ENST00000548817 CAVIN4Q5BKX8 364 aa10.64□□□□□ -0.71
TROAP-208ENST00000548817 EPHA10Q5JZY3 1008 aa10.64□□□□□ -0.71
TROAP-208ENST00000548817 MAP3K21Q5TCX8 1036 aa10.64□□□□□ -0.71
TROAP-208ENST00000548817 MAST2Q6P0Q8 1798 aa10.64□□□□□ -0.71
TROAP-208ENST00000548817 MROH5Q6ZUA9 1318 aa10.63□□□□□ -0.71
TROAP-208ENST00000548817 PTPRFP10586 1907 aa10.63□□□□□ -0.71
TROAP-208ENST00000548817 GYG1P46976 350 aa10.63□□□□□ -0.71
TROAP-208ENST00000548817 CACNB3P54284 484 aa10.63□□□□□ -0.71
TROAP-208ENST00000548817 MIGA2Q7L4E1 593 aa10.63□□□□□ -0.71
TROAP-208ENST00000548817 FAM9BQ8IZU0 186 aa10.63□□□□□ -0.71
TROAP-208ENST00000548817 FAM151AQ8WW52 585 aa10.63□□□□□ -0.71
TROAP-208ENST00000548817 PNMA3Q9UL41 463 aa10.63□□□□□ -0.71
TROAP-208ENST00000548817 SUGT1Q9Y2Z0 365 aa10.63□□□□□ -0.71
TROAP-208ENST00000548817 GCLCP48506 637 aaPredicted RBP10.62□□□□□ -0.71
TROAP-208ENST00000548817 CHAF1AQ13111 956 aaPredicted RBP10.62□□□□□ -0.71
TROAP-208ENST00000548817 LRRC26Q2I0M4 334 aa10.62□□□□□ -0.71
TROAP-208ENST00000548817 METTL24Q5JXM2 366 aa10.62□□□□□ -0.71
TROAP-208ENST00000548817 HHIPL2Q6UWX4 724 aa10.62□□□□□ -0.71
TROAP-208ENST00000548817 TRMT44Q8IYL2 757 aaKnown RBP10.62□□□□□ -0.71
TROAP-208ENST00000548817 ATXN2LQ8WWM7 1075 aaKnown RBP10.62□□□□□ -0.71
TROAP-208ENST00000548817 FAM84BQ96KN1 310 aaPredicted RBP10.62□□□□□ -0.71
TROAP-208ENST00000548817 TTYH1Q9H313 450 aaPredicted RBP10.62□□□□□ -0.71
TROAP-208ENST00000548817 LTBP2Q14767 1821 aa10.62□□□□□ -0.71
TROAP-208ENST00000548817 DNAH12Q6ZR08 3092 aa10.61□□□□□ -0.71
TROAP-208ENST00000548817 APOBEC3HQ6NTF7 200 aaKnown RBP10.61□□□□□ -0.71
TROAP-208ENST00000548817 SUCLG2Q96I99 432 aa10.61□□□□□ -0.71
TROAP-208ENST00000548817 C1QTNF1Q9BXJ1 281 aa10.61□□□□□ -0.71
TROAP-208ENST00000548817 PUS3Q9BZE2 481 aaKnown RBP10.61□□□□□ -0.71
TROAP-208ENST00000548817 PICK1Q9NRD5 415 aa10.61□□□□□ -0.71
TROAP-208ENST00000548817 PRKAG2Q9UGJ0 569 aa10.61□□□□□ -0.71
TROAP-208ENST00000548817 GJD2Q9UKL4 321 aa10.61□□□□□ -0.71
TROAP-208ENST00000548817 AGTPBP1Q9UPW5 1226 aa10.61□□□□□ -0.71
TROAP-208ENST00000548817 XRCC5P13010 732 aaKnown RBP10.6□□□□□ -0.71
TROAP-208ENST00000548817 PRKAR2AP13861 404 aaKnown RBP10.6□□□□□ -0.71
TROAP-208ENST00000548817 GADL1Q6ZQY3 521 aa10.6□□□□□ -0.71
TROAP-208ENST00000548817 SCYL3Q8IZE3 742 aa10.6□□□□□ -0.71
TROAP-208ENST00000548817 ANKRD13CQ8N6S4 541 aa10.6□□□□□ -0.71
TROAP-208ENST00000548817 SPINK5Q9NQ38 1064 aaPredicted RBP10.6□□□□□ -0.71
TROAP-208ENST00000548817 IQSEC3Q9UPP2 1182 aaPredicted RBP10.6□□□□□ -0.71
TROAP-208ENST00000548817 AFG3L2Q9Y4W6 797 aa10.6□□□□□ -0.71
TROAP-208ENST00000548817 ZHX2Q9Y6X8 837 aa10.6□□□□□ -0.71
TROAP-208ENST00000548817 AK9Q5TCS8 1911 aa10.59□□□□□ -0.71
TROAP-208ENST00000548817 ZNF316A6NFI3 1004 aaPredicted RBP10.59□□□□□ -0.71
TROAP-208ENST00000548817 IFIT1P09914 478 aaKnown RBP10.59□□□□□ -0.71
TROAP-208ENST00000548817 NBPF7P0C2Y1 421 aaPredicted RBP10.59□□□□□ -0.71
TROAP-208ENST00000548817 TRIM32Q13049 653 aa10.59□□□□□ -0.71
TROAP-208ENST00000548817 FBXO33Q7Z6M2 555 aa10.59□□□□□ -0.71
TROAP-208ENST00000548817 SOCS4Q8WXH5 440 aa10.59□□□□□ -0.71
TROAP-208ENST00000548817 TRIB2Q92519 343 aa10.59□□□□□ -0.71
TROAP-208ENST00000548817 BICC1Q9H694 974 aaKnown RBP10.59□□□□□ -0.71
TROAP-208ENST00000548817 PLXNB2O15031 1838 aa10.58□□□□□ -0.72
TROAP-208ENST00000548817 DOCK2Q92608 1830 aa10.58□□□□□ -0.72
TROAP-208ENST00000548817 PDE8BO95263 885 aa10.58□□□□□ -0.72
TROAP-208ENST00000548817 PTPRAP18433 802 aa10.58□□□□□ -0.72
TROAP-208ENST00000548817 PABPC4Q13310 644 aaKnown RBP eCLIP10.58□□□□□ -0.72
TROAP-208ENST00000548817 SHHQ15465 462 aa10.58□□□□□ -0.72
TROAP-208ENST00000548817 GRIK5Q16478 980 aa10.58□□□□□ -0.72
TROAP-208ENST00000548817 LHX8Q68G74 356 aa10.58□□□□□ -0.72
TROAP-208ENST00000548817 PROCA1Q8NCQ7 364 aaPredicted RBP10.58□□□□□ -0.72
TROAP-208ENST00000548817 HCN4Q9Y3Q4 1203 aa10.58□□□□□ -0.72
TROAP-208ENST00000548817 UTYO14607 1347 aa10.58□□□□□ -0.72
TROAP-208ENST00000548817 PTPRCP08575 1304 aa10.58□□□□□ -0.72
TROAP-208ENST00000548817 DOCK1Q14185 1865 aa10.57□□□□□ -0.72
TROAP-208ENST00000548817 ATRNL1Q5VV63 1379 aa10.57□□□□□ -0.72
TROAP-208ENST00000548817 FRMPD3Q5JV73 1810 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms