RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 MATR3P43243 847 aaKnown RBP eCLIP16.82■□□□□ 0.28
HOXC11-202ENST00000546378 PPP2R3AQ06190 1150 aa16.82■□□□□ 0.28
HOXC11-202ENST00000546378 TMEM51Q9NW97 253 aa16.82■□□□□ 0.28
HOXC11-202ENST00000546378 USP21Q9UK80 565 aa16.82■□□□□ 0.28
HOXC11-202ENST00000546378 HSPA1LP34931 641 aa16.81■□□□□ 0.28
HOXC11-202ENST00000546378 ZNF569Q5MCW4 686 aa16.81■□□□□ 0.28
HOXC11-202ENST00000546378 KRT40Q6A162 431 aa16.81■□□□□ 0.28
HOXC11-202ENST00000546378 BAG1Q99933 345 aaPredicted RBP16.81■□□□□ 0.28
HOXC11-202ENST00000546378 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
HOXC11-202ENST00000546378 GOLGA8AA7E2F4 631 aa16.81■□□□□ 0.28
HOXC11-202ENST00000546378 IFIT3O14879 490 aaKnown RBP16.81■□□□□ 0.28
HOXC11-202ENST00000546378 RNF113AO15541 343 aaKnown RBP16.81■□□□□ 0.28
HOXC11-202ENST00000546378 PRR29P0C7W0 189 aa16.81■□□□□ 0.28
HOXC11-202ENST00000546378 ADALQ6DHV7 355 aa16.81■□□□□ 0.28
HOXC11-202ENST00000546378 SMIM5Q71RC9 77 aa16.81■□□□□ 0.28
HOXC11-202ENST00000546378 MARCH10Q8NA82 808 aaPredicted RBP16.81■□□□□ 0.28
HOXC11-202ENST00000546378 UIMC1Q96RL1 719 aa16.81■□□□□ 0.28
HOXC11-202ENST00000546378 GPAA1O43292 621 aa16.81■□□□□ 0.28
HOXC11-202ENST00000546378 N4BP1O75113 896 aaKnown RBP16.81■□□□□ 0.28
HOXC11-202ENST00000546378 PDE4CQ08493 712 aa16.81■□□□□ 0.28
HOXC11-202ENST00000546378 ABCF2Q9UG63 623 aa16.81■□□□□ 0.28
HOXC11-202ENST00000546378 ENC1O14682 589 aa16.8■□□□□ 0.28
HOXC11-202ENST00000546378 PLA2G4AP47712 749 aa16.8■□□□□ 0.28
HOXC11-202ENST00000546378 GABPB1Q06547 395 aaPredicted RBP16.8■□□□□ 0.28
HOXC11-202ENST00000546378 SMC1AQ14683 1233 aaKnown RBP16.8■□□□□ 0.28
HOXC11-202ENST00000546378 TMEM67Q5HYA8 995 aa16.8■□□□□ 0.28
HOXC11-202ENST00000546378 TTC19Q6DKK2 380 aaPredicted RBP16.8■□□□□ 0.28
HOXC11-202ENST00000546378 BLZF1Q9H2G9 400 aa16.8■□□□□ 0.28
HOXC11-202ENST00000546378 RSPH14Q9UHP6 348 aa16.8■□□□□ 0.28
HOXC11-202ENST00000546378 ATP6V1AP38606 617 aa16.8■□□□□ 0.28
HOXC11-202ENST00000546378 SF3A3Q12874 501 aaKnown RBP eCLIP16.8■□□□□ 0.28
HOXC11-202ENST00000546378 ENGASEQ8NFI3 743 aa16.8■□□□□ 0.28
HOXC11-202ENST00000546378 PCMTD1Q96MG8 357 aaPredicted RBP16.8■□□□□ 0.28
HOXC11-202ENST00000546378 HAUS7Q99871 368 aa16.8■□□□□ 0.28
HOXC11-202ENST00000546378 PPP2R2CQ9Y2T4 447 aa16.8■□□□□ 0.28
HOXC11-202ENST00000546378 SPATA31A1Q5TZJ5 1347 aa16.8■□□□□ 0.28
HOXC11-202ENST00000546378 NEMFO60524 1076 aa16.8■□□□□ 0.28
HOXC11-202ENST00000546378 IARSP41252 1262 aaKnown RBP16.8■□□□□ 0.28
HOXC11-202ENST00000546378 MYL5Q02045 173 aa16.8■□□□□ 0.28
HOXC11-202ENST00000546378 NKX1-1Q15270 411 aaPredicted RBP16.8■□□□□ 0.28
HOXC11-202ENST00000546378 FBXO18Q8NFZ0 1043 aa16.8■□□□□ 0.28
HOXC11-202ENST00000546378 CERKQ8TCT0 537 aa16.8■□□□□ 0.28
HOXC11-202ENST00000546378 SERTAD1Q9UHV2 236 aa16.8■□□□□ 0.28
HOXC11-202ENST00000546378 GUCY1A2P33402 732 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 CCDC150Q8NCX0 1101 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 XAGE2Q96GT9 111 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 CDC5LQ99459 802 aaKnown RBP16.79■□□□□ 0.28
HOXC11-202ENST00000546378 VPS16Q9H269 839 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 ZBTB1Q9Y2K1 713 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 FAM205CA6NFA0 338 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 SMIM22K7EJ46 135 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 SASH3O75995 380 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 NLRP12P59046 1061 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 CCDC102BQ68D86 513 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 LDHAL6AQ6ZMR3 332 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 RGS22Q8NE09 1264 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 KCNG4Q8TDN1 519 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 PDE11AQ9HCR9 933 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 ARFGAP3Q9NP61 516 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 KCNH3Q9ULD8 1083 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 FHOD1Q9Y613 1164 aa16.79■□□□□ 0.28
HOXC11-202ENST00000546378 TEX33O43247 280 aa16.78■□□□□ 0.28
HOXC11-202ENST00000546378 CABP5Q9NP86 173 aa16.78■□□□□ 0.28
HOXC11-202ENST00000546378 FANCGO15287 622 aa16.78■□□□□ 0.28
HOXC11-202ENST00000546378 CAPN2P17655 700 aa16.78■□□□□ 0.28
HOXC11-202ENST00000546378 CPLX2Q6PUV4 134 aaKnown RBP16.78■□□□□ 0.28
HOXC11-202ENST00000546378 KIF6Q6ZMV9 814 aa16.78■□□□□ 0.28
HOXC11-202ENST00000546378 PLBD2Q8NHP8 589 aa16.78■□□□□ 0.28
HOXC11-202ENST00000546378 NCOA7Q8NI08 942 aa16.78■□□□□ 0.28
HOXC11-202ENST00000546378 PARD6BQ9BYG5 372 aa16.78■□□□□ 0.28
HOXC11-202ENST00000546378 LCMT1Q9UIC8 334 aa16.78■□□□□ 0.28
HOXC11-202ENST00000546378 COL18A1P39060 1754 aa16.78■□□□□ 0.28
HOXC11-202ENST00000546378 ABL1P00519 1130 aa16.78■□□□□ 0.28
HOXC11-202ENST00000546378 ENOX2Q16206 610 aaKnown RBP16.78■□□□□ 0.28
HOXC11-202ENST00000546378 NAA16Q6N069 864 aaPredicted RBP16.78■□□□□ 0.28
HOXC11-202ENST00000546378 ACRBPQ8NEB7 543 aa16.78■□□□□ 0.28
HOXC11-202ENST00000546378 MED23Q9ULK4 1368 aa16.77■□□□□ 0.28
HOXC11-202ENST00000546378 PTF1AQ7RTS3 328 aa16.77■□□□□ 0.28
HOXC11-202ENST00000546378 PPFIBP1Q86W92 1011 aa16.77■□□□□ 0.28
HOXC11-202ENST00000546378 GSPT2Q8IYD1 628 aaKnown RBP16.77■□□□□ 0.28
HOXC11-202ENST00000546378 CALCOCO1Q9P1Z2 691 aa16.77■□□□□ 0.28
HOXC11-202ENST00000546378 DHX16O60231 1041 aaKnown RBP16.77■□□□□ 0.27
HOXC11-202ENST00000546378 FMR1Q06787 632 aaKnown RBP eCLIP16.77■□□□□ 0.27
HOXC11-202ENST00000546378 SHC4Q6S5L8 630 aa16.77■□□□□ 0.27
HOXC11-202ENST00000546378 AIDAQ96BJ3 306 aa16.77■□□□□ 0.27
HOXC11-202ENST00000546378 GUCA1BQ9UMX6 200 aa16.77■□□□□ 0.27
HOXC11-202ENST00000546378 PRKAB2O43741 272 aa16.76■□□□□ 0.27
HOXC11-202ENST00000546378 HMGB1P09429 215 aaKnown RBP16.76■□□□□ 0.27
HOXC11-202ENST00000546378 TDO2P48775 406 aa16.76■□□□□ 0.27
HOXC11-202ENST00000546378 SLC4A9Q96Q91 983 aa16.76■□□□□ 0.27
HOXC11-202ENST00000546378 CWC25Q9NXE8 425 aaPredicted RBP16.76■□□□□ 0.27
HOXC11-202ENST00000546378 ZPR1O75312 459 aa16.76■□□□□ 0.27
HOXC11-202ENST00000546378 KIF23Q02241 960 aaPredicted RBP16.76■□□□□ 0.27
HOXC11-202ENST00000546378 CYB5R4Q7L1T6 521 aa16.76■□□□□ 0.27
HOXC11-202ENST00000546378 FOXP4Q8IVH2 680 aaPredicted RBP16.76■□□□□ 0.27
HOXC11-202ENST00000546378 RAD51AP2Q09MP3 1159 aa16.75■□□□□ 0.27
HOXC11-202ENST00000546378 FOXR1Q6PIV2 292 aa16.75■□□□□ 0.27
HOXC11-202ENST00000546378 ARMT1Q9H993 441 aa16.75■□□□□ 0.27
HOXC11-202ENST00000546378 SLC12A7Q9Y666 1083 aa16.75■□□□□ 0.27
HOXC11-202ENST00000546378 LTBP4Q8N2S1 1624 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms