RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 LRRFIP1Q32MZ4 808 aaKnown RBP11.58□□□□□ -0.56
CIT-216ENST00000544872 DZIP1Q86YF9 867 aaKnown RBP11.58□□□□□ -0.56
CIT-216ENST00000544872 KIAA0825Q8IV33 1275 aa11.58□□□□□ -0.56
CIT-216ENST00000544872 SIRT2Q8IXJ6 389 aa11.58□□□□□ -0.56
CIT-216ENST00000544872 CCDC8Q9H0W5 538 aaPredicted RBP11.58□□□□□ -0.56
CIT-216ENST00000544872 IL1RAPL2Q9NP60 686 aa11.58□□□□□ -0.56
CIT-216ENST00000544872 KCNQ5Q9NR82 932 aa11.58□□□□□ -0.56
CIT-216ENST00000544872 TMOD2Q9NZR1 351 aa11.58□□□□□ -0.56
CIT-216ENST00000544872 LRP2BPQ9P2M1 347 aa11.58□□□□□ -0.56
CIT-216ENST00000544872 ABCF2Q9UG63 623 aa11.58□□□□□ -0.56
CIT-216ENST00000544872 TTF2Q9UNY4 1162 aaKnown RBP11.58□□□□□ -0.56
CIT-216ENST00000544872 PCDHB15Q9Y5E8 787 aa11.58□□□□□ -0.56
CIT-216ENST00000544872 LAMB2P55268 1798 aa11.58□□□□□ -0.56
CIT-216ENST00000544872 NCOR1O75376 2440 aa11.58□□□□□ -0.56
CIT-216ENST00000544872 F8W031 263 aaPredicted RBP11.57□□□□□ -0.56
CIT-216ENST00000544872 ERC2O15083 957 aa11.57□□□□□ -0.56
CIT-216ENST00000544872 LDHCP07864 332 aa11.57□□□□□ -0.56
CIT-216ENST00000544872 IRX6P78412 446 aaPredicted RBP11.57□□□□□ -0.56
CIT-216ENST00000544872 TTF1Q15361 905 aaPredicted RBP11.57□□□□□ -0.56
CIT-216ENST00000544872 ANKRD45Q5TZF3 282 aa11.57□□□□□ -0.56
CIT-216ENST00000544872 ERICH6Q7L0X2 663 aa11.57□□□□□ -0.56
CIT-216ENST00000544872 SPATA5Q8NB90 893 aa11.57□□□□□ -0.56
CIT-216ENST00000544872 IL27Q8NEV9 243 aa11.57□□□□□ -0.56
CIT-216ENST00000544872 U2AF1L4Q8WU68 220 aaKnown RBP11.57□□□□□ -0.56
CIT-216ENST00000544872 MYLIPQ8WY64 445 aa11.57□□□□□ -0.56
CIT-216ENST00000544872 TEKT1Q969V4 418 aa11.57□□□□□ -0.56
CIT-216ENST00000544872 MYOZ2Q9NPC6 264 aa11.57□□□□□ -0.56
CIT-216ENST00000544872 SERPINA10Q9UK55 444 aa11.57□□□□□ -0.56
CIT-216ENST00000544872 ANGEL1Q9UNK9 670 aaKnown RBP11.57□□□□□ -0.56
CIT-216ENST00000544872 CACNA1GO43497 2377 aa11.57□□□□□ -0.56
CIT-216ENST00000544872 ZBTB22O15209 634 aa11.56□□□□□ -0.56
CIT-216ENST00000544872 TFRCP02786 760 aaKnown RBP11.56□□□□□ -0.56
CIT-216ENST00000544872 ZBTB48P10074 688 aaPredicted RBP11.56□□□□□ -0.56
CIT-216ENST00000544872 ADORA1P30542 326 aa11.56□□□□□ -0.56
CIT-216ENST00000544872 PHKA1P46020 1223 aa11.56□□□□□ -0.56
CIT-216ENST00000544872 MRE11P49959 708 aa11.56□□□□□ -0.56
CIT-216ENST00000544872 ZNF280AP59817 542 aaPredicted RBP11.56□□□□□ -0.56
CIT-216ENST00000544872 HDLBPQ00341 1268 aaKnown RBP11.56□□□□□ -0.56
CIT-216ENST00000544872 TMED8Q6PL24 325 aaPredicted RBP11.56□□□□□ -0.56
CIT-216ENST00000544872 ZNF512BQ96KM6 892 aaPredicted RBP11.56□□□□□ -0.56
CIT-216ENST00000544872 MRIQ9BWK5 157 aa11.56□□□□□ -0.56
CIT-216ENST00000544872 RAI14Q9P0K7 980 aa11.56□□□□□ -0.56
CIT-216ENST00000544872 JAG2Q9Y219 1238 aa11.56□□□□□ -0.56
CIT-216ENST00000544872 PDS5AQ29RF7 1337 aaKnown RBP11.56□□□□□ -0.56
CIT-216ENST00000544872 UBXN2AP68543 259 aa11.55□□□□□ -0.56
CIT-216ENST00000544872 TNFAIP1Q13829 316 aa11.55□□□□□ -0.56
CIT-216ENST00000544872 RAET1EQ8TD07 263 aa11.55□□□□□ -0.56
CIT-216ENST00000544872 ADAMTS19Q8TE59 1207 aa11.55□□□□□ -0.56
CIT-216ENST00000544872 EAF2Q96CJ1 260 aaPredicted RBP11.55□□□□□ -0.56
CIT-216ENST00000544872 UHRF1Q96T88 793 aaPredicted RBP11.55□□□□□ -0.56
CIT-216ENST00000544872 DBNDD2Q9BQY9 259 aa11.55□□□□□ -0.56
CIT-216ENST00000544872 PRUNE2Q8WUY3 3088 aa11.54□□□□□ -0.56
CIT-216ENST00000544872 BAG3O95817 575 aa11.54□□□□□ -0.56
CIT-216ENST00000544872 ARID4AP29374 1257 aaPredicted RBP11.54□□□□□ -0.56
CIT-216ENST00000544872 GRK4P32298 578 aa11.54□□□□□ -0.56
CIT-216ENST00000544872 TNNI2P48788 182 aa11.54□□□□□ -0.56
CIT-216ENST00000544872 TAF1CQ15572 869 aaPredicted RBP11.54□□□□□ -0.56
CIT-216ENST00000544872 ERICH6BQ5W0A0 696 aa11.54□□□□□ -0.56
CIT-216ENST00000544872 ZSCAN25Q6NSZ9 544 aa11.54□□□□□ -0.56
CIT-216ENST00000544872 CERS3Q8IU89 383 aa11.54□□□□□ -0.56
CIT-216ENST00000544872 WNK4Q96J92 1243 aa11.54□□□□□ -0.56
CIT-216ENST00000544872 GMLQ99445 158 aa11.54□□□□□ -0.56
CIT-216ENST00000544872 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.54□□□□□ -0.56
CIT-216ENST00000544872 ZFYVE28Q9HCC9 887 aa11.54□□□□□ -0.56
CIT-216ENST00000544872 ECHDC1Q9NTX5 307 aa11.54□□□□□ -0.56
CIT-216ENST00000544872 DBNLQ9UJU6 430 aaKnown RBP11.54□□□□□ -0.56
CIT-216ENST00000544872 SALL1Q9NSC2 1324 aa11.54□□□□□ -0.56
CIT-216ENST00000544872 LAMA2P24043 3122 aaKnown RBP11.53□□□□□ -0.56
CIT-216ENST00000544872 PRMT2P55345 433 aa11.53□□□□□ -0.56
CIT-216ENST00000544872 RASGRF1Q13972 1273 aa11.53□□□□□ -0.56
CIT-216ENST00000544872 CFAP100Q494V2 611 aa11.53□□□□□ -0.56
CIT-216ENST00000544872 APOBEC3FQ8IUX4 373 aaKnown RBP11.53□□□□□ -0.56
CIT-216ENST00000544872 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.53□□□□□ -0.56
CIT-216ENST00000544872 HOOK2Q96ED9 719 aa11.53□□□□□ -0.56
CIT-216ENST00000544872 MXD3Q9BW11 206 aa11.53□□□□□ -0.56
CIT-216ENST00000544872 ARHGAP39Q9C0H5 1083 aa11.53□□□□□ -0.56
CIT-216ENST00000544872 HMG20BQ9P0W2 317 aa11.53□□□□□ -0.56
CIT-216ENST00000544872 EYSQ5T1H1 3165 aa11.53□□□□□ -0.56
CIT-216ENST00000544872 WDHD1O75717 1129 aaPredicted RBP11.52□□□□□ -0.57
CIT-216ENST00000544872 SGPL1O95470 568 aa11.52□□□□□ -0.57
CIT-216ENST00000544872 PLCG2P16885 1265 aa11.52□□□□□ -0.57
CIT-216ENST00000544872 ATP5JP18859 108 aa11.52□□□□□ -0.57
CIT-216ENST00000544872 CRKP46108 304 aa11.52□□□□□ -0.57
CIT-216ENST00000544872 B4GALNT3Q6L9W6 998 aa11.52□□□□□ -0.57
CIT-216ENST00000544872 HHIPL2Q6UWX4 724 aa11.52□□□□□ -0.57
CIT-216ENST00000544872 MTMR14Q8NCE2 650 aa11.52□□□□□ -0.57
CIT-216ENST00000544872 PAWRQ96IZ0 340 aaKnown RBP11.52□□□□□ -0.57
CIT-216ENST00000544872 CCDC136Q96JN2 1154 aa11.52□□□□□ -0.57
CIT-216ENST00000544872 TRIM47Q96LD4 638 aa11.52□□□□□ -0.57
CIT-216ENST00000544872 DNAJC2Q99543 621 aaKnown RBP11.52□□□□□ -0.57
CIT-216ENST00000544872 LRFN3Q9BTN0 628 aa11.52□□□□□ -0.57
CIT-216ENST00000544872 SMARCA5O60264 1052 aaPredicted RBP11.51□□□□□ -0.57
CIT-216ENST00000544872 IDH1O75874 414 aaKnown RBP11.51□□□□□ -0.57
CIT-216ENST00000544872 GLRX3O76003 335 aaKnown RBP11.51□□□□□ -0.57
CIT-216ENST00000544872 MAP4K4O95819 1239 aaPredicted RBP11.51□□□□□ -0.57
CIT-216ENST00000544872 GNRH1P01148 92 aa11.51□□□□□ -0.57
CIT-216ENST00000544872 SUPT20HL1Q3ZLR7 823 aa11.51□□□□□ -0.57
CIT-216ENST00000544872 LDLRAD1Q5T700 205 aa11.51□□□□□ -0.57
CIT-216ENST00000544872 NAA16Q6N069 864 aaPredicted RBP11.51□□□□□ -0.57
CIT-216ENST00000544872 NECAB2Q7Z6G3 386 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms