RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 MEIS3Q99687 375 aa20.49■□□□□ 0.87
SSH1-208ENST00000548522 FBXO3Q9UK99 471 aa20.49■□□□□ 0.87
SSH1-208ENST00000548522 NOB1Q9ULX3 412 aaKnown RBP20.49■□□□□ 0.87
SSH1-208ENST00000548522 GABRQQ9UN88 632 aa20.49■□□□□ 0.87
SSH1-208ENST00000548522 A0A0G2JLL6 359 aaPredicted RBP20.48■□□□□ 0.87
SSH1-208ENST00000548522 DDTLA6NHG4 134 aaPredicted RBP20.48■□□□□ 0.87
SSH1-208ENST00000548522 SEMA3EO15041 775 aa20.48■□□□□ 0.87
SSH1-208ENST00000548522 PTPRAP18433 802 aa20.48■□□□□ 0.87
SSH1-208ENST00000548522 PRRT2Q7Z6L0 340 aaPredicted RBP20.48■□□□□ 0.87
SSH1-208ENST00000548522 IDI2Q9BXS1 227 aa20.48■□□□□ 0.87
SSH1-208ENST00000548522 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.48■□□□□ 0.87
SSH1-208ENST00000548522 CXCL11O14625 94 aa20.47■□□□□ 0.87
SSH1-208ENST00000548522 PICALMQ13492 652 aa20.47■□□□□ 0.87
SSH1-208ENST00000548522 CHRDL2Q6WN34 429 aa20.47■□□□□ 0.87
SSH1-208ENST00000548522 UBE2Q1Q7Z7E8 422 aa20.47■□□□□ 0.87
SSH1-208ENST00000548522 DZIP1Q86YF9 867 aaKnown RBP20.47■□□□□ 0.87
SSH1-208ENST00000548522 PICK1Q9NRD5 415 aa20.47■□□□□ 0.87
SSH1-208ENST00000548522 AK9Q5TCS8 1911 aa20.47■□□□□ 0.87
SSH1-208ENST00000548522 ENTPD3O75355 529 aa20.46■□□□□ 0.87
SSH1-208ENST00000548522 HOXD10P28358 340 aa20.46■□□□□ 0.87
SSH1-208ENST00000548522 FCGRTP55899 365 aa20.46■□□□□ 0.87
SSH1-208ENST00000548522 TIMM10P62072 90 aa20.46■□□□□ 0.87
SSH1-208ENST00000548522 GADL1Q6ZQY3 521 aa20.46■□□□□ 0.87
SSH1-208ENST00000548522 ZSCAN29Q8IWY8 852 aaPredicted RBP20.46■□□□□ 0.87
SSH1-208ENST00000548522 ZNF384Q8TF68 577 aa20.46■□□□□ 0.87
SSH1-208ENST00000548522 COPRSQ9NQ92 184 aa20.46■□□□□ 0.87
SSH1-208ENST00000548522 ABCF2Q9UG63 623 aa20.46■□□□□ 0.87
SSH1-208ENST00000548522 AFG3L2Q9Y4W6 797 aa20.46■□□□□ 0.87
SSH1-208ENST00000548522 FAM196BA6NMK8 535 aa20.45■□□□□ 0.86
SSH1-208ENST00000548522 BTDP43251 543 aa20.45■□□□□ 0.86
SSH1-208ENST00000548522 GJA8P48165 433 aa20.45■□□□□ 0.86
SSH1-208ENST00000548522 TRMT2AQ8IZ69 625 aaKnown RBP20.45■□□□□ 0.86
SSH1-208ENST00000548522 RNF208Q9H0X6 261 aa20.45■□□□□ 0.86
SSH1-208ENST00000548522 UNC93B1Q9H1C4 597 aa20.45■□□□□ 0.86
SSH1-208ENST00000548522 BIN2Q9UBW5 565 aaPredicted RBP20.45■□□□□ 0.86
SSH1-208ENST00000548522 TRIM75PA6NK02 468 aa20.44■□□□□ 0.86
SSH1-208ENST00000548522 GJB1P08034 283 aa20.44■□□□□ 0.86
SSH1-208ENST00000548522 ELNP15502 786 aa20.44■□□□□ 0.86
SSH1-208ENST00000548522 PI16Q6UXB8 463 aa20.44■□□□□ 0.86
SSH1-208ENST00000548522 DPF3Q92784 378 aa20.44■□□□□ 0.86
SSH1-208ENST00000548522 MYH2Q9UKX2 1941 aa20.44■□□□□ 0.86
SSH1-208ENST00000548522 MROH7-TTC4A0A0A0MT08 1334 aa20.44■□□□□ 0.86
SSH1-208ENST00000548522 A0A1B0GUL7 405 aa20.43■□□□□ 0.86
SSH1-208ENST00000548522 RHBDL3P58872 404 aa20.43■□□□□ 0.86
SSH1-208ENST00000548522 MAP3K10Q02779 954 aa20.43■□□□□ 0.86
SSH1-208ENST00000548522 TFCP2Q12800 502 aa20.43■□□□□ 0.86
SSH1-208ENST00000548522 FASTKD5Q7L8L6 764 aaKnown RBP20.43■□□□□ 0.86
SSH1-208ENST00000548522 ZGPATQ8N5A5 531 aaKnown RBP20.43■□□□□ 0.86
SSH1-208ENST00000548522 U2AF1L4Q8WU68 220 aaKnown RBP20.43■□□□□ 0.86
SSH1-208ENST00000548522 RBM27Q9P2N5 1060 aaKnown RBP20.43■□□□□ 0.86
SSH1-208ENST00000548522 DOCK1Q14185 1865 aa20.43■□□□□ 0.86
SSH1-208ENST00000548522 ZBTB22O15209 634 aa20.42■□□□□ 0.86
SSH1-208ENST00000548522 FLT3LGP49771 235 aa20.42■□□□□ 0.86
SSH1-208ENST00000548522 MECOMQ03112 1051 aa20.42■□□□□ 0.86
SSH1-208ENST00000548522 TREML2Q5T2D2 321 aa20.42■□□□□ 0.86
SSH1-208ENST00000548522 SLAIN1Q8ND83 568 aa20.42■□□□□ 0.86
SSH1-208ENST00000548522 XAGE2Q96GT9 111 aa20.42■□□□□ 0.86
SSH1-208ENST00000548522 API5Q9BZZ5 524 aaKnown RBP20.42■□□□□ 0.86
SSH1-208ENST00000548522 PDS5AQ29RF7 1337 aaKnown RBP20.42■□□□□ 0.86
SSH1-208ENST00000548522 PHIPQ8WWQ0 1821 aa20.41■□□□□ 0.86
SSH1-208ENST00000548522 PTPRFP10586 1907 aa20.41■□□□□ 0.86
SSH1-208ENST00000548522 UBXN2AP68543 259 aa20.41■□□□□ 0.86
SSH1-208ENST00000548522 NKX2-3Q8TAU0 364 aa20.41■□□□□ 0.86
SSH1-208ENST00000548522 SRGAP3O43295 1099 aa20.4■□□□□ 0.86
SSH1-208ENST00000548522 MGAMO43451 1857 aa20.4■□□□□ 0.86
SSH1-208ENST00000548522 ADCY3O60266 1144 aa20.4■□□□□ 0.86
SSH1-208ENST00000548522 CTNND1O60716 968 aaKnown RBP20.4■□□□□ 0.86
SSH1-208ENST00000548522 FARP2O94887 1054 aaPredicted RBP20.4■□□□□ 0.86
SSH1-208ENST00000548522 INHAP05111 366 aa20.4■□□□□ 0.86
SSH1-208ENST00000548522 SMCR8Q8TEV9 937 aaPredicted RBP20.4■□□□□ 0.86
SSH1-208ENST00000548522 FAM163AQ96GL9 167 aaPredicted RBP20.4■□□□□ 0.86
SSH1-208ENST00000548522 GPR75-ASB3A0A0A6YYF3 556 aa20.39■□□□□ 0.85
SSH1-208ENST00000548522 TNPO2O14787 897 aaKnown RBP20.39■□□□□ 0.85
SSH1-208ENST00000548522 TBC1D9Q6ZT07 1266 aa20.39■□□□□ 0.85
SSH1-208ENST00000548522 ANKRD13CQ8N6S4 541 aa20.39■□□□□ 0.85
SSH1-208ENST00000548522 HMG20BQ9P0W2 317 aa20.39■□□□□ 0.85
SSH1-208ENST00000548522 AGTPBP1Q9UPW5 1226 aa20.39■□□□□ 0.85
SSH1-208ENST00000548522 SLC45A1Q9Y2W3 748 aa20.39■□□□□ 0.85
SSH1-208ENST00000548522 RRP1BQ14684 758 aaKnown RBP20.38■□□□□ 0.85
SSH1-208ENST00000548522 MVPQ14764 893 aaKnown RBP20.38■□□□□ 0.85
SSH1-208ENST00000548522 TAOK2Q9UL54 1235 aa20.38■□□□□ 0.85
SSH1-208ENST00000548522 TNNQ9UQP3 1299 aa20.38■□□□□ 0.85
SSH1-208ENST00000548522 RARSP54136 660 aaKnown RBP20.37■□□□□ 0.85
SSH1-208ENST00000548522 SPTY2D1Q68D10 685 aaPredicted RBP20.37■□□□□ 0.85
SSH1-208ENST00000548522 ERICH6Q7L0X2 663 aa20.37■□□□□ 0.85
SSH1-208ENST00000548522 SLF2Q8IX21 1173 aa20.37■□□□□ 0.85
SSH1-208ENST00000548522 NSUN4Q96CB9 384 aaKnown RBP20.37■□□□□ 0.85
SSH1-208ENST00000548522 NEUROD6Q96NK8 337 aa20.37■□□□□ 0.85
SSH1-208ENST00000548522 PRO3102Q9H379 93 aa20.37■□□□□ 0.85
SSH1-208ENST00000548522 SGPL1O95470 568 aa20.36■□□□□ 0.85
SSH1-208ENST00000548522 CT47B1P0C2W7 299 aaPredicted RBP20.36■□□□□ 0.85
SSH1-208ENST00000548522 MTX1Q13505 466 aa20.36■□□□□ 0.85
SSH1-208ENST00000548522 MIER1Q8N108 512 aa20.36■□□□□ 0.85
SSH1-208ENST00000548522 DEFB118Q96PH6 123 aa20.36■□□□□ 0.85
SSH1-208ENST00000548522 HTATIP2Q9BUP3 242 aa20.36■□□□□ 0.85
SSH1-208ENST00000548522 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.36■□□□□ 0.85
SSH1-208ENST00000548522 SPP2Q13103 211 aa20.35■□□□□ 0.85
SSH1-208ENST00000548522 IRF5Q13568 498 aa20.35■□□□□ 0.85
SSH1-208ENST00000548522 SPATA5Q8NB90 893 aa20.35■□□□□ 0.85
SSH1-208ENST00000548522 OSBPL5Q9H0X9 879 aaPredicted RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms