RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 OTOFQ9HC10 1997 aa14.7□□□□□ -0.06
HDAC7-226ENST00000547259 CEP290O15078 2479 aa14.7□□□□□ -0.06
HDAC7-226ENST00000547259 MX1P20591 662 aa14.69□□□□□ -0.06
HDAC7-226ENST00000547259 PDE4AP27815 886 aa14.69□□□□□ -0.06
HDAC7-226ENST00000547259 VGLL4Q14135 290 aa14.69□□□□□ -0.06
HDAC7-226ENST00000547259 CCDC158Q5M9N0 1113 aa14.69□□□□□ -0.06
HDAC7-226ENST00000547259 TTC39AQ5SRH9 613 aa14.69□□□□□ -0.06
HDAC7-226ENST00000547259 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.69□□□□□ -0.06
HDAC7-226ENST00000547259 TMEM39BQ9GZU3 492 aa14.69□□□□□ -0.06
HDAC7-226ENST00000547259 MKI67P46013 3256 aaKnown RBP14.68□□□□□ -0.06
HDAC7-226ENST00000547259 SPDYE5A6NIY4 337 aa14.68□□□□□ -0.06
HDAC7-226ENST00000547259 PHKA1P46020 1223 aa14.68□□□□□ -0.06
HDAC7-226ENST00000547259 BCAMP50895 628 aa14.68□□□□□ -0.06
HDAC7-226ENST00000547259 PRMT2P55345 433 aa14.68□□□□□ -0.06
HDAC7-226ENST00000547259 CHAF1AQ13111 956 aaPredicted RBP14.68□□□□□ -0.06
HDAC7-226ENST00000547259 SNAPC2Q13487 334 aa14.68□□□□□ -0.06
HDAC7-226ENST00000547259 SLC9C1Q4G0N8 1177 aa14.68□□□□□ -0.06
HDAC7-226ENST00000547259 CCDC102BQ68D86 513 aa14.68□□□□□ -0.06
HDAC7-226ENST00000547259 HHIPL2Q6UWX4 724 aa14.68□□□□□ -0.06
HDAC7-226ENST00000547259 SKAP1Q86WV1 359 aa14.68□□□□□ -0.06
HDAC7-226ENST00000547259 WDR66Q8TBY9 1149 aa14.68□□□□□ -0.06
HDAC7-226ENST00000547259 ECHDC1Q9NTX5 307 aa14.68□□□□□ -0.06
HDAC7-226ENST00000547259 AOX1Q06278 1338 aa14.67□□□□□ -0.06
HDAC7-226ENST00000547259 TTC41PQ6P2S7 1318 aa14.67□□□□□ -0.06
HDAC7-226ENST00000547259 SALL3Q9BXA9 1300 aa14.67□□□□□ -0.06
HDAC7-226ENST00000547259 UQCRFS1P1P0C7P4 283 aa14.67□□□□□ -0.06
HDAC7-226ENST00000547259 RGS3P49796 1198 aa14.67□□□□□ -0.06
HDAC7-226ENST00000547259 TSHZ3Q63HK5 1081 aa14.67□□□□□ -0.06
HDAC7-226ENST00000547259 BRI3BPQ8WY22 251 aa14.67□□□□□ -0.06
HDAC7-226ENST00000547259 OTUD5Q96G74 571 aa14.67□□□□□ -0.06
HDAC7-226ENST00000547259 GNL3LQ9NVN8 582 aaKnown RBP14.67□□□□□ -0.06
HDAC7-226ENST00000547259 DOCK2Q92608 1830 aa14.66□□□□□ -0.06
HDAC7-226ENST00000547259 MAST2Q6P0Q8 1798 aa14.66□□□□□ -0.06
HDAC7-226ENST00000547259 RPAP1Q9BWH6 1393 aaPredicted RBP14.66□□□□□ -0.06
HDAC7-226ENST00000547259 POTEFA5A3E0 1075 aa14.66□□□□□ -0.06
HDAC7-226ENST00000547259 TLR2O60603 784 aa14.66□□□□□ -0.06
HDAC7-226ENST00000547259 PDE1AP54750 535 aa14.66□□□□□ -0.06
HDAC7-226ENST00000547259 PPIL2Q13356 520 aa14.66□□□□□ -0.06
HDAC7-226ENST00000547259 PLEKHM2Q8IWE5 1019 aa14.66□□□□□ -0.06
HDAC7-226ENST00000547259 WRNIP1Q96S55 665 aa14.66□□□□□ -0.06
HDAC7-226ENST00000547259 IQSEC3Q9UPP2 1182 aaPredicted RBP14.66□□□□□ -0.06
HDAC7-226ENST00000547259 MYH7P12883 1935 aa14.66□□□□□ -0.06
HDAC7-226ENST00000547259 ERC2O15083 957 aa14.65□□□□□ -0.06
HDAC7-226ENST00000547259 ARID4AP29374 1257 aaPredicted RBP14.65□□□□□ -0.06
HDAC7-226ENST00000547259 PPATQ06203 517 aa14.65□□□□□ -0.06
HDAC7-226ENST00000547259 ZNF333Q96JL9 665 aa14.65□□□□□ -0.06
HDAC7-226ENST00000547259 ZNF341Q9BYN7 854 aa14.65□□□□□ -0.06
HDAC7-226ENST00000547259 STAP2Q9UGK3 403 aa14.65□□□□□ -0.06
HDAC7-226ENST00000547259 MYO5AQ9Y4I1 1855 aaKnown RBP14.65□□□□□ -0.06
HDAC7-226ENST00000547259 SEMA3EO15041 775 aa14.64□□□□□ -0.07
HDAC7-226ENST00000547259 GLRX3O76003 335 aaKnown RBP14.64□□□□□ -0.07
HDAC7-226ENST00000547259 ATP5JP18859 108 aa14.64□□□□□ -0.07
HDAC7-226ENST00000547259 HOXD10P28358 340 aa14.64□□□□□ -0.07
HDAC7-226ENST00000547259 SLC4A8Q2Y0W8 1093 aa14.64□□□□□ -0.07
HDAC7-226ENST00000547259 APOBEC3HQ6NTF7 200 aaKnown RBP14.64□□□□□ -0.07
HDAC7-226ENST00000547259 FAM43AQ8N2R8 423 aa14.64□□□□□ -0.07
HDAC7-226ENST00000547259 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.64□□□□□ -0.07
HDAC7-226ENST00000547259 FAM151AQ8WW52 585 aa14.64□□□□□ -0.07
HDAC7-226ENST00000547259 ZNF512BQ96KM6 892 aaPredicted RBP14.64□□□□□ -0.07
HDAC7-226ENST00000547259 MCAMP43121 646 aa14.63□□□□□ -0.07
HDAC7-226ENST00000547259 LACTBP83111 547 aaPredicted RBP14.63□□□□□ -0.07
HDAC7-226ENST00000547259 RASGRF1Q13972 1273 aa14.63□□□□□ -0.07
HDAC7-226ENST00000547259 PI4K2BQ8TCG2 481 aa14.63□□□□□ -0.07
HDAC7-226ENST00000547259 CNKSR2Q8WXI2 1034 aa14.63□□□□□ -0.07
HDAC7-226ENST00000547259 DNAJC2Q99543 621 aaKnown RBP14.63□□□□□ -0.07
HDAC7-226ENST00000547259 BOLA2Q9H3K6 86 aa14.63□□□□□ -0.07
HDAC7-226ENST00000547259 OSBPL3Q9H4L5 887 aa14.63□□□□□ -0.07
HDAC7-226ENST00000547259 DENND2AQ9ULE3 1009 aa14.63□□□□□ -0.07
HDAC7-226ENST00000547259 SNCAIPQ9Y6H5 919 aa14.63□□□□□ -0.07
HDAC7-226ENST00000547259 IRF6O14896 467 aa14.62□□□□□ -0.07
HDAC7-226ENST00000547259 EN2P19622 333 aaPredicted RBP14.62□□□□□ -0.07
HDAC7-226ENST00000547259 CDAN1Q8IWY9 1227 aa14.62□□□□□ -0.07
HDAC7-226ENST00000547259 ZGPATQ8N5A5 531 aaKnown RBP14.62□□□□□ -0.07
HDAC7-226ENST00000547259 SPATA5Q8NB90 893 aa14.62□□□□□ -0.07
HDAC7-226ENST00000547259 SNRKQ9NRH2 765 aa14.62□□□□□ -0.07
HDAC7-226ENST00000547259 HMG20BQ9P0W2 317 aa14.62□□□□□ -0.07
HDAC7-226ENST00000547259 BRCA2P51587 3418 aa14.62□□□□□ -0.07
HDAC7-226ENST00000547259 BTBD19C9JJ37 291 aa14.61□□□□□ -0.07
HDAC7-226ENST00000547259 ZBTB22O15209 634 aa14.61□□□□□ -0.07
HDAC7-226ENST00000547259 CACNB3P54284 484 aa14.61□□□□□ -0.07
HDAC7-226ENST00000547259 GRIK5Q16478 980 aa14.61□□□□□ -0.07
HDAC7-226ENST00000547259 HABP4Q5JVS0 413 aaKnown RBP14.61□□□□□ -0.07
HDAC7-226ENST00000547259 TTC22Q5TAA0 569 aa14.61□□□□□ -0.07
HDAC7-226ENST00000547259 PI16Q6UXB8 463 aa14.61□□□□□ -0.07
HDAC7-226ENST00000547259 ANKRD23Q86SG2 305 aa14.61□□□□□ -0.07
HDAC7-226ENST00000547259 ZKSCAN4Q969J2 545 aaPredicted RBP14.61□□□□□ -0.07
HDAC7-226ENST00000547259 HAUS7Q99871 368 aa14.61□□□□□ -0.07
HDAC7-226ENST00000547259 PTCH2Q9Y6C5 1203 aa14.61□□□□□ -0.07
HDAC7-226ENST00000547259 PDS5AQ29RF7 1337 aaKnown RBP14.61□□□□□ -0.07
HDAC7-226ENST00000547259 MAP4K4O95819 1239 aaPredicted RBP14.6□□□□□ -0.07
HDAC7-226ENST00000547259 LDHBP07195 334 aaKnown RBP14.6□□□□□ -0.07
HDAC7-226ENST00000547259 CAPN2P17655 700 aa14.6□□□□□ -0.07
HDAC7-226ENST00000547259 ZAP70P43403 619 aa14.6□□□□□ -0.07
HDAC7-226ENST00000547259 SLF2Q8IX21 1173 aa14.6□□□□□ -0.07
HDAC7-226ENST00000547259 NKX2-3Q8TAU0 364 aa14.6□□□□□ -0.07
HDAC7-226ENST00000547259 PAG1Q9NWQ8 432 aa14.6□□□□□ -0.07
HDAC7-226ENST00000547259 ZNF112Q9UJU3 913 aa14.6□□□□□ -0.07
HDAC7-226ENST00000547259 NDUFB9Q9Y6M9 179 aa14.6□□□□□ -0.07
HDAC7-226ENST00000547259 TRIM6-TRIM34B2RNG4 842 aa14.59□□□□□ -0.07
HDAC7-226ENST00000547259 GOLIM4O00461 696 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms