RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 ABCF2Q9UG63 623 aa20.68■□□□□ 0.9
RBFOX1-207ENST00000547338 MYO5AQ9Y4I1 1855 aaKnown RBP20.68■□□□□ 0.9
RBFOX1-207ENST00000547338 LBX1P52954 281 aa20.68■□□□□ 0.9
RBFOX1-207ENST00000547338 MECOMQ03112 1051 aa20.68■□□□□ 0.9
RBFOX1-207ENST00000547338 SUPT20HL1Q3ZLR7 823 aa20.68■□□□□ 0.9
RBFOX1-207ENST00000547338 ZGPATQ8N5A5 531 aaKnown RBP20.68■□□□□ 0.9
RBFOX1-207ENST00000547338 CSRNP1Q96S65 589 aa20.68■□□□□ 0.9
RBFOX1-207ENST00000547338 CCDC8Q9H0W5 538 aaPredicted RBP20.68■□□□□ 0.9
RBFOX1-207ENST00000547338 TSKSQ9UJT2 592 aa20.68■□□□□ 0.9
RBFOX1-207ENST00000547338 DDX11L8A8MPP1 907 aa20.67■□□□□ 0.9
RBFOX1-207ENST00000547338 UQCRFS1P1P0C7P4 283 aa20.67■□□□□ 0.9
RBFOX1-207ENST00000547338 MCM4P33991 863 aa20.67■□□□□ 0.9
RBFOX1-207ENST00000547338 FAM83AQ86UY5 434 aa20.67■□□□□ 0.9
RBFOX1-207ENST00000547338 FAM163AQ96GL9 167 aaPredicted RBP20.67■□□□□ 0.9
RBFOX1-207ENST00000547338 ZNF512BQ96KM6 892 aaPredicted RBP20.67■□□□□ 0.9
RBFOX1-207ENST00000547338 SNRKQ9NRH2 765 aa20.67■□□□□ 0.9
RBFOX1-207ENST00000547338 FAM198AQ9UFP1 575 aa20.67■□□□□ 0.9
RBFOX1-207ENST00000547338 LAMB1P07942 1786 aa20.67■□□□□ 0.9
RBFOX1-207ENST00000547338 RPAP1Q9BWH6 1393 aaPredicted RBP20.66■□□□□ 0.9
RBFOX1-207ENST00000547338 PI4K2BQ8TCG2 481 aa20.66■□□□□ 0.9
RBFOX1-207ENST00000547338 TNNI2P48788 182 aa20.65■□□□□ 0.9
RBFOX1-207ENST00000547338 ZFPM1Q8IX07 1006 aa20.65■□□□□ 0.9
RBFOX1-207ENST00000547338 RILPL2Q969X0 211 aa20.65■□□□□ 0.9
RBFOX1-207ENST00000547338 NSUN4Q96CB9 384 aaKnown RBP20.65■□□□□ 0.9
RBFOX1-207ENST00000547338 IL1RAPL2Q9NP60 686 aa20.65■□□□□ 0.9
RBFOX1-207ENST00000547338 PRDM10Q9NQV6 1147 aa20.65■□□□□ 0.9
RBFOX1-207ENST00000547338 MAST2Q6P0Q8 1798 aa20.65■□□□□ 0.9
RBFOX1-207ENST00000547338 MROH7-TTC4A0A0A0MT08 1334 aa20.64■□□□□ 0.9
RBFOX1-207ENST00000547338 PPP1R12BO60237 982 aaPredicted RBP20.64■□□□□ 0.9
RBFOX1-207ENST00000547338 CYP2E1P05181 493 aaPredicted RBP20.64■□□□□ 0.9
RBFOX1-207ENST00000547338 TTC39AQ5SRH9 613 aa20.64■□□□□ 0.9
RBFOX1-207ENST00000547338 SPTY2D1Q68D10 685 aaPredicted RBP20.64■□□□□ 0.9
RBFOX1-207ENST00000547338 DZIP1Q86YF9 867 aaKnown RBP20.64■□□□□ 0.9
RBFOX1-207ENST00000547338 RUFY2Q8WXA3 655 aa20.64■□□□□ 0.9
RBFOX1-207ENST00000547338 GBP4Q96PP9 640 aa20.64■□□□□ 0.9
RBFOX1-207ENST00000547338 USP40Q9NVE5 1235 aa20.64■□□□□ 0.9
RBFOX1-207ENST00000547338 GJA5P36382 358 aa20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 RAB3GAP1Q15042 981 aa20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 CCDC158Q5M9N0 1113 aa20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 SPRYD7Q5W111 196 aa20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 CLEC17AQ6ZS10 378 aa20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 AACSQ86V21 672 aa20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 ECHDC1Q9NTX5 307 aa20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 TMOD2Q9NZR1 351 aa20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 HIP1O00291 1037 aa20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 WDHD1O75717 1129 aaPredicted RBP20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 ZAP70P43403 619 aa20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 RHBDL3P58872 404 aa20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 NUCB2P80303 420 aa20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 MKRN3Q13064 507 aaKnown RBP20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 FAM151AQ8WW52 585 aa20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 PIH1D3Q9NQM4 214 aaKnown RBP20.63■□□□□ 0.89
RBFOX1-207ENST00000547338 ATRNL1Q5VV63 1379 aa20.62■□□□□ 0.89
RBFOX1-207ENST00000547338 GPR75-ASB3A0A0A6YYF3 556 aa20.62■□□□□ 0.89
RBFOX1-207ENST00000547338 IFIT2P09913 472 aaKnown RBP20.62■□□□□ 0.89
RBFOX1-207ENST00000547338 BTDP43251 543 aa20.62■□□□□ 0.89
RBFOX1-207ENST00000547338 TCP10Q12799 353 aa20.62■□□□□ 0.89
RBFOX1-207ENST00000547338 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.62■□□□□ 0.89
RBFOX1-207ENST00000547338 BEGAINQ9BUH8 593 aa20.62■□□□□ 0.89
RBFOX1-207ENST00000547338 BCL11AQ9H165 835 aa20.62■□□□□ 0.89
RBFOX1-207ENST00000547338 DDX4Q9NQI0 724 aaKnown RBP20.62■□□□□ 0.89
RBFOX1-207ENST00000547338 RNF186Q9NXI6 227 aa20.62■□□□□ 0.89
RBFOX1-207ENST00000547338 NDUFB9Q9Y6M9 179 aa20.62■□□□□ 0.89
RBFOX1-207ENST00000547338 UNCXA6NJT0 531 aa20.61■□□□□ 0.89
RBFOX1-207ENST00000547338 IREB2P48200 963 aaKnown RBP20.61■□□□□ 0.89
RBFOX1-207ENST00000547338 SH3BP5LQ7L8J4 393 aa20.61■□□□□ 0.89
RBFOX1-207ENST00000547338 TICAM2Q86XR7 235 aa20.61■□□□□ 0.89
RBFOX1-207ENST00000547338 SPRYD3Q8NCJ5 442 aa20.61■□□□□ 0.89
RBFOX1-207ENST00000547338 WNK4Q96J92 1243 aa20.61■□□□□ 0.89
RBFOX1-207ENST00000547338 IDI2Q9BXS1 227 aa20.61■□□□□ 0.89
RBFOX1-207ENST00000547338 DOCK2Q92608 1830 aa20.61■□□□□ 0.89
RBFOX1-207ENST00000547338 CA12O43570 354 aa20.6■□□□□ 0.89
RBFOX1-207ENST00000547338 SKOR2Q2VWA4 1001 aaPredicted RBP20.6■□□□□ 0.89
RBFOX1-207ENST00000547338 ADGRA1Q86SQ6 560 aa20.6■□□□□ 0.89
RBFOX1-207ENST00000547338 SLC10A4Q96EP9 437 aa20.6■□□□□ 0.89
RBFOX1-207ENST00000547338 RAI14Q9P0K7 980 aa20.6■□□□□ 0.89
RBFOX1-207ENST00000547338 VGLL4Q14135 290 aa20.59■□□□□ 0.89
RBFOX1-207ENST00000547338 ANKRD13AQ8IZ07 590 aa20.59■□□□□ 0.89
RBFOX1-207ENST00000547338 CNKSR2Q8WXI2 1034 aa20.59■□□□□ 0.89
RBFOX1-207ENST00000547338 EVI5LQ96CN4 794 aa20.59■□□□□ 0.89
RBFOX1-207ENST00000547338 SAGE1Q9NXZ1 904 aa20.59■□□□□ 0.89
RBFOX1-207ENST00000547338 SGSM2O43147 1006 aa20.58■□□□□ 0.89
RBFOX1-207ENST00000547338 TM4SF4P48230 202 aa20.58■□□□□ 0.89
RBFOX1-207ENST00000547338 ELP3Q9H9T3 547 aa20.58■□□□□ 0.89
RBFOX1-207ENST00000547338 LRP2BPQ9P2M1 347 aa20.58■□□□□ 0.89
RBFOX1-207ENST00000547338 CASP8AP2Q9UKL3 1982 aa20.58■□□□□ 0.89
RBFOX1-207ENST00000547338 TRPA1O75762 1119 aa20.58■□□□□ 0.88
RBFOX1-207ENST00000547338 CD2BP2O95400 341 aaKnown RBP20.58■□□□□ 0.88
RBFOX1-207ENST00000547338 SLURP2P0DP57 97 aa20.58■□□□□ 0.88
RBFOX1-207ENST00000547338 KIAA1211Q6ZU35 1233 aa20.58■□□□□ 0.88
RBFOX1-207ENST00000547338 MIGA2Q7L4E1 593 aa20.58■□□□□ 0.88
RBFOX1-207ENST00000547338 SLF2Q8IX21 1173 aa20.58■□□□□ 0.88
RBFOX1-207ENST00000547338 ANO2Q9NQ90 1003 aa20.58■□□□□ 0.88
RBFOX1-207ENST00000547338 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.58■□□□□ 0.88
RBFOX1-207ENST00000547338 CDK5RAP2Q96SN8 1893 aa20.57■□□□□ 0.88
RBFOX1-207ENST00000547338 ENTPD3O75355 529 aa20.57■□□□□ 0.88
RBFOX1-207ENST00000547338 ZBTB48P10074 688 aaPredicted RBP20.57■□□□□ 0.88
RBFOX1-207ENST00000547338 HSPA4P34932 840 aa20.57■□□□□ 0.88
RBFOX1-207ENST00000547338 REM2Q8IYK8 340 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms