RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 MTRF1LQ9UGC7 380 aaKnown RBP14.07□□□□□ -0.16
COL4A6-209ENST00000545689 ARHGAP6O43182 974 aa14.07□□□□□ -0.16
COL4A6-209ENST00000545689 ZNF202O95125 648 aa14.07□□□□□ -0.16
COL4A6-209ENST00000545689 PAK1Q13153 545 aa14.07□□□□□ -0.16
COL4A6-209ENST00000545689 CEP128Q6ZU80 1094 aa14.07□□□□□ -0.16
COL4A6-209ENST00000545689 WDR66Q8TBY9 1149 aa14.07□□□□□ -0.16
COL4A6-209ENST00000545689 TMTC1Q8IUR5 882 aa14.07□□□□□ -0.16
COL4A6-209ENST00000545689 EPB41P11171 864 aaKnown RBP14.07□□□□□ -0.16
COL4A6-209ENST00000545689 TTLL12Q14166 644 aaPredicted RBP14.07□□□□□ -0.16
COL4A6-209ENST00000545689 SYNCQ9H7C4 482 aa14.07□□□□□ -0.16
COL4A6-209ENST00000545689 CDC37L1Q7L3B6 337 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 RNF216Q9NWF9 866 aaPredicted RBP14.06□□□□□ -0.16
COL4A6-209ENST00000545689 STAP2Q9UGK3 403 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 EVCP57679 992 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 WDR78Q5VTH9 848 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 MTUS1Q9ULD2 1270 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 CAPN2P17655 700 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 KRT40Q6A162 431 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 TEX11Q8IYF3 940 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 ZSWIM6Q9HCJ5 1215 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 E7EWF7 191 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 FCHSD1Q86WN1 690 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 SPATA5Q8NB90 893 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 JAKMIP2Q96AA8 810 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 MLH3Q9UHC1 1453 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 ZNF521Q96K83 1311 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 PDE4DQ08499 809 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 CLUL1Q15846 466 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 CCDC51Q96ER9 411 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 OSBPL3Q9H4L5 887 aa14.06□□□□□ -0.16
COL4A6-209ENST00000545689 CALUO43852 315 aaPredicted RBP14.05□□□□□ -0.16
COL4A6-209ENST00000545689 CCDC26Q8TAB7 109 aa14.05□□□□□ -0.16
COL4A6-209ENST00000545689 UBE2Q2Q8WVN8 375 aa14.05□□□□□ -0.16
COL4A6-209ENST00000545689 F8W031 263 aaPredicted RBP14.05□□□□□ -0.16
COL4A6-209ENST00000545689 ZKSCAN3Q9BRR0 538 aa14.05□□□□□ -0.16
COL4A6-209ENST00000545689 FRMD4BQ9Y2L6 1034 aa14.05□□□□□ -0.16
COL4A6-209ENST00000545689 TBC1D8BQ0IIM8 1120 aa14.05□□□□□ -0.16
COL4A6-209ENST00000545689 POSTNQ15063 836 aa14.05□□□□□ -0.16
COL4A6-209ENST00000545689 ADALQ6DHV7 355 aa14.05□□□□□ -0.16
COL4A6-209ENST00000545689 SMAP1Q8IYB5 467 aaPredicted RBP14.05□□□□□ -0.16
COL4A6-209ENST00000545689 LETM2Q2VYF4 491 aa14.05□□□□□ -0.16
COL4A6-209ENST00000545689 PIK3AP1Q6ZUJ8 805 aa14.05□□□□□ -0.16
COL4A6-209ENST00000545689 FAM76AQ8TAV0 307 aa14.05□□□□□ -0.16
COL4A6-209ENST00000545689 CAPZA3Q96KX2 299 aa14.05□□□□□ -0.16
COL4A6-209ENST00000545689 NSFL1CQ9UNZ2 370 aaKnown RBP14.05□□□□□ -0.16
COL4A6-209ENST00000545689 PARP3Q9Y6F1 533 aa14.05□□□□□ -0.16
COL4A6-209ENST00000545689 KDM6BO15054 1643 aa14.05□□□□□ -0.16
COL4A6-209ENST00000545689 KIF1BO60333 1816 aa14.05□□□□□ -0.16
COL4A6-209ENST00000545689 USP44Q9H0E7 712 aa14.05□□□□□ -0.16
COL4A6-209ENST00000545689 EBAG9O00559 213 aa14.04□□□□□ -0.16
COL4A6-209ENST00000545689 PFKFB2O60825 505 aa14.04□□□□□ -0.16
COL4A6-209ENST00000545689 IQCGQ9H095 443 aaKnown RBP14.04□□□□□ -0.16
COL4A6-209ENST00000545689 NCOA5Q9HCD5 579 aaKnown RBP14.04□□□□□ -0.16
COL4A6-209ENST00000545689 CCDC87Q9NVE4 849 aa14.04□□□□□ -0.16
COL4A6-209ENST00000545689 RSPH14Q9UHP6 348 aa14.04□□□□□ -0.16
COL4A6-209ENST00000545689 VPS18Q9P253 973 aa14.04□□□□□ -0.16
COL4A6-209ENST00000545689 TSKSQ9UJT2 592 aa14.04□□□□□ -0.16
COL4A6-209ENST00000545689 EFCAB6Q5THR3 1501 aa14.04□□□□□ -0.16
COL4A6-209ENST00000545689 GADD45BO75293 160 aaPredicted RBP14.04□□□□□ -0.16
COL4A6-209ENST00000545689 PPP1R9BQ96SB3 815 aa14.04□□□□□ -0.16
COL4A6-209ENST00000545689 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL4A6-209ENST00000545689 POLR2DO15514 142 aaKnown RBP14.04□□□□□ -0.16
COL4A6-209ENST00000545689 GIGYF1O75420 1035 aaPredicted RBP14.04□□□□□ -0.16
COL4A6-209ENST00000545689 NONOQ15233 471 aaKnown RBP eCLIP14.04□□□□□ -0.16
COL4A6-209ENST00000545689 TRAPPC3LQ5T215 181 aa14.04□□□□□ -0.16
COL4A6-209ENST00000545689 V9GY48 417 aaPredicted RBP14.04□□□□□ -0.16
COL4A6-209ENST00000545689 CCT6AP40227 531 aaKnown RBP14.04□□□□□ -0.16
COL4A6-209ENST00000545689 SEL1L2Q5TEA6 688 aa14.04□□□□□ -0.16
COL4A6-209ENST00000545689 ME3Q16798 604 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 CCDC121Q6ZUS5 278 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 KLHDC4Q8TBB5 520 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 NUCKS1Q9H1E3 243 aaKnown RBP14.03□□□□□ -0.16
COL4A6-209ENST00000545689 BEND3Q5T5X7 828 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 CFAP58Q5T655 872 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 PPP1R14CQ8TAE6 165 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 ZHX1Q9UKY1 873 aaPredicted RBP14.03□□□□□ -0.16
COL4A6-209ENST00000545689 TRAF5O00463 557 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 RHOXF2BP0C7M4 288 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 CNBD1Q8NA66 436 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 ATRIPQ8WXE1 791 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 HAUS7Q99871 368 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 RHOXF2Q9BQY4 288 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 ATP5DP30049 168 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 ARID5AQ03989 594 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 CROCCP2Q86T23 111 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 KIFAP3Q92845 792 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 CEP83Q9Y592 693 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 CSGALNACT2Q8N6G5 542 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 RRAGDQ9NQL2 400 aaPredicted RBP14.03□□□□□ -0.16
COL4A6-209ENST00000545689 ZNF532Q9HCE3 1301 aa14.03□□□□□ -0.16
COL4A6-209ENST00000545689 PLEKHG1Q9ULL1 1385 aa14.02□□□□□ -0.16
COL4A6-209ENST00000545689 CHMP4BP1P59074 171 aa14.02□□□□□ -0.16
COL4A6-209ENST00000545689 TCIRG1Q13488 830 aa14.02□□□□□ -0.16
COL4A6-209ENST00000545689 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.02□□□□□ -0.16
COL4A6-209ENST00000545689 BTG4Q9NY30 223 aa14.02□□□□□ -0.16
COL4A6-209ENST00000545689 ARPP21Q9UBL0 812 aaPredicted RBP14.02□□□□□ -0.16
COL4A6-209ENST00000545689 GPR108Q9NPR9 543 aa14.02□□□□□ -0.16
COL4A6-209ENST00000545689 TMEM63CQ9P1W3 806 aa14.02□□□□□ -0.16
COL4A6-209ENST00000545689 FERP16591 822 aa14.02□□□□□ -0.17
COL4A6-209ENST00000545689 MSL1Q68DK7 614 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms