RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	ZNF16	P17020	682 aa	Predicted RBP	7.79	□□□□□ -1.16
LGR5-204	ENST00000547310	CFP	P27918	469 aa		7.79	□□□□□ -1.16
LGR5-204	ENST00000547310	PSMD2	Q13200	908 aa		7.79	□□□□□ -1.16
LGR5-204	ENST00000547310	AP3B2	Q13367	1082 aa		7.79	□□□□□ -1.16
LGR5-204	ENST00000547310	ZNF792	Q3KQV3	632 aa		7.79	□□□□□ -1.16
LGR5-204	ENST00000547310	SGO2	Q562F6	1265 aa		7.79	□□□□□ -1.16
LGR5-204	ENST00000547310	SHISA5	Q8N114	240 aa		7.79	□□□□□ -1.16
LGR5-204	ENST00000547310	RGS22	Q8NE09	1264 aa		7.79	□□□□□ -1.16
LGR5-204	ENST00000547310	GIPC2	Q8TF65	315 aa		7.79	□□□□□ -1.16
LGR5-204	ENST00000547310	FAM168A	Q92567	244 aa		7.79	□□□□□ -1.16
LGR5-204	ENST00000547310	TRIM56	Q9BRZ2	755 aa	Known RBP	7.79	□□□□□ -1.16
LGR5-204	ENST00000547310	CEP44	Q9C0F1	390 aa		7.79	□□□□□ -1.16
LGR5-204	ENST00000547310	TMEM39A	Q9NV64	488 aa		7.79	□□□□□ -1.16
LGR5-204	ENST00000547310	GSTM4	Q03013	218 aa		7.78	□□□□□ -1.16
LGR5-204	ENST00000547310	PPP2R3A	Q06190	1150 aa		7.78	□□□□□ -1.16
LGR5-204	ENST00000547310	TTLL10	Q6ZVT0	673 aa		7.78	□□□□□ -1.16
LGR5-204	ENST00000547310	C1QL4	Q86Z23	238 aa		7.78	□□□□□ -1.16
LGR5-204	ENST00000547310	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	7.78	□□□□□ -1.16
LGR5-204	ENST00000547310	NECAB3	Q96P71	396 aa	Predicted RBP	7.78	□□□□□ -1.16
LGR5-204	ENST00000547310	AKAP2	Q9Y2D5	859 aa		7.78	□□□□□ -1.16
LGR5-204	ENST00000547310	LOC100289279	A0A1B0GTE1	492 aa		7.77	□□□□□ -1.17
LGR5-204	ENST00000547310	FAM95C	A0A1B0GW59	222 aa		7.77	□□□□□ -1.17
LGR5-204	ENST00000547310	SORBS3	O60504	671 aa		7.77	□□□□□ -1.17
LGR5-204	ENST00000547310	NLRP12	P59046	1061 aa		7.77	□□□□□ -1.17
LGR5-204	ENST00000547310	LCNL1	Q6ZST4	164 aa		7.77	□□□□□ -1.17
LGR5-204	ENST00000547310	SYNGAP1	Q96PV0	1343 aa		7.77	□□□□□ -1.17
LGR5-204	ENST00000547310	USP31	Q70CQ4	1352 aa		7.76	□□□□□ -1.17
LGR5-204	ENST00000547310	ST13	P50502	369 aa	Known RBP	7.76	□□□□□ -1.17
LGR5-204	ENST00000547310	MRPL58	Q14197	206 aa	Known RBP	7.76	□□□□□ -1.17
LGR5-204	ENST00000547310	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	7.76	□□□□□ -1.17
LGR5-204	ENST00000547310	PAOX	Q6QHF9	649 aa		7.76	□□□□□ -1.17
LGR5-204	ENST00000547310	SV2B	Q7L1I2	683 aa		7.76	□□□□□ -1.17
LGR5-204	ENST00000547310	RUSC1	Q9BVN2	902 aa		7.76	□□□□□ -1.17
LGR5-204	ENST00000547310	TMPRSS13	Q9BYE2	586 aa		7.76	□□□□□ -1.17
LGR5-204	ENST00000547310	BCL11A	Q9H165	835 aa		7.76	□□□□□ -1.17
LGR5-204	ENST00000547310	SUGCT	Q9HAC7	445 aa		7.76	□□□□□ -1.17
LGR5-204	ENST00000547310	SLC5A6	Q9Y289	635 aa		7.76	□□□□□ -1.17
LGR5-204	ENST00000547310	CTSH	P09668	335 aa		7.75	□□□□□ -1.17
LGR5-204	ENST00000547310	RXRB	P28702	533 aa		7.75	□□□□□ -1.17
LGR5-204	ENST00000547310	PLCL1	Q15111	1095 aa		7.75	□□□□□ -1.17
LGR5-204	ENST00000547310	POU4F3	Q15319	338 aa		7.75	□□□□□ -1.17
LGR5-204	ENST00000547310	EXOSC6	Q5RKV6	272 aa	Known RBP	7.75	□□□□□ -1.17
LGR5-204	ENST00000547310	SCARA3	Q6AZY7	606 aa		7.75	□□□□□ -1.17
LGR5-204	ENST00000547310	ZAR1	Q86SH2	424 aa		7.75	□□□□□ -1.17
LGR5-204	ENST00000547310	BCL7C	Q8WUZ0	217 aa	Predicted RBP	7.75	□□□□□ -1.17
LGR5-204	ENST00000547310	CRELD1	Q96HD1	420 aa		7.75	□□□□□ -1.17
LGR5-204	ENST00000547310	ZC3H7B	Q9UGR2	993 aa	Known RBP	7.75	□□□□□ -1.17
LGR5-204	ENST00000547310	ENC1	O14682	589 aa		7.74	□□□□□ -1.17
LGR5-204	ENST00000547310	DLGAP3	O95886	979 aa		7.74	□□□□□ -1.17
LGR5-204	ENST00000547310	NME2	P22392	152 aa		7.74	□□□□□ -1.17
LGR5-204	ENST00000547310	MAOB	P27338	520 aa		7.74	□□□□□ -1.17
LGR5-204	ENST00000547310	NFKBIB	Q15653	356 aa		7.74	□□□□□ -1.17
LGR5-204	ENST00000547310	PDZD3	Q86UT5	571 aa		7.74	□□□□□ -1.17
LGR5-204	ENST00000547310	SMG8	Q8ND04	991 aa	Known RBP	7.74	□□□□□ -1.17
LGR5-204	ENST00000547310	FAM161B	Q96MY7	647 aa		7.74	□□□□□ -1.17
LGR5-204	ENST00000547310	GPN3	Q9UHW5	284 aa	Predicted RBP	7.74	□□□□□ -1.17
LGR5-204	ENST00000547310	ADM	P35318	185 aa		7.73	□□□□□ -1.17
LGR5-204	ENST00000547310	RAP1GAP	P47736	663 aa		7.73	□□□□□ -1.17
LGR5-204	ENST00000547310	WFDC3	Q8IUB2	231 aa		7.73	□□□□□ -1.17
LGR5-204	ENST00000547310	STK11IP	Q8N1F8	1099 aa		7.73	□□□□□ -1.17
LGR5-204	ENST00000547310	CORO1B	Q9BR76	489 aa		7.73	□□□□□ -1.17
LGR5-204	ENST00000547310	NOC4L	Q9BVI4	516 aa	Known RBP	7.73	□□□□□ -1.17
LGR5-204	ENST00000547310	USP26	Q9BXU7	913 aa		7.73	□□□□□ -1.17
LGR5-204	ENST00000547310	MRS2	Q9HD23	443 aa		7.73	□□□□□ -1.17
LGR5-204	ENST00000547310	KRT82	Q9NSB4	513 aa		7.73	□□□□□ -1.17
LGR5-204	ENST00000547310	CACNA2D2	Q9NY47	1150 aa		7.73	□□□□□ -1.17
LGR5-204	ENST00000547310	SAMM50	Q9Y512	469 aa		7.73	□□□□□ -1.17
LGR5-204	ENST00000547310	GSTP1	P09211	210 aa	Known RBP	7.72	□□□□□ -1.17
LGR5-204	ENST00000547310	VAMP1	P23763	118 aa		7.72	□□□□□ -1.17
LGR5-204	ENST00000547310	ARNT	P27540	789 aa		7.72	□□□□□ -1.17
LGR5-204	ENST00000547310	ZNF252P-AS1	Q0IIN9	211 aa		7.72	□□□□□ -1.17
LGR5-204	ENST00000547310	TAF1C	Q15572	869 aa	Predicted RBP	7.72	□□□□□ -1.17
LGR5-204	ENST00000547310	TPTE2	Q6XPS3	522 aa		7.72	□□□□□ -1.17
LGR5-204	ENST00000547310	SULF2	Q8IWU5	870 aa		7.72	□□□□□ -1.17
LGR5-204	ENST00000547310	EMILIN2	Q9BXX0	1053 aa		7.72	□□□□□ -1.17
LGR5-204	ENST00000547310	TIAF1	O95411	115 aa		7.71	□□□□□ -1.18
LGR5-204	ENST00000547310	CTSB	P07858	339 aa		7.71	□□□□□ -1.18
LGR5-204	ENST00000547310	BMP6	P22004	513 aa		7.71	□□□□□ -1.18
LGR5-204	ENST00000547310	ZNF157	P51786	506 aa	Predicted RBP	7.71	□□□□□ -1.18
LGR5-204	ENST00000547310	DUSP27	Q5VZP5	1158 aa		7.71	□□□□□ -1.18
LGR5-204	ENST00000547310	GATA6	Q92908	595 aa		7.71	□□□□□ -1.18
LGR5-204	ENST00000547310	TBC1D32	Q96NH3	1257 aa		7.71	□□□□□ -1.18
LGR5-204	ENST00000547310	CYP4F12	Q9HCS2	524 aa		7.71	□□□□□ -1.18
LGR5-204	ENST00000547310	VTI1B	Q9UEU0	232 aa		7.71	□□□□□ -1.18
LGR5-204	ENST00000547310	PRKAG2	Q9UGJ0	569 aa		7.71	□□□□□ -1.18
LGR5-204	ENST00000547310	TTF2	Q9UNY4	1162 aa	Known RBP	7.71	□□□□□ -1.18
LGR5-204	ENST00000547310	ECEL1	O95672	775 aa		7.7	□□□□□ -1.18
LGR5-204	ENST00000547310	TSPAN15	O95858	294 aa		7.7	□□□□□ -1.18
LGR5-204	ENST00000547310	RLBP1	P12271	317 aa		7.7	□□□□□ -1.18
LGR5-204	ENST00000547310	NUTM2G	Q5VZR2	741 aa		7.7	□□□□□ -1.18
LGR5-204	ENST00000547310	LRRC56	Q8IYG6	542 aa	Predicted RBP	7.7	□□□□□ -1.18
LGR5-204	ENST00000547310	STK35	Q8TDR2	534 aa		7.7	□□□□□ -1.18
LGR5-204	ENST00000547310	EZH1	Q92800	747 aa	Predicted RBP	7.7	□□□□□ -1.18
LGR5-204	ENST00000547310	PODXL2	Q9NZ53	605 aa		7.7	□□□□□ -1.18
LGR5-204	ENST00000547310	CYP8B1	Q9UNU6	501 aa		7.7	□□□□□ -1.18
LGR5-204	ENST00000547310	FBXO24	O75426	580 aa		7.69	□□□□□ -1.18
LGR5-204	ENST00000547310	PAGE1	O75459	146 aa		7.69	□□□□□ -1.18
LGR5-204	ENST00000547310	ZSCAN22	P10073	491 aa	Predicted RBP	7.69	□□□□□ -1.18
LGR5-204	ENST00000547310	RPS26	P62854	115 aa	Known RBP	7.69	□□□□□ -1.18
LGR5-204	ENST00000547310	HNRNPU	Q00839	825 aa	Known RBP eCLIP	7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms