RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 ARAP2Q8WZ64 1704 aa9.23□□□□□ -0.93
COPA-207ENST00000545284 PHF20L1A8MW92 1017 aa9.23□□□□□ -0.93
COPA-207ENST00000545284 PLIN1O60240 522 aa9.23□□□□□ -0.93
COPA-207ENST00000545284 CTNND1O60716 968 aaKnown RBP9.23□□□□□ -0.93
COPA-207ENST00000545284 SLC4A2P04920 1241 aa9.23□□□□□ -0.93
COPA-207ENST00000545284 SMAD3P84022 425 aaKnown RBP9.23□□□□□ -0.93
COPA-207ENST00000545284 MDM2Q00987 491 aaPredicted RBP9.23□□□□□ -0.93
COPA-207ENST00000545284 LMBR1LQ6UX01 489 aa9.23□□□□□ -0.93
COPA-207ENST00000545284 ANKRD13CQ8N6S4 541 aa9.23□□□□□ -0.93
COPA-207ENST00000545284 PROCA1Q8NCQ7 364 aaPredicted RBP9.23□□□□□ -0.93
COPA-207ENST00000545284 PRKAG2Q9UGJ0 569 aa9.23□□□□□ -0.93
COPA-207ENST00000545284 HOXD11P31277 338 aaPredicted RBP9.22□□□□□ -0.93
COPA-207ENST00000545284 FLIIQ13045 1269 aa9.22□□□□□ -0.93
COPA-207ENST00000545284 GRIK5Q16478 980 aa9.22□□□□□ -0.93
COPA-207ENST00000545284 GADL1Q6ZQY3 521 aa9.22□□□□□ -0.93
COPA-207ENST00000545284 WDR66Q8TBY9 1149 aa9.22□□□□□ -0.93
COPA-207ENST00000545284 ADAMTS8Q9UP79 889 aa9.22□□□□□ -0.93
COPA-207ENST00000545284 CHMP3Q9Y3E7 222 aa9.22□□□□□ -0.93
COPA-207ENST00000545284 MYH3P11055 1940 aa9.22□□□□□ -0.93
COPA-207ENST00000545284 MUC3AQ02505 3323 aa9.22□□□□□ -0.93
COPA-207ENST00000545284 LRRC26Q2I0M4 334 aa9.21□□□□□ -0.94
COPA-207ENST00000545284 TSPYL6Q8N831 410 aa9.21□□□□□ -0.94
COPA-207ENST00000545284 SOCS4Q8WXH5 440 aa9.21□□□□□ -0.94
COPA-207ENST00000545284 FAM161BQ96MY7 647 aa9.21□□□□□ -0.94
COPA-207ENST00000545284 TTC28Q96AY4 2481 aa9.21□□□□□ -0.94
COPA-207ENST00000545284 MSCO60682 206 aa9.2□□□□□ -0.94
COPA-207ENST00000545284 ENTPD3O75355 529 aa9.2□□□□□ -0.94
COPA-207ENST00000545284 PRKAR2AP13861 404 aaKnown RBP9.2□□□□□ -0.94
COPA-207ENST00000545284 FOSL2P15408 326 aa9.2□□□□□ -0.94
COPA-207ENST00000545284 CHAF1AQ13111 956 aaPredicted RBP9.2□□□□□ -0.94
COPA-207ENST00000545284 FKBP5Q13451 457 aaPredicted RBP9.2□□□□□ -0.94
COPA-207ENST00000545284 LHX8Q68G74 356 aa9.2□□□□□ -0.94
COPA-207ENST00000545284 CDC42EP5Q6NZY7 148 aa9.2□□□□□ -0.94
COPA-207ENST00000545284 ATXN2LQ8WWM7 1075 aaKnown RBP9.2□□□□□ -0.94
COPA-207ENST00000545284 TRIB2Q92519 343 aa9.2□□□□□ -0.94
COPA-207ENST00000545284 ZNF594Q96JF6 807 aaPredicted RBP9.2□□□□□ -0.94
COPA-207ENST00000545284 NUDT12Q9BQG2 462 aa9.2□□□□□ -0.94
COPA-207ENST00000545284 IDI2Q9BXS1 227 aa9.2□□□□□ -0.94
COPA-207ENST00000545284 MORF4L1Q9UBU8 362 aa9.2□□□□□ -0.94
COPA-207ENST00000545284 LRRFIP2Q9Y608 721 aaKnown RBP9.2□□□□□ -0.94
COPA-207ENST00000545284 MYBBP1AQ9BQG0 1328 aaKnown RBP9.2□□□□□ -0.94
COPA-207ENST00000545284 GRM8O00222 908 aa9.19□□□□□ -0.94
COPA-207ENST00000545284 ZBTB22O15209 634 aa9.19□□□□□ -0.94
COPA-207ENST00000545284 TBC1D12O60347 775 aa9.19□□□□□ -0.94
COPA-207ENST00000545284 PDE8BO95263 885 aa9.19□□□□□ -0.94
COPA-207ENST00000545284 TCP10Q12799 353 aa9.19□□□□□ -0.94
COPA-207ENST00000545284 TWISTNBQ3B726 338 aaPredicted RBP9.19□□□□□ -0.94
COPA-207ENST00000545284 BEND3Q5T5X7 828 aa9.19□□□□□ -0.94
COPA-207ENST00000545284 G2E3Q7L622 706 aa9.19□□□□□ -0.94
COPA-207ENST00000545284 FAM198AQ9UFP1 575 aa9.19□□□□□ -0.94
COPA-207ENST00000545284 SYNGAP1Q96PV0 1343 aa9.19□□□□□ -0.94
COPA-207ENST00000545284 ATRNL1Q5VV63 1379 aa9.19□□□□□ -0.94
COPA-207ENST00000545284 TRIM75PA6NK02 468 aa9.18□□□□□ -0.94
COPA-207ENST00000545284 APAF1O14727 1248 aa9.18□□□□□ -0.94
COPA-207ENST00000545284 IFIT1P09914 478 aaKnown RBP9.18□□□□□ -0.94
COPA-207ENST00000545284 MAPK4P31152 587 aa9.18□□□□□ -0.94
COPA-207ENST00000545284 NFIAQ12857 509 aa9.18□□□□□ -0.94
COPA-207ENST00000545284 TRIM32Q13049 653 aa9.18□□□□□ -0.94
COPA-207ENST00000545284 SH3D19Q5HYK7 790 aa9.18□□□□□ -0.94
COPA-207ENST00000545284 GTF3C2Q8WUA4 911 aaPredicted RBP9.18□□□□□ -0.94
COPA-207ENST00000545284 MYLIPQ8WY64 445 aa9.18□□□□□ -0.94
COPA-207ENST00000545284 C1QTNF1Q9BXJ1 281 aa9.18□□□□□ -0.94
COPA-207ENST00000545284 USP40Q9NVE5 1235 aa9.18□□□□□ -0.94
COPA-207ENST00000545284 IQSEC3Q9UPP2 1182 aaPredicted RBP9.18□□□□□ -0.94
COPA-207ENST00000545284 DAGLAQ9Y4D2 1042 aa9.18□□□□□ -0.94
COPA-207ENST00000545284 ALPK3Q96L96 1907 aa9.17□□□□□ -0.94
COPA-207ENST00000545284 SPEF2Q9C093 1822 aa9.17□□□□□ -0.94
COPA-207ENST00000545284 NPM3O75607 178 aaKnown RBP9.17□□□□□ -0.94
COPA-207ENST00000545284 ALDH1L1O75891 902 aa9.17□□□□□ -0.94
COPA-207ENST00000545284 ZKSCAN1P17029 563 aaPredicted RBP9.17□□□□□ -0.94
COPA-207ENST00000545284 CYP2B6P20813 491 aa9.17□□□□□ -0.94
COPA-207ENST00000545284 HOXA7P31268 230 aaPredicted RBP9.17□□□□□ -0.94
COPA-207ENST00000545284 ZEB1P37275 1124 aaPredicted RBP9.17□□□□□ -0.94
COPA-207ENST00000545284 CACNB2Q08289 660 aaPredicted RBP9.17□□□□□ -0.94
COPA-207ENST00000545284 PDE3AQ14432 1141 aa9.17□□□□□ -0.94
COPA-207ENST00000545284 SHHQ15465 462 aa9.17□□□□□ -0.94
COPA-207ENST00000545284 EPHA10Q5JZY3 1008 aa9.17□□□□□ -0.94
COPA-207ENST00000545284 TREML2Q5T2D2 321 aa9.17□□□□□ -0.94
COPA-207ENST00000545284 VGLL2Q8N8G2 317 aa9.17□□□□□ -0.94
COPA-207ENST00000545284 ZNF280CQ8ND82 737 aa9.17□□□□□ -0.94
COPA-207ENST00000545284 USP6NLQ92738 828 aa9.17□□□□□ -0.94
COPA-207ENST00000545284 SENP6Q9GZR1 1112 aaPredicted RBP9.17□□□□□ -0.94
COPA-207ENST00000545284 OSBPL5Q9H0X9 879 aaPredicted RBP9.17□□□□□ -0.94
COPA-207ENST00000545284 TTYH1Q9H313 450 aaPredicted RBP9.17□□□□□ -0.94
COPA-207ENST00000545284 C9orf78Q9NZ63 289 aaPredicted RBP9.17□□□□□ -0.94
COPA-207ENST00000545284 SALL1Q9NSC2 1324 aa9.16□□□□□ -0.94
COPA-207ENST00000545284 DNM1LO00429 736 aa9.16□□□□□ -0.94
COPA-207ENST00000545284 RGS2P41220 211 aa9.16□□□□□ -0.94
COPA-207ENST00000545284 MAP3K12Q12852 859 aa9.16□□□□□ -0.94
COPA-207ENST00000545284 PUM3Q15397 648 aaKnown RBP9.16□□□□□ -0.94
COPA-207ENST00000545284 CCDC27Q2M243 656 aa9.16□□□□□ -0.94
COPA-207ENST00000545284 NCBP3Q53F19 620 aaKnown RBP9.16□□□□□ -0.94
COPA-207ENST00000545284 METTL24Q5JXM2 366 aa9.16□□□□□ -0.94
COPA-207ENST00000545284 C1orf53Q5VUE5 145 aa9.16□□□□□ -0.94
COPA-207ENST00000545284 SLF2Q8IX21 1173 aa9.16□□□□□ -0.94
COPA-207ENST00000545284 GPRC5AQ8NFJ5 357 aa9.16□□□□□ -0.94
COPA-207ENST00000545284 LPAR1Q92633 364 aa9.16□□□□□ -0.94
COPA-207ENST00000545284 FAM163AQ96GL9 167 aaPredicted RBP9.16□□□□□ -0.94
COPA-207ENST00000545284 PUS3Q9BZE2 481 aaKnown RBP9.16□□□□□ -0.94
COPA-207ENST00000545284 ASCC2Q9H1I8 757 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms