RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 HCLS1P14317 486 aaPredicted RBP8.41□□□□□ -1.06
CCDC38-204ENST00000546816 CD96P40200 585 aa8.41□□□□□ -1.06
CCDC38-204ENST00000546816 IFI16Q16666 785 aaKnown RBP8.41□□□□□ -1.06
CCDC38-204ENST00000546816 RC3H2Q9HBD1 1191 aaKnown RBP8.41□□□□□ -1.06
CCDC38-204ENST00000546816 TMEM39AQ9NV64 488 aa8.41□□□□□ -1.06
CCDC38-204ENST00000546816 PLAGL2Q9UPG8 496 aa8.41□□□□□ -1.06
CCDC38-204ENST00000546816 RNGTTO60942 597 aaKnown RBP8.4□□□□□ -1.06
CCDC38-204ENST00000546816 DTHD1Q6ZMT9 781 aa8.4□□□□□ -1.06
CCDC38-204ENST00000546816 ERICH6Q7L0X2 663 aa8.4□□□□□ -1.06
CCDC38-204ENST00000546816 STK35Q8TDR2 534 aa8.4□□□□□ -1.06
CCDC38-204ENST00000546816 DMRTB1Q96MA1 342 aa8.4□□□□□ -1.06
CCDC38-204ENST00000546816 CEACAM5P06731 702 aa8.39□□□□□ -1.07
CCDC38-204ENST00000546816 FCGRTP55899 365 aa8.39□□□□□ -1.07
CCDC38-204ENST00000546816 HNRNPUQ00839 825 aaKnown RBP eCLIP8.39□□□□□ -1.07
CCDC38-204ENST00000546816 PPP2R3AQ06190 1150 aa8.39□□□□□ -1.07
CCDC38-204ENST00000546816 ZC3H12AQ5D1E8 599 aaKnown RBP8.39□□□□□ -1.07
CCDC38-204ENST00000546816 LRRN4CLQ8ND94 238 aa8.39□□□□□ -1.07
CCDC38-204ENST00000546816 TMC1Q8TDI8 760 aa8.39□□□□□ -1.07
CCDC38-204ENST00000546816 FAM168AQ92567 244 aa8.39□□□□□ -1.07
CCDC38-204ENST00000546816 ISL2Q96A47 359 aa8.39□□□□□ -1.07
CCDC38-204ENST00000546816 RBCK1Q9BYM8 510 aa8.39□□□□□ -1.07
CCDC38-204ENST00000546816 TIMELESSQ9UNS1 1208 aa8.39□□□□□ -1.07
CCDC38-204ENST00000546816 AOC3Q16853 763 aa8.38□□□□□ -1.07
CCDC38-204ENST00000546816 PI4K2BQ8TCG2 481 aa8.38□□□□□ -1.07
CCDC38-204ENST00000546816 KCNB2Q92953 911 aa8.38□□□□□ -1.07
CCDC38-204ENST00000546816 HRASLS5Q96KN8 279 aa8.38□□□□□ -1.07
CCDC38-204ENST00000546816 GPN3Q9UHW5 284 aaPredicted RBP8.38□□□□□ -1.07
CCDC38-204ENST00000546816 TMEM265A0A087WTH1 108 aa8.37□□□□□ -1.07
CCDC38-204ENST00000546816 ERVK-24P63145 666 aa8.37□□□□□ -1.07
CCDC38-204ENST00000546816 PI16Q6UXB8 463 aa8.37□□□□□ -1.07
CCDC38-204ENST00000546816 FAM214BQ7L5A3 538 aa8.37□□□□□ -1.07
CCDC38-204ENST00000546816 SULF2Q8IWU5 870 aa8.37□□□□□ -1.07
CCDC38-204ENST00000546816 RNF214Q8ND24 703 aa8.37□□□□□ -1.07
CCDC38-204ENST00000546816 TMEM40Q8WWA1 233 aa8.37□□□□□ -1.07
CCDC38-204ENST00000546816 TNKS2Q9H2K2 1166 aa8.37□□□□□ -1.07
CCDC38-204ENST00000546816 CACNA2D2Q9NY47 1150 aa8.37□□□□□ -1.07
CCDC38-204ENST00000546816 XRCC5P13010 732 aaKnown RBP8.36□□□□□ -1.07
CCDC38-204ENST00000546816 ARNTP27540 789 aa8.36□□□□□ -1.07
CCDC38-204ENST00000546816 ZNF124Q15973 351 aa8.36□□□□□ -1.07
CCDC38-204ENST00000546816 TOP6BLQ8N6T0 577 aa8.36□□□□□ -1.07
CCDC38-204ENST00000546816 HEXIM2Q96MH2 286 aaKnown RBP8.36□□□□□ -1.07
CCDC38-204ENST00000546816 FARP2O94887 1054 aaPredicted RBP8.35□□□□□ -1.07
CCDC38-204ENST00000546816 ZNF252P-AS1Q0IIN9 211 aa8.35□□□□□ -1.07
CCDC38-204ENST00000546816 BCO2Q9BYV7 579 aa8.35□□□□□ -1.07
CCDC38-204ENST00000546816 PPP4R2Q9NY27 417 aa8.35□□□□□ -1.07
CCDC38-204ENST00000546816 SNX11Q9Y5W9 270 aa8.35□□□□□ -1.07
CCDC38-204ENST00000546816 ARHGAP27Q6ZUM4 889 aa8.34□□□□□ -1.07
CCDC38-204ENST00000546816 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.34□□□□□ -1.07
CCDC38-204ENST00000546816 GPBAR1Q8TDU6 330 aa8.34□□□□□ -1.07
CCDC38-204ENST00000546816 NLRP2Q9NX02 1062 aa8.34□□□□□ -1.07
CCDC38-204ENST00000546816 DBX1A6NMT0 343 aa8.33□□□□□ -1.08
CCDC38-204ENST00000546816 NME2P22392 152 aa8.33□□□□□ -1.08
CCDC38-204ENST00000546816 ANGEL2Q5VTE6 544 aaKnown RBP8.33□□□□□ -1.08
CCDC38-204ENST00000546816 MAP1SQ66K74 1059 aaPredicted RBP8.33□□□□□ -1.08
CCDC38-204ENST00000546816 SLC23A3Q6PIS1 610 aa8.33□□□□□ -1.08
CCDC38-204ENST00000546816 RETREG2Q8NC44 543 aa8.33□□□□□ -1.08
CCDC38-204ENST00000546816 ITIH2P19823 946 aa8.32□□□□□ -1.08
CCDC38-204ENST00000546816 NTF4P34130 210 aa8.32□□□□□ -1.08
CCDC38-204ENST00000546816 LCE4AQ5TA78 99 aa8.32□□□□□ -1.08
CCDC38-204ENST00000546816 TMC7Q7Z402 723 aa8.32□□□□□ -1.08
CCDC38-204ENST00000546816 FLAD1Q8NFF5 587 aa8.32□□□□□ -1.08
CCDC38-204ENST00000546816 EMILIN2Q9BXX0 1053 aa8.32□□□□□ -1.08
CCDC38-204ENST00000546816 KRTAP4-9Q9BYQ8 210 aa8.32□□□□□ -1.08
CCDC38-204ENST00000546816 SSU72Q9NP77 194 aaKnown RBP8.32□□□□□ -1.08
CCDC38-204ENST00000546816 IGF2BP3O00425 579 aaKnown RBP eCLIP8.31□□□□□ -1.08
CCDC38-204ENST00000546816 NXPE4Q6UWF7 544 aa8.31□□□□□ -1.08
CCDC38-204ENST00000546816 MPRIPQ6WCQ1 1025 aa8.31□□□□□ -1.08
CCDC38-204ENST00000546816 AKAP2Q9Y2D5 859 aa8.31□□□□□ -1.08
CCDC38-204ENST00000546816 RING1Q06587 406 aa8.3□□□□□ -1.08
CCDC38-204ENST00000546816 MESP2Q0VG99 397 aa8.3□□□□□ -1.08
CCDC38-204ENST00000546816 SPACA3Q8IXA5 215 aa8.3□□□□□ -1.08
CCDC38-204ENST00000546816 C3orf58Q8NDZ4 430 aa8.3□□□□□ -1.08
CCDC38-204ENST00000546816 NECAB3Q96P71 396 aaPredicted RBP8.3□□□□□ -1.08
CCDC38-204ENST00000546816 SOWAHDA6NJG2 315 aa8.29□□□□□ -1.08
CCDC38-204ENST00000546816 DSC3Q14574 896 aa8.29□□□□□ -1.08
CCDC38-204ENST00000546816 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.29□□□□□ -1.08
CCDC38-204ENST00000546816 PPM1JQ5JR12 505 aa8.29□□□□□ -1.08
CCDC38-204ENST00000546816 SPOCD1Q6ZMY3 1216 aa8.29□□□□□ -1.08
CCDC38-204ENST00000546816 UBE3DQ7Z6J8 389 aa8.29□□□□□ -1.08
CCDC38-204ENST00000546816 ASB11Q8WXH4 323 aa8.29□□□□□ -1.08
CCDC38-204ENST00000546816 PRDM10Q9NQV6 1147 aa8.29□□□□□ -1.08
CCDC38-204ENST00000546816 PRDM7Q9NQW5 492 aa8.29□□□□□ -1.08
CCDC38-204ENST00000546816 GTF2IRD1Q9UHL9 959 aa8.29□□□□□ -1.08
CCDC38-204ENST00000546816 BMP6P22004 513 aa8.28□□□□□ -1.08
CCDC38-204ENST00000546816 NKPD1Q17RQ9 610 aa8.28□□□□□ -1.08
CCDC38-204ENST00000546816 KSR1Q8IVT5 923 aa8.28□□□□□ -1.08
CCDC38-204ENST00000546816 CCER1Q8TC90 406 aaPredicted RBP8.28□□□□□ -1.08
CCDC38-204ENST00000546816 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.28□□□□□ -1.08
CCDC38-204ENST00000546816 ENOX2Q16206 610 aaKnown RBP8.27□□□□□ -1.09
CCDC38-204ENST00000546816 FBLN7Q53RD9 439 aa8.27□□□□□ -1.09
CCDC38-204ENST00000546816 ZSWIM9Q86XI8 627 aa8.27□□□□□ -1.09
CCDC38-204ENST00000546816 GRIN3AQ8TCU5 1115 aa8.27□□□□□ -1.09
CCDC38-204ENST00000546816 ACSBG1Q96GR2 724 aa8.27□□□□□ -1.09
CCDC38-204ENST00000546816 CBX8Q9HC52 389 aa8.27□□□□□ -1.09
CCDC38-204ENST00000546816 CSADQ9Y600 493 aa8.27□□□□□ -1.09
CCDC38-204ENST00000546816 ZNF503-AS2A6NEH8 195 aa8.26□□□□□ -1.09
CCDC38-204ENST00000546816 ENC1O14682 589 aa8.26□□□□□ -1.09
CCDC38-204ENST00000546816 TRIM37O94972 964 aa8.26□□□□□ -1.09
CCDC38-204ENST00000546816 EOMESO95936 686 aa8.26□□□□□ -1.09
CCDC38-204ENST00000546816 PKN1Q16512 942 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms