RNA–Protein interactions for RNA: ENST00000545621.5

HMBS-222, Transcript of hydroxymethylbilane synthase, human

TSL 1 (best)

Gene HMBS, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMBS-222	ENST00000545621	HOOK2	Q96ED9	719 aa		19.43	■□□□□ 0.7
HMBS-222	ENST00000545621	AATF	Q9NY61	560 aa	Known RBP eCLIP	19.43	■□□□□ 0.7
HMBS-222	ENST00000545621	PDE6A	P16499	860 aa		19.42	■□□□□ 0.7
HMBS-222	ENST00000545621	MX1	P20591	662 aa		19.42	■□□□□ 0.7
HMBS-222	ENST00000545621	ZNF157	P51786	506 aa	Predicted RBP	19.42	■□□□□ 0.7
HMBS-222	ENST00000545621	MAP3K10	Q02779	954 aa		19.42	■□□□□ 0.7
HMBS-222	ENST00000545621	NOG	Q13253	232 aa		19.42	■□□□□ 0.7
HMBS-222	ENST00000545621	PRKG1	Q13976	671 aa		19.42	■□□□□ 0.7
HMBS-222	ENST00000545621	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	19.42	■□□□□ 0.7
HMBS-222	ENST00000545621	SH3BP5L	Q7L8J4	393 aa		19.42	■□□□□ 0.7
HMBS-222	ENST00000545621	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	19.42	■□□□□ 0.7
HMBS-222	ENST00000545621	NOL10	Q9BSC4	688 aa	Known RBP	19.42	■□□□□ 0.7
HMBS-222	ENST00000545621	STAP2	Q9UGK3	403 aa		19.42	■□□□□ 0.7
HMBS-222	ENST00000545621	IREB2	P48200	963 aa	Known RBP	19.41	■□□□□ 0.7
HMBS-222	ENST00000545621	SLC9C2	Q5TAH2	1124 aa		19.41	■□□□□ 0.7
HMBS-222	ENST00000545621	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	19.41	■□□□□ 0.7
HMBS-222	ENST00000545621	ERC2	O15083	957 aa		19.4	■□□□□ 0.7
HMBS-222	ENST00000545621	AOC2	O75106	756 aa		19.4	■□□□□ 0.7
HMBS-222	ENST00000545621	GLRX3	O76003	335 aa	Known RBP	19.4	■□□□□ 0.7
HMBS-222	ENST00000545621	ADD2	P35612	726 aa		19.4	■□□□□ 0.7
HMBS-222	ENST00000545621	NUCB1	Q02818	461 aa		19.4	■□□□□ 0.7
HMBS-222	ENST00000545621	TSHZ3	Q63HK5	1081 aa		19.4	■□□□□ 0.7
HMBS-222	ENST00000545621	TEX11	Q8IYF3	940 aa		19.4	■□□□□ 0.7
HMBS-222	ENST00000545621	ANKRD13A	Q8IZ07	590 aa		19.4	■□□□□ 0.7
HMBS-222	ENST00000545621	RIOK1	Q9BRS2	568 aa	Known RBP	19.4	■□□□□ 0.7
HMBS-222	ENST00000545621	OSBPL5	Q9H0X9	879 aa	Predicted RBP	19.4	■□□□□ 0.7
HMBS-222	ENST00000545621	WBP1L	Q9NX94	342 aa		19.4	■□□□□ 0.7
HMBS-222	ENST00000545621	DDTL	A6NHG4	134 aa	Predicted RBP	19.39	■□□□□ 0.69
HMBS-222	ENST00000545621	DYNLL1	P63167	89 aa	Known RBP	19.39	■□□□□ 0.69
HMBS-222	ENST00000545621	DCAF15	Q66K64	600 aa		19.39	■□□□□ 0.69
HMBS-222	ENST00000545621	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	19.39	■□□□□ 0.69
HMBS-222	ENST00000545621	KBTBD3	Q8NAB2	608 aa		19.39	■□□□□ 0.69
HMBS-222	ENST00000545621	ZIC5	Q96T25	663 aa		19.39	■□□□□ 0.69
HMBS-222	ENST00000545621	ZBTB47	Q9UFB7	747 aa	Predicted RBP	19.39	■□□□□ 0.69
HMBS-222	ENST00000545621	ZNF112	Q9UJU3	913 aa		19.39	■□□□□ 0.69
HMBS-222	ENST00000545621	ZNF532	Q9HCE3	1301 aa		19.39	■□□□□ 0.69
HMBS-222	ENST00000545621	PDE1A	P54750	535 aa		19.38	■□□□□ 0.69
HMBS-222	ENST00000545621	PICALM	Q13492	652 aa		19.38	■□□□□ 0.69
HMBS-222	ENST00000545621	UBE3C	Q15386	1083 aa		19.38	■□□□□ 0.69
HMBS-222	ENST00000545621	CHD1L	Q86WJ1	897 aa		19.38	■□□□□ 0.69
HMBS-222	ENST00000545621	MIGA1	Q8NAN2	632 aa		19.38	■□□□□ 0.69
HMBS-222	ENST00000545621	CLMN	Q96JQ2	1002 aa		19.38	■□□□□ 0.69
HMBS-222	ENST00000545621	CSRNP1	Q96S65	589 aa		19.38	■□□□□ 0.69
HMBS-222	ENST00000545621	LNPK	Q9C0E8	428 aa		19.38	■□□□□ 0.69
HMBS-222	ENST00000545621	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	19.38	■□□□□ 0.69	2e-7	■■■■□ 19.4
HMBS-222	ENST00000545621	FLT1	P17948	1338 aa		19.37	■□□□□ 0.69
HMBS-222	ENST00000545621	TBC1D12	O60347	775 aa		19.37	■□□□□ 0.69
HMBS-222	ENST00000545621	MAP3K9	P80192	1104 aa		19.37	■□□□□ 0.69
HMBS-222	ENST00000545621	MAP2K1	Q02750	393 aa	Predicted RBP	19.37	■□□□□ 0.69
HMBS-222	ENST00000545621	GRM1	Q13255	1194 aa		19.37	■□□□□ 0.69
HMBS-222	ENST00000545621	ZNF341	Q9BYN7	854 aa		19.37	■□□□□ 0.69
HMBS-222	ENST00000545621	ZBTB48	P10074	688 aa	Predicted RBP	19.36	■□□□□ 0.69
HMBS-222	ENST00000545621	SPRYD7	Q5W111	196 aa		19.36	■□□□□ 0.69
HMBS-222	ENST00000545621	MIGA2	Q7L4E1	593 aa		19.36	■□□□□ 0.69
HMBS-222	ENST00000545621	TGFBRAP1	Q8WUH2	860 aa		19.36	■□□□□ 0.69
HMBS-222	ENST00000545621	SLC10A4	Q96EP9	437 aa		19.36	■□□□□ 0.69
HMBS-222	ENST00000545621	CASP8AP2	Q9UKL3	1982 aa		19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	MAGEB6P1	A0A0J9YX57	407 aa		19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	PHF20L1	A8MW92	1017 aa		19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	CHGB	P05060	677 aa		19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	HSPA1A	P0DMV8	641 aa	Known RBP	19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	HSPA1B	P0DMV9	641 aa	Known RBP	19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	KIF23	Q02241	960 aa	Predicted RBP	19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	VGLL4	Q14135	290 aa		19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	B4GALNT3	Q6L9W6	998 aa		19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	ZSCAN25	Q6NSZ9	544 aa		19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	METTL16	Q86W50	562 aa	Known RBP	19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	REM2	Q8IYK8	340 aa	Predicted RBP	19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	WNK4	Q96J92	1243 aa		19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	WRNIP1	Q96S55	665 aa		19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	DHX36	Q9H2U1	1008 aa	Known RBP	19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	OSBPL3	Q9H4L5	887 aa		19.35	■□□□□ 0.69
HMBS-222	ENST00000545621	SLFNL1	Q499Z3	407 aa		19.34	■□□□□ 0.69
HMBS-222	ENST00000545621	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	19.34	■□□□□ 0.69
HMBS-222	ENST00000545621	SNCAIP	Q9Y6H5	919 aa		19.34	■□□□□ 0.69
HMBS-222	ENST00000545621	GJA5	P36382	358 aa		19.33	■□□□□ 0.68
HMBS-222	ENST00000545621	NOL9	Q5SY16	702 aa	Known RBP	19.33	■□□□□ 0.68
HMBS-222	ENST00000545621	MAPKAPK5	Q8IW41	473 aa		19.33	■□□□□ 0.68
HMBS-222	ENST00000545621	PLEKHM2	Q8IWE5	1019 aa		19.33	■□□□□ 0.68
HMBS-222	ENST00000545621	PI4KB	Q9UBF8	816 aa		19.33	■□□□□ 0.68
HMBS-222	ENST00000545621	CSAD	Q9Y600	493 aa		19.33	■□□□□ 0.68
HMBS-222	ENST00000545621	SPDYE5	A6NIY4	337 aa		19.32	■□□□□ 0.68
HMBS-222	ENST00000545621	ZFY	P08048	801 aa	Predicted RBP	19.32	■□□□□ 0.68
HMBS-222	ENST00000545621	INPP5B	P32019	993 aa		19.32	■□□□□ 0.68
HMBS-222	ENST00000545621	TM4SF4	P48230	202 aa		19.32	■□□□□ 0.68
HMBS-222	ENST00000545621	LCORL	Q8N3X6	602 aa		19.32	■□□□□ 0.68
HMBS-222	ENST00000545621	ZKSCAN4	Q969J2	545 aa	Predicted RBP	19.32	■□□□□ 0.68
HMBS-222	ENST00000545621	HERC5	Q9UII4	1024 aa	Known RBP	19.32	■□□□□ 0.68
HMBS-222	ENST00000545621	SLURP2	P0DP57	97 aa		19.31	■□□□□ 0.68
HMBS-222	ENST00000545621	TICAM2	Q86XR7	235 aa		19.31	■□□□□ 0.68
HMBS-222	ENST00000545621	ERO1B	Q86YB8	467 aa		19.31	■□□□□ 0.68
HMBS-222	ENST00000545621	OPTN	Q96CV9	577 aa		19.31	■□□□□ 0.68
HMBS-222	ENST00000545621	CRNKL1	Q9BZJ0	848 aa	Known RBP	19.31	■□□□□ 0.68
HMBS-222	ENST00000545621	PUS7L	Q9H0K6	701 aa	Known RBP	19.31	■□□□□ 0.68
HMBS-222	ENST00000545621	ELP3	Q9H9T3	547 aa		19.31	■□□□□ 0.68
HMBS-222	ENST00000545621	LOC285556	D6RIA3	1793 aa		19.3	■□□□□ 0.68
HMBS-222	ENST00000545621	FOXN1	O15353	648 aa		19.3	■□□□□ 0.68
HMBS-222	ENST00000545621	RNF113A	O15541	343 aa	Known RBP	19.3	■□□□□ 0.68
HMBS-222	ENST00000545621	MBD4	O95243	580 aa		19.3	■□□□□ 0.68
HMBS-222	ENST00000545621	APPBP2	Q92624	585 aa		19.3	■□□□□ 0.68

Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms