RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 OPTNQ96CV9 577 aa18.73■□□□□ 0.59
SSH1-204ENST00000546697 IL1RAPL2Q9NP60 686 aa18.73■□□□□ 0.59
SSH1-204ENST00000546697 PIH1D3Q9NQM4 214 aaKnown RBP18.73■□□□□ 0.59
SSH1-204ENST00000546697 SNRKQ9NRH2 765 aa18.73■□□□□ 0.59
SSH1-204ENST00000546697 RAI14Q9P0K7 980 aa18.73■□□□□ 0.59
SSH1-204ENST00000546697 CSADQ9Y600 493 aa18.73■□□□□ 0.59
SSH1-204ENST00000546697 PLCG2P16885 1265 aa18.72■□□□□ 0.59
SSH1-204ENST00000546697 TCP10Q12799 353 aa18.72■□□□□ 0.59
SSH1-204ENST00000546697 NAA16Q6N069 864 aaPredicted RBP18.72■□□□□ 0.59
SSH1-204ENST00000546697 METTL16Q86W50 562 aaKnown RBP18.72■□□□□ 0.59
SSH1-204ENST00000546697 IFNL1Q8IU54 200 aa18.72■□□□□ 0.59
SSH1-204ENST00000546697 WRNIP1Q96S55 665 aa18.72■□□□□ 0.59
SSH1-204ENST00000546697 ZCCHC17Q9NP64 241 aaKnown RBP18.72■□□□□ 0.59
SSH1-204ENST00000546697 TSKSQ9UJT2 592 aa18.72■□□□□ 0.59
SSH1-204ENST00000546697 DDTLA6NHG4 134 aaPredicted RBP18.71■□□□□ 0.59
SSH1-204ENST00000546697 IGF2BP3O00425 579 aaKnown RBP eCLIP18.71■□□□□ 0.59
SSH1-204ENST00000546697 PPATQ06203 517 aa18.71■□□□□ 0.59
SSH1-204ENST00000546697 AAMPQ13685 434 aa18.71■□□□□ 0.59
SSH1-204ENST00000546697 ADGRA1Q86SQ6 560 aa18.71■□□□□ 0.59
SSH1-204ENST00000546697 ELP3Q9H9T3 547 aa18.71■□□□□ 0.59
SSH1-204ENST00000546697 BAG3O95817 575 aa18.7■□□□□ 0.58
SSH1-204ENST00000546697 ATP5JP18859 108 aa18.7■□□□□ 0.58
SSH1-204ENST00000546697 PPIL2Q13356 520 aa18.7■□□□□ 0.58
SSH1-204ENST00000546697 TTF1Q15361 905 aaPredicted RBP18.7■□□□□ 0.58
SSH1-204ENST00000546697 PTPN18Q99952 460 aa18.7■□□□□ 0.58
SSH1-204ENST00000546697 LRRCC1Q9C099 1032 aa18.7■□□□□ 0.58
SSH1-204ENST00000546697 OSBPL5Q9H0X9 879 aaPredicted RBP18.7■□□□□ 0.58
SSH1-204ENST00000546697 KCNH4Q9UQ05 1017 aa18.7■□□□□ 0.58
SSH1-204ENST00000546697 CASP8AP2Q9UKL3 1982 aa18.7■□□□□ 0.58
SSH1-204ENST00000546697 CDK5RAP2Q96SN8 1893 aa18.69■□□□□ 0.58
SSH1-204ENST00000546697 INPP5BP32019 993 aa18.69■□□□□ 0.58
SSH1-204ENST00000546697 GTF2A2P52657 109 aa18.69■□□□□ 0.58
SSH1-204ENST00000546697 ZKSCAN4Q969J2 545 aaPredicted RBP18.69■□□□□ 0.58
SSH1-204ENST00000546697 ANTXR1Q9H6X2 564 aa18.69■□□□□ 0.58
SSH1-204ENST00000546697 PCDHB15Q9Y5E8 787 aa18.69■□□□□ 0.58
SSH1-204ENST00000546697 IFIT2P09913 472 aaKnown RBP18.68■□□□□ 0.58
SSH1-204ENST00000546697 MIGA2Q7L4E1 593 aa18.68■□□□□ 0.58
SSH1-204ENST00000546697 CNKSR2Q8WXI2 1034 aa18.68■□□□□ 0.58
SSH1-204ENST00000546697 BRI3BPQ8WY22 251 aa18.68■□□□□ 0.58
SSH1-204ENST00000546697 DHX36Q9H2U1 1008 aaKnown RBP18.68■□□□□ 0.58
SSH1-204ENST00000546697 SIPA1L1O43166 1804 aa18.67■□□□□ 0.58
SSH1-204ENST00000546697 GPR25O00155 361 aa18.67■□□□□ 0.58
SSH1-204ENST00000546697 CAPN15O75808 1086 aa18.67■□□□□ 0.58
SSH1-204ENST00000546697 MAP3K12Q12852 859 aa18.67■□□□□ 0.58
SSH1-204ENST00000546697 MKRN3Q13064 507 aaKnown RBP18.67■□□□□ 0.58
SSH1-204ENST00000546697 OTUD7BQ6GQQ9 843 aa18.67■□□□□ 0.58
SSH1-204ENST00000546697 SH3RF3Q8TEJ3 882 aaPredicted RBP18.67■□□□□ 0.58
SSH1-204ENST00000546697 IRF6O14896 467 aa18.66■□□□□ 0.58
SSH1-204ENST00000546697 CTNND1O60716 968 aaKnown RBP18.66■□□□□ 0.58
SSH1-204ENST00000546697 TEX11Q8IYF3 940 aa18.66■□□□□ 0.58
SSH1-204ENST00000546697 HAUS7Q99871 368 aa18.66■□□□□ 0.58
SSH1-204ENST00000546697 AATFQ9NY61 560 aaKnown RBP eCLIP18.66■□□□□ 0.58
SSH1-204ENST00000546697 HERC5Q9UII4 1024 aaKnown RBP18.66■□□□□ 0.58
SSH1-204ENST00000546697 HTTP42858 3142 aa18.66■□□□□ 0.58
SSH1-204ENST00000546697 TCRBV5S4A2TA0A5A2 114 aa18.65■□□□□ 0.58
SSH1-204ENST00000546697 TBC1D8O95759 1140 aa18.65■□□□□ 0.58
SSH1-204ENST00000546697 CETPP11597 493 aa18.65■□□□□ 0.58
SSH1-204ENST00000546697 SNAPC2Q13487 334 aa18.65■□□□□ 0.58
SSH1-204ENST00000546697 MOGSQ13724 837 aa18.65■□□□□ 0.58
SSH1-204ENST00000546697 SCYL3Q8IZE3 742 aa18.65■□□□□ 0.58
SSH1-204ENST00000546697 OTUD5Q96G74 571 aa18.65■□□□□ 0.58
SSH1-204ENST00000546697 RIOK1Q9BRS2 568 aaKnown RBP18.65■□□□□ 0.58
SSH1-204ENST00000546697 NOL10Q9BSC4 688 aaKnown RBP18.65■□□□□ 0.58
SSH1-204ENST00000546697 R3HDMLQ9H3Y0 253 aa18.65■□□□□ 0.58
SSH1-204ENST00000546697 FLT1P17948 1338 aa18.65■□□□□ 0.58
SSH1-204ENST00000546697 DDX60LQ5H9U9 1706 aaKnown RBP18.65■□□□□ 0.58
SSH1-204ENST00000546697 DOCK1Q14185 1865 aa18.65■□□□□ 0.58
SSH1-204ENST00000546697 AK9Q5TCS8 1911 aa18.64■□□□□ 0.58
SSH1-204ENST00000546697 CXCL11O14625 94 aa18.64■□□□□ 0.57
SSH1-204ENST00000546697 IDH1O75874 414 aaKnown RBP18.64■□□□□ 0.57
SSH1-204ENST00000546697 CYP7A1P22680 504 aa18.64■□□□□ 0.57
SSH1-204ENST00000546697 PICALMQ13492 652 aa18.64■□□□□ 0.57
SSH1-204ENST00000546697 ZNF296Q8WUU4 475 aaPredicted RBP18.64■□□□□ 0.57
SSH1-204ENST00000546697 PI4KBQ9UBF8 816 aa18.64■□□□□ 0.57
SSH1-204ENST00000546697 NDUFB9Q9Y6M9 179 aa18.64■□□□□ 0.57
SSH1-204ENST00000546697 PHIPQ8WWQ0 1821 aa18.64■□□□□ 0.57
SSH1-204ENST00000546697 CCL15-CCL14A0A0B4J2E2 113 aa18.63■□□□□ 0.57
SSH1-204ENST00000546697 PTPRAP18433 802 aa18.63■□□□□ 0.57
SSH1-204ENST00000546697 HDAC1Q13547 482 aaPredicted RBP18.63■□□□□ 0.57
SSH1-204ENST00000546697 CCL15Q16663 113 aa18.63■□□□□ 0.57
SSH1-204ENST00000546697 CTU1Q7Z7A3 348 aaKnown RBP18.63■□□□□ 0.57
SSH1-204ENST00000546697 MAGEB6Q8N7X4 407 aa18.63■□□□□ 0.57
SSH1-204ENST00000546697 TAOK2Q9UL54 1235 aa18.63■□□□□ 0.57
SSH1-204ENST00000546697 APBB1O00213 710 aa18.62■□□□□ 0.57
SSH1-204ENST00000546697 PDE6AP16499 860 aa18.62■□□□□ 0.57
SSH1-204ENST00000546697 PKN2Q16513 984 aaKnown RBP18.62■□□□□ 0.57
SSH1-204ENST00000546697 FOXP4Q8IVH2 680 aaPredicted RBP18.62■□□□□ 0.57
SSH1-204ENST00000546697 ZSCAN29Q8IWY8 852 aaPredicted RBP18.62■□□□□ 0.57
SSH1-204ENST00000546697 ABHD8Q96I13 439 aa18.62■□□□□ 0.57
SSH1-204ENST00000546697 TBC1D2Q9BYX2 928 aa18.62■□□□□ 0.57
SSH1-204ENST00000546697 MCOLN1Q9GZU1 580 aa18.62■□□□□ 0.57
SSH1-204ENST00000546697 GINM1Q9NU53 330 aa18.62■□□□□ 0.57
SSH1-204ENST00000546697 PAG1Q9NWQ8 432 aa18.62■□□□□ 0.57
SSH1-204ENST00000546697 AFG3L2Q9Y4W6 797 aa18.62■□□□□ 0.57
SSH1-204ENST00000546697 FKTNO75072 461 aa18.61■□□□□ 0.57
SSH1-204ENST00000546697 CRHR2Q13324 411 aa18.61■□□□□ 0.57
SSH1-204ENST00000546697 ANKRD23Q86SG2 305 aa18.61■□□□□ 0.57
SSH1-204ENST00000546697 FAM43AQ8N2R8 423 aa18.61■□□□□ 0.57
SSH1-204ENST00000546697 TGFBRAP1Q8WUH2 860 aa18.61■□□□□ 0.57
SSH1-204ENST00000546697 YTHDC1Q96MU7 727 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms