RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 CETPP11597 493 aa19.83■□□□□ 0.77
RAPGEF3-217ENST00000548434 MCAMP43121 646 aa19.83■□□□□ 0.77
RAPGEF3-217ENST00000548434 NSUN4Q96CB9 384 aaKnown RBP19.83■□□□□ 0.77
RAPGEF3-217ENST00000548434 ERO1AQ96HE7 468 aa19.83■□□□□ 0.77
RAPGEF3-217ENST00000548434 MROH7-TTC4A0A0A0MT08 1334 aa19.82■□□□□ 0.76
RAPGEF3-217ENST00000548434 TLR2O60603 784 aa19.82■□□□□ 0.76
RAPGEF3-217ENST00000548434 SNAPC2Q13487 334 aa19.82■□□□□ 0.76
RAPGEF3-217ENST00000548434 TBC1D9Q6ZT07 1266 aa19.82■□□□□ 0.76
RAPGEF3-217ENST00000548434 SPATA5Q8NB90 893 aa19.82■□□□□ 0.76
RAPGEF3-217ENST00000548434 ABCF2Q9UG63 623 aa19.82■□□□□ 0.76
RAPGEF3-217ENST00000548434 ZBED9Q6R2W3 1325 aa19.81■□□□□ 0.76
RAPGEF3-217ENST00000548434 BTDP43251 543 aa19.81■□□□□ 0.76
RAPGEF3-217ENST00000548434 TAF1CQ15572 869 aaPredicted RBP19.81■□□□□ 0.76
RAPGEF3-217ENST00000548434 SPTY2D1Q68D10 685 aaPredicted RBP19.81■□□□□ 0.76
RAPGEF3-217ENST00000548434 C17orf99Q6UX52 265 aa19.81■□□□□ 0.76
RAPGEF3-217ENST00000548434 ARMC5Q96C12 935 aa19.81■□□□□ 0.76
RAPGEF3-217ENST00000548434 NEUROD6Q96NK8 337 aa19.81■□□□□ 0.76
RAPGEF3-217ENST00000548434 ZFYVE28Q9HCC9 887 aa19.81■□□□□ 0.76
RAPGEF3-217ENST00000548434 SIPA1L1O43166 1804 aa19.81■□□□□ 0.76
RAPGEF3-217ENST00000548434 CTGFP29279 349 aa19.8■□□□□ 0.76
RAPGEF3-217ENST00000548434 G3BP1Q13283 466 aaKnown RBP eCLIP19.8■□□□□ 0.76
RAPGEF3-217ENST00000548434 GPAT2Q6NUI2 795 aa19.8■□□□□ 0.76
RAPGEF3-217ENST00000548434 ERICH6Q7L0X2 663 aa19.8■□□□□ 0.76
RAPGEF3-217ENST00000548434 EFCC1Q9HA90 598 aa19.8■□□□□ 0.76
RAPGEF3-217ENST00000548434 DOCK1Q14185 1865 aa19.79■□□□□ 0.76
RAPGEF3-217ENST00000548434 FOCADQ5VW36 1801 aa19.79■□□□□ 0.76
RAPGEF3-217ENST00000548434 TNNI3KQ59H18 835 aa19.79■□□□□ 0.76
RAPGEF3-217ENST00000548434 ANKRD23Q86SG2 305 aa19.79■□□□□ 0.76
RAPGEF3-217ENST00000548434 DZIP1Q86YF9 867 aaKnown RBP19.79■□□□□ 0.76
RAPGEF3-217ENST00000548434 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.79■□□□□ 0.76
RAPGEF3-217ENST00000548434 ZNF512BQ96KM6 892 aaPredicted RBP19.79■□□□□ 0.76
RAPGEF3-217ENST00000548434 C1orf115Q9H7X2 142 aa19.79■□□□□ 0.76
RAPGEF3-217ENST00000548434 FPGT-TNNI3KV9GXZ4 949 aa19.79■□□□□ 0.76
RAPGEF3-217ENST00000548434 SLF2Q8IX21 1173 aa19.78■□□□□ 0.76
RAPGEF3-217ENST00000548434 DBNDD2Q9BQY9 259 aa19.78■□□□□ 0.76
RAPGEF3-217ENST00000548434 ARHGAP39Q9C0H5 1083 aa19.78■□□□□ 0.76
RAPGEF3-217ENST00000548434 AFG3L2Q9Y4W6 797 aa19.78■□□□□ 0.76
RAPGEF3-217ENST00000548434 COL2A1P02458 1487 aaPredicted RBP19.78■□□□□ 0.76
RAPGEF3-217ENST00000548434 POTEFA5A3E0 1075 aa19.77■□□□□ 0.76
RAPGEF3-217ENST00000548434 CXCL11O14625 94 aa19.77■□□□□ 0.76
RAPGEF3-217ENST00000548434 TBC1D12O60347 775 aa19.77■□□□□ 0.76
RAPGEF3-217ENST00000548434 MAP4K4O95819 1239 aaPredicted RBP19.77■□□□□ 0.76
RAPGEF3-217ENST00000548434 PTPRAP18433 802 aa19.77■□□□□ 0.76
RAPGEF3-217ENST00000548434 DOCK3Q8IZD9 2030 aa19.76■□□□□ 0.75
RAPGEF3-217ENST00000548434 CYP2E1P05181 493 aaPredicted RBP19.76■□□□□ 0.75
RAPGEF3-217ENST00000548434 UQCRFS1P1P0C7P4 283 aa19.76■□□□□ 0.75
RAPGEF3-217ENST00000548434 LACTBP83111 547 aaPredicted RBP19.76■□□□□ 0.75
RAPGEF3-217ENST00000548434 RRP1BQ14684 758 aaKnown RBP19.76■□□□□ 0.75
RAPGEF3-217ENST00000548434 SCYL3Q8IZE3 742 aa19.76■□□□□ 0.75
RAPGEF3-217ENST00000548434 MGAMO43451 1857 aa19.75■□□□□ 0.75
RAPGEF3-217ENST00000548434 MAST2Q6P0Q8 1798 aa19.75■□□□□ 0.75
RAPGEF3-217ENST00000548434 ATAD5Q96QE3 1844 aa19.75■□□□□ 0.75
RAPGEF3-217ENST00000548434 A0A0G2JLL6 359 aaPredicted RBP19.75■□□□□ 0.75
RAPGEF3-217ENST00000548434 PPP4CP60510 307 aa19.75■□□□□ 0.75
RAPGEF3-217ENST00000548434 CEP85Q6P2H3 762 aa19.75■□□□□ 0.75
RAPGEF3-217ENST00000548434 PRRT2Q7Z6L0 340 aaPredicted RBP19.75■□□□□ 0.75
RAPGEF3-217ENST00000548434 DBNLQ9UJU6 430 aaKnown RBP19.75■□□□□ 0.75
RAPGEF3-217ENST00000548434 PDHXO00330 501 aa19.74■□□□□ 0.75
RAPGEF3-217ENST00000548434 CTNND1O60716 968 aaKnown RBP19.74■□□□□ 0.75
RAPGEF3-217ENST00000548434 SURF6O75683 361 aaKnown RBP19.74■□□□□ 0.75
RAPGEF3-217ENST00000548434 ADGRA1Q86SQ6 560 aa19.74■□□□□ 0.75
RAPGEF3-217ENST00000548434 EAF2Q96CJ1 260 aaPredicted RBP19.74■□□□□ 0.75
RAPGEF3-217ENST00000548434 ZNF333Q96JL9 665 aa19.74■□□□□ 0.75
RAPGEF3-217ENST00000548434 TLR7Q9NYK1 1049 aaKnown RBP19.74■□□□□ 0.75
RAPGEF3-217ENST00000548434 PTCH2Q9Y6C5 1203 aa19.74■□□□□ 0.75
RAPGEF3-217ENST00000548434 LDHCP07864 332 aa19.73■□□□□ 0.75
RAPGEF3-217ENST00000548434 BCRP11274 1271 aa19.73■□□□□ 0.75
RAPGEF3-217ENST00000548434 METTL16Q86W50 562 aaKnown RBP19.73■□□□□ 0.75
RAPGEF3-217ENST00000548434 PANK1Q8TE04 598 aa19.73■□□□□ 0.75
RAPGEF3-217ENST00000548434 OSBPL5Q9H0X9 879 aaPredicted RBP19.73■□□□□ 0.75
RAPGEF3-217ENST00000548434 SNRKQ9NRH2 765 aa19.73■□□□□ 0.75
RAPGEF3-217ENST00000548434 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.73■□□□□ 0.75
RAPGEF3-217ENST00000548434 ZHX2Q9Y6X8 837 aa19.73■□□□□ 0.75
RAPGEF3-217ENST00000548434 GSTO1P78417 241 aa19.72■□□□□ 0.75
RAPGEF3-217ENST00000548434 PICALMQ13492 652 aa19.72■□□□□ 0.75
RAPGEF3-217ENST00000548434 GORABQ5T7V8 394 aa19.72■□□□□ 0.75
RAPGEF3-217ENST00000548434 ITPRIPQ8IWB1 547 aa19.72■□□□□ 0.75
RAPGEF3-217ENST00000548434 PIH1D3Q9NQM4 214 aaKnown RBP19.72■□□□□ 0.75
RAPGEF3-217ENST00000548434 SIRT2Q8IXJ6 389 aa19.71■□□□□ 0.75
RAPGEF3-217ENST00000548434 SH3RF3Q8TEJ3 882 aaPredicted RBP19.71■□□□□ 0.75
RAPGEF3-217ENST00000548434 TRIM47Q96LD4 638 aa19.71■□□□□ 0.75
RAPGEF3-217ENST00000548434 RAI14Q9P0K7 980 aa19.71■□□□□ 0.75
RAPGEF3-217ENST00000548434 CPA4Q9UI42 421 aa19.71■□□□□ 0.75
RAPGEF3-217ENST00000548434 LOC285556D6RIA3 1793 aa19.7■□□□□ 0.74
RAPGEF3-217ENST00000548434 FAM196BA6NMK8 535 aa19.7■□□□□ 0.74
RAPGEF3-217ENST00000548434 IGSF3O75054 1194 aa19.7■□□□□ 0.74
RAPGEF3-217ENST00000548434 ZAP70P43403 619 aa19.7■□□□□ 0.74
RAPGEF3-217ENST00000548434 CCDC84Q86UT8 332 aaPredicted RBP19.7■□□□□ 0.74
RAPGEF3-217ENST00000548434 FTSJ3Q8IY81 847 aaKnown RBP19.7■□□□□ 0.74
RAPGEF3-217ENST00000548434 SLC45A1Q9Y2W3 748 aa19.7■□□□□ 0.74
RAPGEF3-217ENST00000548434 SLC34A2O95436 690 aa19.69■□□□□ 0.74
RAPGEF3-217ENST00000548434 GNRH1P01148 92 aa19.69■□□□□ 0.74
RAPGEF3-217ENST00000548434 JAG1P78504 1218 aa19.69■□□□□ 0.74
RAPGEF3-217ENST00000548434 ZSCAN29Q8IWY8 852 aaPredicted RBP19.69■□□□□ 0.74
RAPGEF3-217ENST00000548434 CCDC8Q9H0W5 538 aaPredicted RBP19.69■□□□□ 0.74
RAPGEF3-217ENST00000548434 DNAJC18Q9H819 358 aa19.69■□□□□ 0.74
RAPGEF3-217ENST00000548434 LRP2BPQ9P2M1 347 aa19.69■□□□□ 0.74
RAPGEF3-217ENST00000548434 CYP2C8P10632 490 aa19.68■□□□□ 0.74
RAPGEF3-217ENST00000548434 EN2P19622 333 aaPredicted RBP19.68■□□□□ 0.74
RAPGEF3-217ENST00000548434 CCDC158Q5M9N0 1113 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms