RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 SLC27A2O14975 620 aa20.32■□□□□ 0.84
CADM1-220ENST00000546000 TCP10Q12799 353 aa20.32■□□□□ 0.84
CADM1-220ENST00000546000 NECTIN1Q15223 517 aa20.32■□□□□ 0.84
CADM1-220ENST00000546000 RASEFQ8IZ41 740 aa20.32■□□□□ 0.84
CADM1-220ENST00000546000 STK11IPQ8N1F8 1099 aa20.32■□□□□ 0.84
CADM1-220ENST00000546000 TBC1D32Q96NH3 1257 aa20.32■□□□□ 0.84
CADM1-220ENST00000546000 NBPF3Q9H094 633 aa20.32■□□□□ 0.84
CADM1-220ENST00000546000 VEZTQ9HBM0 779 aa20.32■□□□□ 0.84
CADM1-220ENST00000546000 MKRN1Q9UHC7 482 aaKnown RBP20.32■□□□□ 0.84
CADM1-220ENST00000546000 CYP21A2P08686 494 aa20.31■□□□□ 0.84
CADM1-220ENST00000546000 HSPA4P34932 840 aa20.31■□□□□ 0.84
CADM1-220ENST00000546000 TBC1D10CQ8IV04 446 aa20.31■□□□□ 0.84
CADM1-220ENST00000546000 UPF2Q9HAU5 1272 aaKnown RBP20.31■□□□□ 0.84
CADM1-220ENST00000546000 TACC3Q9Y6A5 838 aa20.31■□□□□ 0.84
CADM1-220ENST00000546000 CNTNAP1P78357 1384 aa20.31■□□□□ 0.84
CADM1-220ENST00000546000 POTECB2RU33 542 aa20.3■□□□□ 0.84
CADM1-220ENST00000546000 SLURP2P0DP57 97 aa20.3■□□□□ 0.84
CADM1-220ENST00000546000 COL9A3Q14050 684 aaPredicted RBP20.3■□□□□ 0.84
CADM1-220ENST00000546000 ALX1Q15699 326 aa20.3■□□□□ 0.84
CADM1-220ENST00000546000 CTR9Q6PD62 1173 aa20.3■□□□□ 0.84
CADM1-220ENST00000546000 CDAN1Q8IWY9 1227 aa20.3■□□□□ 0.84
CADM1-220ENST00000546000 ZNF526Q8TF50 670 aaPredicted RBP20.3■□□□□ 0.84
CADM1-220ENST00000546000 TSHZ2Q9NRE2 1034 aa20.3■□□□□ 0.84
CADM1-220ENST00000546000 ATP8A2Q9NTI2 1148 aa20.3■□□□□ 0.84
CADM1-220ENST00000546000 MCM9Q9NXL9 1143 aa20.3■□□□□ 0.84
CADM1-220ENST00000546000 RPAP1Q9BWH6 1393 aaPredicted RBP20.3■□□□□ 0.84
CADM1-220ENST00000546000 SIPA1L1O43166 1804 aa20.3■□□□□ 0.84
CADM1-220ENST00000546000 ZMYM6O95789 1325 aa20.29■□□□□ 0.84
CADM1-220ENST00000546000 MYH1P12882 1939 aa20.29■□□□□ 0.84
CADM1-220ENST00000546000 MINDY4BA8MYZ0 360 aa20.29■□□□□ 0.84
CADM1-220ENST00000546000 USP17L12C9JPN9 530 aa20.29■□□□□ 0.84
CADM1-220ENST00000546000 USP17L21D6R901 530 aa20.29■□□□□ 0.84
CADM1-220ENST00000546000 CTDSPL2Q05D32 466 aa20.29■□□□□ 0.84
CADM1-220ENST00000546000 STOX1Q6ZVD7 989 aa20.29■□□□□ 0.84
CADM1-220ENST00000546000 CERS3Q8IU89 383 aa20.29■□□□□ 0.84
CADM1-220ENST00000546000 IDI2Q9BXS1 227 aa20.29■□□□□ 0.84
CADM1-220ENST00000546000 NACAP1Q9BZK3 213 aa20.29■□□□□ 0.84
CADM1-220ENST00000546000 OSBPL5Q9H0X9 879 aaPredicted RBP20.29■□□□□ 0.84
CADM1-220ENST00000546000 ADARB2Q9NS39 739 aaKnown RBP20.29■□□□□ 0.84
CADM1-220ENST00000546000 GGA3Q9NZ52 723 aa20.29■□□□□ 0.84
CADM1-220ENST00000546000 HACL1Q9UJ83 578 aa20.29■□□□□ 0.84
CADM1-220ENST00000546000 SNX14Q9Y5W7 946 aa20.29■□□□□ 0.84
CADM1-220ENST00000546000 EPHX2P34913 555 aa20.28■□□□□ 0.84
CADM1-220ENST00000546000 ANGEL2Q5VTE6 544 aaKnown RBP20.28■□□□□ 0.84
CADM1-220ENST00000546000 SH3BP5LQ7L8J4 393 aa20.28■□□□□ 0.84
CADM1-220ENST00000546000 NKX2-3Q8TAU0 364 aa20.28■□□□□ 0.84
CADM1-220ENST00000546000 INCENPQ9NQS7 918 aa20.28■□□□□ 0.84
CADM1-220ENST00000546000 TMOD2Q9NZR1 351 aa20.28■□□□□ 0.84
CADM1-220ENST00000546000 MCCP23508 829 aa20.27■□□□□ 0.84
CADM1-220ENST00000546000 RBM25P49756 843 aaKnown RBP20.27■□□□□ 0.84
CADM1-220ENST00000546000 PPARAQ07869 468 aa20.27■□□□□ 0.84
CADM1-220ENST00000546000 GIMAP6Q6P9H5 292 aa20.27■□□□□ 0.84
CADM1-220ENST00000546000 KIF2CQ99661 725 aa20.27■□□□□ 0.84
CADM1-220ENST00000546000 TAF1DQ9H5J8 278 aaPredicted RBP20.27■□□□□ 0.84
CADM1-220ENST00000546000 SCN4AP35499 1836 aa20.27■□□□□ 0.84
CADM1-220ENST00000546000 DDTLA6NHG4 134 aaPredicted RBP20.26■□□□□ 0.83
CADM1-220ENST00000546000 MYO1BO43795 1136 aa20.26■□□□□ 0.83
CADM1-220ENST00000546000 EIF5BO60841 1220 aaKnown RBP20.26■□□□□ 0.83
CADM1-220ENST00000546000 MMP14P50281 582 aa20.26■□□□□ 0.83
CADM1-220ENST00000546000 PLCD1P51178 756 aa20.26■□□□□ 0.83
CADM1-220ENST00000546000 IMMTQ16891 758 aaKnown RBP20.26■□□□□ 0.83
CADM1-220ENST00000546000 ADCK5Q3MIX3 580 aa20.26■□□□□ 0.83
CADM1-220ENST00000546000 KCNB2Q92953 911 aa20.26■□□□□ 0.83
CADM1-220ENST00000546000 DYNLL2Q96FJ2 89 aa20.26■□□□□ 0.83
CADM1-220ENST00000546000 ARPP21Q9UBL0 812 aaPredicted RBP20.26■□□□□ 0.83
CADM1-220ENST00000546000 CTNNA3Q9UI47 895 aa20.26■□□□□ 0.83
CADM1-220ENST00000546000 NEDD4P46934 1319 aa20.26■□□□□ 0.83
CADM1-220ENST00000546000 ZNF213O14771 459 aa20.25■□□□□ 0.83
CADM1-220ENST00000546000 EPB41L2O43491 1005 aaKnown RBP20.25■□□□□ 0.83
CADM1-220ENST00000546000 POLR3DP05423 398 aaPredicted RBP20.25■□□□□ 0.83
CADM1-220ENST00000546000 POTEIP0CG38 1075 aa20.25■□□□□ 0.83
CADM1-220ENST00000546000 POTEJP0CG39 1038 aa20.25■□□□□ 0.83
CADM1-220ENST00000546000 CPA1P15085 419 aa20.25■□□□□ 0.83
CADM1-220ENST00000546000 EAPPQ56P03 285 aaPredicted RBP20.25■□□□□ 0.83
CADM1-220ENST00000546000 SLC44A5Q8NCS7 719 aa20.25■□□□□ 0.83
CADM1-220ENST00000546000 DDRGK1Q96HY6 314 aa20.25■□□□□ 0.83
CADM1-220ENST00000546000 TMEM39BQ9GZU3 492 aa20.25■□□□□ 0.83
CADM1-220ENST00000546000 NMRK2Q9NPI5 230 aa20.25■□□□□ 0.83
CADM1-220ENST00000546000 FAM196BA6NMK8 535 aa20.24■□□□□ 0.83
CADM1-220ENST00000546000 SBK1Q52WX2 424 aa20.24■□□□□ 0.83
CADM1-220ENST00000546000 C12orf60Q5U649 245 aa20.24■□□□□ 0.83
CADM1-220ENST00000546000 DLK2Q6UY11 383 aa20.24■□□□□ 0.83
CADM1-220ENST00000546000 RRAGCQ9HB90 399 aa20.24■□□□□ 0.83
CADM1-220ENST00000546000 E7EWF7 191 aa20.23■□□□□ 0.83
CADM1-220ENST00000546000 ENTPD3O75355 529 aa20.23■□□□□ 0.83
CADM1-220ENST00000546000 ZSCAN29Q8IWY8 852 aaPredicted RBP20.23■□□□□ 0.83
CADM1-220ENST00000546000 JAKMIP1Q96N16 626 aaKnown RBP20.23■□□□□ 0.83
CADM1-220ENST00000546000 ROBO3Q96MS0 1386 aa20.22■□□□□ 0.83
CADM1-220ENST00000546000 IQCA1LA6NCM1 817 aa20.22■□□□□ 0.83
CADM1-220ENST00000546000 ADM5C9JUS6 153 aa20.22■□□□□ 0.83
CADM1-220ENST00000546000 PRDM1O75626 825 aa20.22■□□□□ 0.83
CADM1-220ENST00000546000 RASA3Q14644 834 aa20.22■□□□□ 0.83
CADM1-220ENST00000546000 RNF20Q5VTR2 975 aa20.22■□□□□ 0.83
CADM1-220ENST00000546000 PRAMEF18Q5VWM3 479 aa20.22■□□□□ 0.83
CADM1-220ENST00000546000 COL2A1P02458 1487 aaPredicted RBP20.22■□□□□ 0.83
CADM1-220ENST00000546000 ATRNL1Q5VV63 1379 aa20.21■□□□□ 0.83
CADM1-220ENST00000546000 NPM3O75607 178 aaKnown RBP20.21■□□□□ 0.83
CADM1-220ENST00000546000 USP50Q70EL3 339 aaPredicted RBP20.21■□□□□ 0.83
CADM1-220ENST00000546000 FAM151AQ8WW52 585 aa20.21■□□□□ 0.83
CADM1-220ENST00000546000 UPF3BQ9BZI7 483 aaKnown RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms