RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 MAP3K9P80192 1104 aa22.75■■□□□ 1.23
PRPF40B-206ENST00000547764 MKRN3Q13064 507 aaKnown RBP22.75■■□□□ 1.23
PRPF40B-206ENST00000547764 ANKRD45Q5TZF3 282 aa22.75■■□□□ 1.23
PRPF40B-206ENST00000547764 TMED8Q6PL24 325 aaPredicted RBP22.75■■□□□ 1.23
PRPF40B-206ENST00000547764 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.75■■□□□ 1.23
PRPF40B-206ENST00000547764 ZSCAN29Q8IWY8 852 aaPredicted RBP22.75■■□□□ 1.23
PRPF40B-206ENST00000547764 GPATCH3Q96I76 525 aa22.75■■□□□ 1.23
PRPF40B-206ENST00000547764 RWDD1Q9H446 243 aaPredicted RBP22.75■■□□□ 1.23
PRPF40B-206ENST00000547764 DDTLA6NHG4 134 aaPredicted RBP22.74■■□□□ 1.23
PRPF40B-206ENST00000547764 DYNLL1P63167 89 aaKnown RBP22.74■■□□□ 1.23
PRPF40B-206ENST00000547764 SLC9C2Q5TAH2 1124 aa22.74■■□□□ 1.23
PRPF40B-206ENST00000547764 SPRYD7Q5W111 196 aa22.74■■□□□ 1.23
PRPF40B-206ENST00000547764 TSHZ3Q63HK5 1081 aa22.74■■□□□ 1.23
PRPF40B-206ENST00000547764 CSRNP1Q96S65 589 aa22.74■■□□□ 1.23
PRPF40B-206ENST00000547764 BEGAINQ9BUH8 593 aa22.74■■□□□ 1.23
PRPF40B-206ENST00000547764 ZNF341Q9BYN7 854 aa22.74■■□□□ 1.23
PRPF40B-206ENST00000547764 PDE6AP16499 860 aa22.73■■□□□ 1.23
PRPF40B-206ENST00000547764 MIGA1Q8NAN2 632 aa22.73■■□□□ 1.23
PRPF40B-206ENST00000547764 OTUD7AQ8TE49 926 aaPredicted RBP22.73■■□□□ 1.23
PRPF40B-206ENST00000547764 WRNIP1Q96S55 665 aa22.73■■□□□ 1.23
PRPF40B-206ENST00000547764 OTOFQ9HC10 1997 aa22.72■■□□□ 1.23
PRPF40B-206ENST00000547764 IGHDP01880 384 aa22.72■■□□□ 1.23
PRPF40B-206ENST00000547764 VGLL4Q14135 290 aa22.72■■□□□ 1.23
PRPF40B-206ENST00000547764 WNK4Q96J92 1243 aa22.72■■□□□ 1.23
PRPF40B-206ENST00000547764 OSBPL5Q9H0X9 879 aaPredicted RBP22.72■■□□□ 1.23
PRPF40B-206ENST00000547764 ELP3Q9H9T3 547 aa22.72■■□□□ 1.23
PRPF40B-206ENST00000547764 ZBTB47Q9UFB7 747 aaPredicted RBP22.72■■□□□ 1.23
PRPF40B-206ENST00000547764 ATRNL1Q5VV63 1379 aa22.72■■□□□ 1.23
PRPF40B-206ENST00000547764 REM2Q8IYK8 340 aaPredicted RBP22.71■■□□□ 1.23
PRPF40B-206ENST00000547764 TGFBRAP1Q8WUH2 860 aa22.71■■□□□ 1.23
PRPF40B-206ENST00000547764 CSADQ9Y600 493 aa22.71■■□□□ 1.23
PRPF40B-206ENST00000547764 TCRBV5S4A2TA0A5A2 114 aa22.7■■□□□ 1.22
PRPF40B-206ENST00000547764 ZBTB48P10074 688 aaPredicted RBP22.7■■□□□ 1.22
PRPF40B-206ENST00000547764 GJA5P36382 358 aa22.7■■□□□ 1.22
PRPF40B-206ENST00000547764 CTCFP49711 727 aaPredicted RBP22.7■■□□□ 1.22
PRPF40B-206ENST00000547764 CERS3Q8IU89 383 aa22.7■■□□□ 1.22
PRPF40B-206ENST00000547764 SMC5Q8IY18 1101 aa22.7■■□□□ 1.22
PRPF40B-206ENST00000547764 ZKSCAN4Q969J2 545 aaPredicted RBP22.7■■□□□ 1.22
PRPF40B-206ENST00000547764 ZNF112Q9UJU3 913 aa22.7■■□□□ 1.22
PRPF40B-206ENST00000547764 TTC41PQ6P2S7 1318 aa22.7■■□□□ 1.22
PRPF40B-206ENST00000547764 ZNF532Q9HCE3 1301 aa22.7■■□□□ 1.22
PRPF40B-206ENST00000547764 SLURP2P0DP57 97 aa22.69■■□□□ 1.22
PRPF40B-206ENST00000547764 INPP5BP32019 993 aa22.69■■□□□ 1.22
PRPF40B-206ENST00000547764 MAP3K10Q02779 954 aa22.69■■□□□ 1.22
PRPF40B-206ENST00000547764 MAPKAPK5Q8IW41 473 aa22.69■■□□□ 1.22
PRPF40B-206ENST00000547764 OPTNQ96CV9 577 aa22.69■■□□□ 1.22
PRPF40B-206ENST00000547764 SNCAIPQ9Y6H5 919 aa22.69■■□□□ 1.22
PRPF40B-206ENST00000547764 COL2A1P02458 1487 aaPredicted RBP22.68■■□□□ 1.22
PRPF40B-206ENST00000547764 FLT1P17948 1338 aa22.68■■□□□ 1.22
PRPF40B-206ENST00000547764 SALL3Q9BXA9 1300 aa22.68■■□□□ 1.22
PRPF40B-206ENST00000547764 CA12O43570 354 aa22.68■■□□□ 1.22
PRPF40B-206ENST00000547764 MX1P20591 662 aa22.68■■□□□ 1.22
PRPF40B-206ENST00000547764 ADD2P35612 726 aa22.68■■□□□ 1.22
PRPF40B-206ENST00000547764 SLFNL1Q499Z3 407 aa22.68■■□□□ 1.22
PRPF40B-206ENST00000547764 PI4K2BQ8TCG2 481 aa22.68■■□□□ 1.22
PRPF40B-206ENST00000547764 CNKSR2Q8WXI2 1034 aa22.68■■□□□ 1.22
PRPF40B-206ENST00000547764 RIOK1Q9BRS2 568 aaKnown RBP22.68■■□□□ 1.22
PRPF40B-206ENST00000547764 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.68■■□□□ 1.22
PRPF40B-206ENST00000547764 MAGEB6P1A0A0J9YX57 407 aa22.67■■□□□ 1.22
PRPF40B-206ENST00000547764 ERC2O15083 957 aa22.67■■□□□ 1.22
PRPF40B-206ENST00000547764 HSPA8P11142 646 aaKnown RBP22.67■■□□□ 1.22
PRPF40B-206ENST00000547764 TM4SF4P48230 202 aa22.67■■□□□ 1.22
PRPF40B-206ENST00000547764 B4GALNT3Q6L9W6 998 aa22.67■■□□□ 1.22
PRPF40B-206ENST00000547764 RNF186Q9NXI6 227 aa22.67■■□□□ 1.22
PRPF40B-206ENST00000547764 TSKSQ9UJT2 592 aa22.67■■□□□ 1.22
PRPF40B-206ENST00000547764 CDK5RAP2Q96SN8 1893 aa22.66■■□□□ 1.22
PRPF40B-206ENST00000547764 PHF20L1A8MW92 1017 aa22.66■■□□□ 1.22
PRPF40B-206ENST00000547764 CHGBP05060 677 aa22.66■■□□□ 1.22
PRPF40B-206ENST00000547764 LBX1P52954 281 aa22.66■■□□□ 1.22
PRPF40B-206ENST00000547764 SREBF2Q12772 1141 aa22.66■■□□□ 1.22
PRPF40B-206ENST00000547764 MANSC4A6NHS7 340 aaPredicted RBP22.65■■□□□ 1.22
PRPF40B-206ENST00000547764 SPDYE5A6NIY4 337 aa22.65■■□□□ 1.22
PRPF40B-206ENST00000547764 TBC1D12O60347 775 aa22.65■■□□□ 1.22
PRPF40B-206ENST00000547764 GLRX3O76003 335 aaKnown RBP22.65■■□□□ 1.22
PRPF40B-206ENST00000547764 USP5P45974 858 aa22.65■■□□□ 1.22
PRPF40B-206ENST00000547764 UBE3CQ15386 1083 aa22.65■■□□□ 1.22
PRPF40B-206ENST00000547764 ERO1BQ86YB8 467 aa22.65■■□□□ 1.22
PRPF40B-206ENST00000547764 OTUD5Q96G74 571 aa22.65■■□□□ 1.22
PRPF40B-206ENST00000547764 LNPKQ9C0E8 428 aa22.65■■□□□ 1.22
PRPF40B-206ENST00000547764 DHX36Q9H2U1 1008 aaKnown RBP22.65■■□□□ 1.22
PRPF40B-206ENST00000547764 PALD1Q9ULE6 856 aa22.65■■□□□ 1.22
PRPF40B-206ENST00000547764 FOCADQ5VW36 1801 aa22.64■■□□□ 1.22
PRPF40B-206ENST00000547764 TRPA1O75762 1119 aa22.64■■□□□ 1.21
PRPF40B-206ENST00000547764 NOL9Q5SY16 702 aaKnown RBP22.64■■□□□ 1.21
PRPF40B-206ENST00000547764 ZSCAN25Q6NSZ9 544 aa22.64■■□□□ 1.21
PRPF40B-206ENST00000547764 KBTBD3Q8NAB2 608 aa22.64■■□□□ 1.21
PRPF40B-206ENST00000547764 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.64■■□□□ 1.215e-6■■■□□ 17
PRPF40B-206ENST00000547764 SAGE1Q9NXZ1 904 aa22.64■■□□□ 1.21
PRPF40B-206ENST00000547764 PI4KBQ9UBF8 816 aa22.64■■□□□ 1.21
PRPF40B-206ENST00000547764 SAP30BPQ9UHR5 308 aaKnown RBP22.64■■□□□ 1.21
PRPF40B-206ENST00000547764 FAM196BA6NMK8 535 aa22.63■■□□□ 1.21
PRPF40B-206ENST00000547764 INHBEP58166 350 aa22.63■■□□□ 1.21
PRPF40B-206ENST00000547764 LCORLQ8N3X6 602 aa22.63■■□□□ 1.21
PRPF40B-206ENST00000547764 STAP2Q9UGK3 403 aa22.63■■□□□ 1.21
PRPF40B-206ENST00000547764 PDE1AP54750 535 aa22.62■■□□□ 1.21
PRPF40B-206ENST00000547764 NUCB1Q02818 461 aa22.62■■□□□ 1.21
PRPF40B-206ENST00000547764 CHD1LQ86WJ1 897 aa22.62■■□□□ 1.21
PRPF40B-206ENST00000547764 MS4A4AQ96JQ5 239 aa22.62■■□□□ 1.21
PRPF40B-206ENST00000547764 CRNKL1Q9BZJ0 848 aaKnown RBP22.62■■□□□ 1.21
PRPF40B-206ENST00000547764 ARMT1Q9H993 441 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms