RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 ZSWIM6Q9HCJ5 1215 aa19.37■□□□□ 0.69
BRF1-208ENST00000546997 TAF6LQ9Y6J9 622 aa19.37■□□□□ 0.69
BRF1-208ENST00000546997 BAZ2AQ9UIF9 1905 aaKnown RBP19.37■□□□□ 0.69
BRF1-208ENST00000546997 CDK5RAP2Q96SN8 1893 aa19.36■□□□□ 0.69
BRF1-208ENST00000546997 YDJCA8MPS7 323 aa19.36■□□□□ 0.69
BRF1-208ENST00000546997 ZKSCAN1P17029 563 aaPredicted RBP19.36■□□□□ 0.69
BRF1-208ENST00000546997 AK2P54819 239 aa19.36■□□□□ 0.69
BRF1-208ENST00000546997 RIOK1Q9BRS2 568 aaKnown RBP19.36■□□□□ 0.69
BRF1-208ENST00000546997 LAMA4Q16363 1823 aa19.36■□□□□ 0.69
BRF1-208ENST00000546997 JAKMIP1Q96N16 626 aaKnown RBP19.35■□□□□ 0.69
BRF1-208ENST00000546997 TAOK3Q9H2K8 898 aa19.35■□□□□ 0.69
BRF1-208ENST00000546997 SLC27A2O14975 620 aa19.35■□□□□ 0.69
BRF1-208ENST00000546997 LETM1O95202 739 aaPredicted RBP19.35■□□□□ 0.69
BRF1-208ENST00000546997 PTMAP06454 111 aaKnown RBP19.35■□□□□ 0.69
BRF1-208ENST00000546997 LARGE2Q8N3Y3 721 aa19.35■□□□□ 0.69
BRF1-208ENST00000546997 MAGEB6P1A0A0J9YX57 407 aa19.34■□□□□ 0.69
BRF1-208ENST00000546997 PRKAB2O43741 272 aa19.34■□□□□ 0.69
BRF1-208ENST00000546997 CPA1P15085 419 aa19.34■□□□□ 0.69
BRF1-208ENST00000546997 DYNLL1P63167 89 aaKnown RBP19.34■□□□□ 0.69
BRF1-208ENST00000546997 LIMCH1Q9UPQ0 1083 aa19.34■□□□□ 0.69
BRF1-208ENST00000546997 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.34■□□□□ 0.69
BRF1-208ENST00000546997 U3KPZ7 1027 aaPredicted RBP19.34■□□□□ 0.69
BRF1-208ENST00000546997 RUFY3Q7L099 469 aa19.33■□□□□ 0.69
BRF1-208ENST00000546997 SYT17Q9BSW7 474 aa19.33■□□□□ 0.69
BRF1-208ENST00000546997 EPB41L4AQ9HCS5 686 aaPredicted RBP19.33■□□□□ 0.69
BRF1-208ENST00000546997 SPTLC3Q9NUV7 552 aa19.33■□□□□ 0.69
BRF1-208ENST00000546997 AATFQ9NY61 560 aaKnown RBP eCLIP19.33■□□□□ 0.69
BRF1-208ENST00000546997 F8W031 263 aaPredicted RBP19.33■□□□□ 0.68
BRF1-208ENST00000546997 FGAP02671 866 aa19.33■□□□□ 0.68
BRF1-208ENST00000546997 CYP21A2P08686 494 aa19.33■□□□□ 0.68
BRF1-208ENST00000546997 IARSP41252 1262 aaKnown RBP19.33■□□□□ 0.68
BRF1-208ENST00000546997 DACT2Q5SW24 774 aa19.33■□□□□ 0.68
BRF1-208ENST00000546997 STRIP1Q5VSL9 837 aa19.33■□□□□ 0.68
BRF1-208ENST00000546997 RNF20Q5VTR2 975 aa19.33■□□□□ 0.68
BRF1-208ENST00000546997 CYP46A1Q9Y6A2 500 aa19.33■□□□□ 0.68
BRF1-208ENST00000546997 KIF20AO95235 890 aa19.32■□□□□ 0.68
BRF1-208ENST00000546997 PDRG1Q9NUG6 133 aa19.32■□□□□ 0.68
BRF1-208ENST00000546997 RPAP1Q9BWH6 1393 aaPredicted RBP19.32■□□□□ 0.68
BRF1-208ENST00000546997 USP17L3A6NCW0 530 aa19.32■□□□□ 0.68
BRF1-208ENST00000546997 USP17L4A6NCW7 530 aa19.32■□□□□ 0.68
BRF1-208ENST00000546997 TPM3P06753 285 aa19.32■□□□□ 0.68
BRF1-208ENST00000546997 ZSCAN20P17040 1043 aaPredicted RBP19.32■□□□□ 0.68
BRF1-208ENST00000546997 RASSF7Q02833 373 aa19.32■□□□□ 0.68
BRF1-208ENST00000546997 COL9A3Q14050 684 aaPredicted RBP19.32■□□□□ 0.68
BRF1-208ENST00000546997 USP17L1Q7RTZ2 530 aa19.32■□□□□ 0.68
BRF1-208ENST00000546997 SLC4A4Q9Y6R1 1079 aa19.32■□□□□ 0.68
BRF1-208ENST00000546997 MROH7-TTC4A0A0A0MT08 1334 aa19.31■□□□□ 0.68
BRF1-208ENST00000546997 GSG1L2A8MUP6 293 aa19.31■□□□□ 0.68
BRF1-208ENST00000546997 IGSF3O75054 1194 aa19.31■□□□□ 0.68
BRF1-208ENST00000546997 APPP05067 770 aa19.31■□□□□ 0.68
BRF1-208ENST00000546997 TSGA10IPQ3SY00 556 aa19.31■□□□□ 0.68
BRF1-208ENST00000546997 TMED8Q6PL24 325 aaPredicted RBP19.31■□□□□ 0.68
BRF1-208ENST00000546997 TMEM87AQ8NBN3 555 aa19.31■□□□□ 0.68
BRF1-208ENST00000546997 SDR42E1Q8WUS8 393 aa19.31■□□□□ 0.68
BRF1-208ENST00000546997 VPS33BQ9H267 617 aa19.31■□□□□ 0.68
BRF1-208ENST00000546997 PSMA5P28066 241 aa19.3■□□□□ 0.68
BRF1-208ENST00000546997 PRELPP51888 382 aa19.3■□□□□ 0.68
BRF1-208ENST00000546997 GSTO1P78417 241 aa19.3■□□□□ 0.68
BRF1-208ENST00000546997 NOLC1Q14978 699 aaKnown RBP eCLIP19.3■□□□□ 0.68
BRF1-208ENST00000546997 TTF2Q9UNY4 1162 aaKnown RBP19.3■□□□□ 0.68
BRF1-208ENST00000546997 SUGT1Q9Y2Z0 365 aa19.3■□□□□ 0.68
BRF1-208ENST00000546997 SBF1O95248 1867 aa19.3■□□□□ 0.68
BRF1-208ENST00000546997 PATL2C9JE40 543 aaKnown RBP19.3■□□□□ 0.68
BRF1-208ENST00000546997 LARP6Q9BRS8 491 aaKnown RBP19.3■□□□□ 0.68
BRF1-208ENST00000546997 FOCADQ5VW36 1801 aa19.29■□□□□ 0.68
BRF1-208ENST00000546997 GNAT2P19087 354 aa19.29■□□□□ 0.68
BRF1-208ENST00000546997 HAND2P61296 217 aa19.29■□□□□ 0.68
BRF1-208ENST00000546997 KIAA0825Q8IV33 1275 aa19.29■□□□□ 0.68
BRF1-208ENST00000546997 NIM1KQ8IY84 436 aa19.29■□□□□ 0.68
BRF1-208ENST00000546997 IFNL3Q8IZI9 196 aa19.29■□□□□ 0.68
BRF1-208ENST00000546997 LTBP3Q9NS15 1303 aa19.29■□□□□ 0.68
BRF1-208ENST00000546997 RAD17O75943 681 aa19.28■□□□□ 0.68
BRF1-208ENST00000546997 SCNN1DP51172 638 aa19.28■□□□□ 0.68
BRF1-208ENST00000546997 STOX1Q6ZVD7 989 aa19.28■□□□□ 0.68
BRF1-208ENST00000546997 GAKO14976 1311 aa19.28■□□□□ 0.68
BRF1-208ENST00000546997 ECM29Q5VYK3 1845 aa19.28■□□□□ 0.68
BRF1-208ENST00000546997 NAV1Q8NEY1 1877 aa19.28■□□□□ 0.68
BRF1-208ENST00000546997 FKBP1AP62942 108 aaKnown RBP19.28■□□□□ 0.68
BRF1-208ENST00000546997 ZSCAN31Q96LW9 406 aaPredicted RBP19.28■□□□□ 0.68
BRF1-208ENST00000546997 CTNNA3Q9UI47 895 aa19.28■□□□□ 0.68
BRF1-208ENST00000546997 ZNRF3Q9ULT6 936 aa19.28■□□□□ 0.68
BRF1-208ENST00000546997 KIF3AQ9Y496 699 aa19.28■□□□□ 0.68
BRF1-208ENST00000546997 DAGLAQ9Y4D2 1042 aa19.28■□□□□ 0.68
BRF1-208ENST00000546997 ZMYM6O95789 1325 aa19.28■□□□□ 0.68
BRF1-208ENST00000546997 DICER1Q9UPY3 1922 aaKnown RBP19.28■□□□□ 0.68
BRF1-208ENST00000546997 LAMB1P07942 1786 aa19.27■□□□□ 0.68
BRF1-208ENST00000546997 LDHCP07864 332 aa19.27■□□□□ 0.68
BRF1-208ENST00000546997 BTDP43251 543 aa19.27■□□□□ 0.68
BRF1-208ENST00000546997 DNTTIP2Q5QJE6 756 aaKnown RBP19.27■□□□□ 0.68
BRF1-208ENST00000546997 SH3RF3Q8TEJ3 882 aaPredicted RBP19.27■□□□□ 0.68
BRF1-208ENST00000546997 NBPF3Q9H094 633 aa19.27■□□□□ 0.68
BRF1-208ENST00000546997 NAPBQ9H115 298 aa19.27■□□□□ 0.68
BRF1-208ENST00000546997 GPR75-ASB3A0A0A6YYF3 556 aa19.26■□□□□ 0.67
BRF1-208ENST00000546997 PSMD14O00487 310 aa19.26■□□□□ 0.67
BRF1-208ENST00000546997 LARGE1O95461 756 aa19.26■□□□□ 0.67
BRF1-208ENST00000546997 ALX1Q15699 326 aa19.26■□□□□ 0.67
BRF1-208ENST00000546997 IMMTQ16891 758 aaKnown RBP19.26■□□□□ 0.67
BRF1-208ENST00000546997 FAM163AQ96GL9 167 aaPredicted RBP19.26■□□□□ 0.67
BRF1-208ENST00000546997 ALDH8A1Q9H2A2 487 aaPredicted RBP19.26■□□□□ 0.67
BRF1-208ENST00000546997 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms