RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 SPRYD7Q5W111 196 aa13.3□□□□□ -0.28
GCN1-202ENST00000547263 EDC3Q96F86 508 aaKnown RBP13.3□□□□□ -0.28
GCN1-202ENST00000547263 CLMNQ96JQ2 1002 aa13.3□□□□□ -0.28
GCN1-202ENST00000547263 OSBPL5Q9H0X9 879 aaPredicted RBP13.3□□□□□ -0.28
GCN1-202ENST00000547263 PAG1Q9NWQ8 432 aa13.3□□□□□ -0.28
GCN1-202ENST00000547263 STAP2Q9UGK3 403 aa13.3□□□□□ -0.28
GCN1-202ENST00000547263 MYH1P12882 1939 aa13.3□□□□□ -0.28
GCN1-202ENST00000547263 PCNTO95613 3336 aa13.3□□□□□ -0.28
GCN1-202ENST00000547263 DOCK1Q14185 1865 aa13.29□□□□□ -0.28
GCN1-202ENST00000547263 PHF20L1A8MW92 1017 aa13.29□□□□□ -0.28
GCN1-202ENST00000547263 GOLIM4O00461 696 aa13.29□□□□□ -0.28
GCN1-202ENST00000547263 FOXN1O15353 648 aa13.29□□□□□ -0.28
GCN1-202ENST00000547263 IDH1O75874 414 aaKnown RBP13.29□□□□□ -0.28
GCN1-202ENST00000547263 BAG3O95817 575 aa13.29□□□□□ -0.28
GCN1-202ENST00000547263 CYP7A1P22680 504 aa13.29□□□□□ -0.28
GCN1-202ENST00000547263 ADD2P35612 726 aa13.29□□□□□ -0.28
GCN1-202ENST00000547263 GJA5P36382 358 aa13.29□□□□□ -0.28
GCN1-202ENST00000547263 MAP3K9P80192 1104 aa13.29□□□□□ -0.28
GCN1-202ENST00000547263 KIF23Q02241 960 aaPredicted RBP13.29□□□□□ -0.28
GCN1-202ENST00000547263 TCP10Q12799 353 aa13.29□□□□□ -0.28
GCN1-202ENST00000547263 NOL9Q5SY16 702 aaKnown RBP13.29□□□□□ -0.28
GCN1-202ENST00000547263 DCAF15Q66K64 600 aa13.29□□□□□ -0.28
GCN1-202ENST00000547263 MAGEB6Q8N7X4 407 aa13.29□□□□□ -0.28
GCN1-202ENST00000547263 OTUD7AQ8TE49 926 aaPredicted RBP13.29□□□□□ -0.28
GCN1-202ENST00000547263 SH3RF3Q8TEJ3 882 aaPredicted RBP13.29□□□□□ -0.28
GCN1-202ENST00000547263 WNK4Q96J92 1243 aa13.29□□□□□ -0.28
GCN1-202ENST00000547263 CSRNP1Q96S65 589 aa13.29□□□□□ -0.28
GCN1-202ENST00000547263 AATFQ9NY61 560 aaKnown RBP eCLIP13.29□□□□□ -0.28
GCN1-202ENST00000547263 SNCAIPQ9Y6H5 919 aa13.29□□□□□ -0.28
GCN1-202ENST00000547263 NAV1Q8NEY1 1877 aa13.28□□□□□ -0.28
GCN1-202ENST00000547263 TESPA1A2RU30 521 aaPredicted RBP13.28□□□□□ -0.28
GCN1-202ENST00000547263 SPDYE5A6NIY4 337 aa13.28□□□□□ -0.28
GCN1-202ENST00000547263 CA12O43570 354 aa13.28□□□□□ -0.28
GCN1-202ENST00000547263 PRKG1Q13976 671 aa13.28□□□□□ -0.28
GCN1-202ENST00000547263 VGLL4Q14135 290 aa13.28□□□□□ -0.28
GCN1-202ENST00000547263 TTLL12Q14166 644 aaPredicted RBP13.28□□□□□ -0.28
GCN1-202ENST00000547263 UBE3CQ15386 1083 aa13.28□□□□□ -0.28
GCN1-202ENST00000547263 KBTBD3Q8NAB2 608 aa13.28□□□□□ -0.28
GCN1-202ENST00000547263 CFHR5Q9BXR6 569 aa13.28□□□□□ -0.28
GCN1-202ENST00000547263 ZNF341Q9BYN7 854 aa13.28□□□□□ -0.28
GCN1-202ENST00000547263 RWDD1Q9H446 243 aaPredicted RBP13.28□□□□□ -0.28
GCN1-202ENST00000547263 SAGE1Q9NXZ1 904 aa13.28□□□□□ -0.28
GCN1-202ENST00000547263 PTPRFP10586 1907 aa13.28□□□□□ -0.28
GCN1-202ENST00000547263 FLT1P17948 1338 aa13.28□□□□□ -0.28
GCN1-202ENST00000547263 ATAD5Q96QE3 1844 aa13.27□□□□□ -0.28
GCN1-202ENST00000547263 DYNLL1P63167 89 aaKnown RBP13.27□□□□□ -0.29
GCN1-202ENST00000547263 SLC9C2Q5TAH2 1124 aa13.27□□□□□ -0.29
GCN1-202ENST00000547263 PAXIP1Q6ZW49 1069 aaPredicted RBP13.27□□□□□ -0.29
GCN1-202ENST00000547263 TEX11Q8IYF3 940 aa13.27□□□□□ -0.29
GCN1-202ENST00000547263 DNAJC2Q99543 621 aaKnown RBP13.27□□□□□ -0.29
GCN1-202ENST00000547263 DHX36Q9H2U1 1008 aaKnown RBP13.27□□□□□ -0.29
GCN1-202ENST00000547263 ZNF532Q9HCE3 1301 aa13.27□□□□□ -0.29
GCN1-202ENST00000547263 GLRX3O76003 335 aaKnown RBP13.26□□□□□ -0.29
GCN1-202ENST00000547263 HSPA8P11142 646 aaKnown RBP13.26□□□□□ -0.29
GCN1-202ENST00000547263 MX1P20591 662 aa13.26□□□□□ -0.29
GCN1-202ENST00000547263 INPP5BP32019 993 aa13.26□□□□□ -0.29
GCN1-202ENST00000547263 NUCB1Q02818 461 aa13.26□□□□□ -0.29
GCN1-202ENST00000547263 ANKRD45Q5TZF3 282 aa13.26□□□□□ -0.29
GCN1-202ENST00000547263 SLC10A4Q96EP9 437 aa13.26□□□□□ -0.29
GCN1-202ENST00000547263 GPATCH3Q96I76 525 aa13.26□□□□□ -0.29
GCN1-202ENST00000547263 MS4A4AQ96JQ5 239 aa13.26□□□□□ -0.29
GCN1-202ENST00000547263 WRNIP1Q96S55 665 aa13.26□□□□□ -0.29
GCN1-202ENST00000547263 OSBPL3Q9H4L5 887 aa13.26□□□□□ -0.29
GCN1-202ENST00000547263 PRDM10Q9NQV6 1147 aa13.26□□□□□ -0.29
GCN1-202ENST00000547263 MANSC4A6NHS7 340 aaPredicted RBP13.25□□□□□ -0.29
GCN1-202ENST00000547263 ERC2O15083 957 aa13.25□□□□□ -0.29
GCN1-202ENST00000547263 PDE1AP54750 535 aa13.25□□□□□ -0.29
GCN1-202ENST00000547263 INHBEP58166 350 aa13.25□□□□□ -0.29
GCN1-202ENST00000547263 PICALMQ13492 652 aa13.25□□□□□ -0.29
GCN1-202ENST00000547263 NOM1Q5C9Z4 860 aaKnown RBP13.25□□□□□ -0.29
GCN1-202ENST00000547263 TSHZ3Q63HK5 1081 aa13.25□□□□□ -0.29
GCN1-202ENST00000547263 MIGA2Q7L4E1 593 aa13.25□□□□□ -0.29
GCN1-202ENST00000547263 TICAM2Q86XR7 235 aa13.25□□□□□ -0.29
GCN1-202ENST00000547263 ERO1BQ86YB8 467 aa13.25□□□□□ -0.29
GCN1-202ENST00000547263 NOL10Q9BSC4 688 aaKnown RBP13.25□□□□□ -0.29
GCN1-202ENST00000547263 DNAJC18Q9H819 358 aa13.25□□□□□ -0.29
GCN1-202ENST00000547263 CHGBP05060 677 aa13.24□□□□□ -0.29
GCN1-202ENST00000547263 SLURP2P0DP57 97 aa13.24□□□□□ -0.29
GCN1-202ENST00000547263 CTCFP49711 727 aaPredicted RBP13.24□□□□□ -0.29
GCN1-202ENST00000547263 PPATQ06203 517 aa13.24□□□□□ -0.29
GCN1-202ENST00000547263 GRM1Q13255 1194 aa13.24□□□□□ -0.29
GCN1-202ENST00000547263 CHD1LQ86WJ1 897 aa13.24□□□□□ -0.29
GCN1-202ENST00000547263 MIGA1Q8NAN2 632 aa13.24□□□□□ -0.29
GCN1-202ENST00000547263 TGFBRAP1Q8WUH2 860 aa13.24□□□□□ -0.29
GCN1-202ENST00000547263 ZKSCAN4Q969J2 545 aaPredicted RBP13.24□□□□□ -0.29
GCN1-202ENST00000547263 OPTNQ96CV9 577 aa13.24□□□□□ -0.29
GCN1-202ENST00000547263 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.24□□□□□ -0.291e-8■■■■□ 23.7
GCN1-202ENST00000547263 EHD4Q9H223 541 aa13.24□□□□□ -0.29
GCN1-202ENST00000547263 RNF186Q9NXI6 227 aa13.24□□□□□ -0.29
GCN1-202ENST00000547263 PI4KBQ9UBF8 816 aa13.24□□□□□ -0.29
GCN1-202ENST00000547263 HERC5Q9UII4 1024 aaKnown RBP13.24□□□□□ -0.29
GCN1-202ENST00000547263 TAOK2Q9UL54 1235 aa13.24□□□□□ -0.29
GCN1-202ENST00000547263 KCNH4Q9UQ05 1017 aa13.24□□□□□ -0.29
GCN1-202ENST00000547263 CSADQ9Y600 493 aa13.24□□□□□ -0.29
GCN1-202ENST00000547263 MAGEB6P1A0A0J9YX57 407 aa13.23□□□□□ -0.29
GCN1-202ENST00000547263 CTNND1O60716 968 aaKnown RBP13.23□□□□□ -0.29
GCN1-202ENST00000547263 GABPAQ06546 454 aa13.23□□□□□ -0.29
GCN1-202ENST00000547263 SREBF2Q12772 1141 aa13.23□□□□□ -0.29
GCN1-202ENST00000547263 PPIL2Q13356 520 aa13.23□□□□□ -0.29
GCN1-202ENST00000547263 SLFNL1Q499Z3 407 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms