RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 AFG3L2Q9Y4W6 797 aa13.7□□□□□ -0.22
TMEM116-203ENST00000546537 ZHX2Q9Y6X8 837 aa13.7□□□□□ -0.22
TMEM116-203ENST00000546537 MUC3AQ02505 3323 aa13.7□□□□□ -0.22
TMEM116-203ENST00000546537 PRUNE2Q8WUY3 3088 aa13.7□□□□□ -0.22
TMEM116-203ENST00000546537 DOCK1Q14185 1865 aa13.7□□□□□ -0.22
TMEM116-203ENST00000546537 MYBBP1AQ9BQG0 1328 aaKnown RBP13.69□□□□□ -0.22
TMEM116-203ENST00000546537 APAF1O14727 1248 aa13.69□□□□□ -0.22
TMEM116-203ENST00000546537 FRAT2O75474 233 aaPredicted RBP13.69□□□□□ -0.22
TMEM116-203ENST00000546537 COL6A1P12109 1028 aa13.69□□□□□ -0.22
TMEM116-203ENST00000546537 PTPRAP18433 802 aa13.69□□□□□ -0.22
TMEM116-203ENST00000546537 MDM2Q00987 491 aaPredicted RBP13.69□□□□□ -0.22
TMEM116-203ENST00000546537 TCP10Q12799 353 aa13.69□□□□□ -0.22
TMEM116-203ENST00000546537 TRIM32Q13049 653 aa13.69□□□□□ -0.22
TMEM116-203ENST00000546537 FKBP5Q13451 457 aaPredicted RBP13.69□□□□□ -0.22
TMEM116-203ENST00000546537 FAM110CQ1W6H9 321 aa13.69□□□□□ -0.22
TMEM116-203ENST00000546537 SCYL3Q8IZE3 742 aa13.69□□□□□ -0.22
TMEM116-203ENST00000546537 SYMPKQ92797 1274 aaKnown RBP13.69□□□□□ -0.22
TMEM116-203ENST00000546537 CDX2Q99626 313 aaPredicted RBP13.69□□□□□ -0.22
TMEM116-203ENST00000546537 PHF20L1A8MW92 1017 aa13.68□□□□□ -0.22
TMEM116-203ENST00000546537 TWISTNBQ3B726 338 aaPredicted RBP13.68□□□□□ -0.22
TMEM116-203ENST00000546537 MAFAQ8NHW3 353 aaPredicted RBP13.68□□□□□ -0.22
TMEM116-203ENST00000546537 PUS3Q9BZE2 481 aaKnown RBP13.68□□□□□ -0.22
TMEM116-203ENST00000546537 GJD2Q9UKL4 321 aa13.68□□□□□ -0.22
TMEM116-203ENST00000546537 ATRNL1Q5VV63 1379 aa13.68□□□□□ -0.22
TMEM116-203ENST00000546537 MAST2Q6P0Q8 1798 aa13.68□□□□□ -0.22
TMEM116-203ENST00000546537 CDH23Q9H251 3354 aa13.67□□□□□ -0.22
TMEM116-203ENST00000546537 NFIAQ12857 509 aa13.67□□□□□ -0.22
TMEM116-203ENST00000546537 CAVIN4Q5BKX8 364 aa13.67□□□□□ -0.22
TMEM116-203ENST00000546537 TSR2Q969E8 191 aaKnown RBP13.67□□□□□ -0.22
TMEM116-203ENST00000546537 PICK1Q9NRD5 415 aa13.67□□□□□ -0.22
TMEM116-203ENST00000546537 FAM198AQ9UFP1 575 aa13.67□□□□□ -0.22
TMEM116-203ENST00000546537 AGTPBP1Q9UPW5 1226 aa13.67□□□□□ -0.22
TMEM116-203ENST00000546537 MROH5Q6ZUA9 1318 aa13.66□□□□□ -0.22
TMEM116-203ENST00000546537 LOC285556D6RIA3 1793 aa13.66□□□□□ -0.22
TMEM116-203ENST00000546537 LRRC26Q2I0M4 334 aa13.66□□□□□ -0.22
TMEM116-203ENST00000546537 BEND3Q5T5X7 828 aa13.66□□□□□ -0.22
TMEM116-203ENST00000546537 MAP3K21Q5TCX8 1036 aa13.66□□□□□ -0.22
TMEM116-203ENST00000546537 CDC42EP5Q6NZY7 148 aa13.66□□□□□ -0.22
TMEM116-203ENST00000546537 TRIB2Q92519 343 aa13.66□□□□□ -0.22
TMEM116-203ENST00000546537 LTBP2Q14767 1821 aa13.66□□□□□ -0.22
TMEM116-203ENST00000546537 FRMPD3Q5JV73 1810 aa13.66□□□□□ -0.22
TMEM116-203ENST00000546537 SEMA6BQ9H3T3 888 aa13.65□□□□□ -0.22
TMEM116-203ENST00000546537 PNMA3Q9UL41 463 aa13.65□□□□□ -0.22
TMEM116-203ENST00000546537 DAGLAQ9Y4D2 1042 aa13.65□□□□□ -0.22
TMEM116-203ENST00000546537 TTC28Q96AY4 2481 aa13.64□□□□□ -0.23
TMEM116-203ENST00000546537 GRM8O00222 908 aa13.64□□□□□ -0.23
TMEM116-203ENST00000546537 MAP3K10Q02779 954 aa13.64□□□□□ -0.23
TMEM116-203ENST00000546537 TREML2Q5T2D2 321 aa13.64□□□□□ -0.23
TMEM116-203ENST00000546537 ZFPM1Q8IX07 1006 aa13.64□□□□□ -0.23
TMEM116-203ENST00000546537 TRIM75PA6NK02 468 aa13.63□□□□□ -0.23
TMEM116-203ENST00000546537 PRKAR2AP13861 404 aaKnown RBP13.63□□□□□ -0.23
TMEM116-203ENST00000546537 GCLCP48506 637 aaPredicted RBP13.63□□□□□ -0.23
TMEM116-203ENST00000546537 VGLL2Q8N8G2 317 aa13.63□□□□□ -0.23
TMEM116-203ENST00000546537 LBHD1Q9BQE6 289 aaPredicted RBP13.63□□□□□ -0.23
TMEM116-203ENST00000546537 DNAH12Q6ZR08 3092 aa13.62□□□□□ -0.23
TMEM116-203ENST00000546537 F6X3S4 739 aa13.62□□□□□ -0.23
TMEM116-203ENST00000546537 TNFRSF10AO00220 468 aa13.62□□□□□ -0.23
TMEM116-203ENST00000546537 CTNND1O60716 968 aaKnown RBP13.62□□□□□ -0.23
TMEM116-203ENST00000546537 PDE8BO95263 885 aa13.62□□□□□ -0.23
TMEM116-203ENST00000546537 PLA2G5P39877 138 aa13.62□□□□□ -0.23
TMEM116-203ENST00000546537 DIXDC1Q155Q3 683 aa13.62□□□□□ -0.23
TMEM116-203ENST00000546537 LHX8Q68G74 356 aa13.62□□□□□ -0.23
TMEM116-203ENST00000546537 PROCA1Q8NCQ7 364 aaPredicted RBP13.62□□□□□ -0.23
TMEM116-203ENST00000546537 WDR66Q8TBY9 1149 aa13.62□□□□□ -0.23
TMEM116-203ENST00000546537 MYLIPQ8WY64 445 aa13.62□□□□□ -0.23
TMEM116-203ENST00000546537 USP40Q9NVE5 1235 aa13.62□□□□□ -0.23
TMEM116-203ENST00000546537 RAPGEFL1Q9UHV5 662 aa13.62□□□□□ -0.23
TMEM116-203ENST00000546537 LRRFIP2Q9Y608 721 aaKnown RBP13.62□□□□□ -0.23
TMEM116-203ENST00000546537 KIF16BQ96L93 1317 aa13.62□□□□□ -0.23
TMEM116-203ENST00000546537 MYH2Q9UKX2 1941 aa13.61□□□□□ -0.23
TMEM116-203ENST00000546537 CYP2B6P20813 491 aa13.61□□□□□ -0.23
TMEM116-203ENST00000546537 LRRC24Q50LG9 513 aa13.61□□□□□ -0.23
TMEM116-203ENST00000546537 METTL24Q5JXM2 366 aa13.61□□□□□ -0.23
TMEM116-203ENST00000546537 KAZALD1Q96I82 304 aa13.61□□□□□ -0.23
TMEM116-203ENST00000546537 TTYH1Q9H313 450 aaPredicted RBP13.61□□□□□ -0.23
TMEM116-203ENST00000546537 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
TMEM116-203ENST00000546537 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.61□□□□□ -0.23
TMEM116-203ENST00000546537 ATAD5Q96QE3 1844 aa13.61□□□□□ -0.23
TMEM116-203ENST00000546537 ENTPD3O75355 529 aa13.6□□□□□ -0.23
TMEM116-203ENST00000546537 XRCC5P13010 732 aaKnown RBP13.6□□□□□ -0.23
TMEM116-203ENST00000546537 FOSL2P15408 326 aa13.6□□□□□ -0.23
TMEM116-203ENST00000546537 CACNB2Q08289 660 aaPredicted RBP13.6□□□□□ -0.23
TMEM116-203ENST00000546537 TJAP1Q5JTD0 557 aa13.6□□□□□ -0.23
TMEM116-203ENST00000546537 SH3BP5LQ7L8J4 393 aa13.6□□□□□ -0.23
TMEM116-203ENST00000546537 CCDC84Q86UT8 332 aaPredicted RBP13.6□□□□□ -0.23
TMEM116-203ENST00000546537 IDI2Q9BXS1 227 aa13.6□□□□□ -0.23
TMEM116-203ENST00000546537 C9orf78Q9NZ63 289 aaPredicted RBP13.6□□□□□ -0.23
TMEM116-203ENST00000546537 SLURP2P0DP57 97 aa13.59□□□□□ -0.23
TMEM116-203ENST00000546537 PRDX5P30044 214 aa13.59□□□□□ -0.23
TMEM116-203ENST00000546537 CCND3P30281 292 aaPredicted RBP13.59□□□□□ -0.23
TMEM116-203ENST00000546537 RGS3P49796 1198 aa13.59□□□□□ -0.23
TMEM116-203ENST00000546537 PABPC4Q13310 644 aaKnown RBP eCLIP13.59□□□□□ -0.23
TMEM116-203ENST00000546537 SHHQ15465 462 aa13.59□□□□□ -0.23
TMEM116-203ENST00000546537 TRMT44Q8IYL2 757 aaKnown RBP13.59□□□□□ -0.23
TMEM116-203ENST00000546537 SUCLG2Q96I99 432 aa13.59□□□□□ -0.23
TMEM116-203ENST00000546537 NUDT12Q9BQG2 462 aa13.59□□□□□ -0.23
TMEM116-203ENST00000546537 MORF4L1Q9UBU8 362 aa13.59□□□□□ -0.23
TMEM116-203ENST00000546537 RFX7Q2KHR2 1363 aa13.58□□□□□ -0.23
TMEM116-203ENST00000546537 DDTLA6NHG4 134 aaPredicted RBP13.58□□□□□ -0.24
TMEM116-203ENST00000546537 IFIT1P09914 478 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms