RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 PPATQ06203 517 aa6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 SNAPC2Q13487 334 aa6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 KIF22Q14807 665 aa6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 SPRYD7Q5W111 196 aa6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 CDC42EP5Q6NZY7 148 aa6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 CHRDL2Q6WN34 429 aa6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 RHPN1Q8TCX5 695 aa6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 WRNIP1Q96S55 665 aa6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 CFHR5Q9BXR6 569 aa6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 LRRCC1Q9C099 1032 aa6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 C1orf115Q9H7X2 142 aa6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 ZCCHC17Q9NP64 241 aaKnown RBP6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 HMG20BQ9P0W2 317 aa6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 RBM27Q9P2N5 1060 aaKnown RBP6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 TAOK2Q9UL54 1235 aa6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 EXOC6BQ9Y2D4 811 aa6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 LAMB1P07942 1786 aa6.81□□□□□ -1.32
CLSTN3-215ENST00000544584 GAKO14976 1311 aa6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 ERC2O15083 957 aa6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 USP2O75604 605 aaPredicted RBP6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 IDH1O75874 414 aaKnown RBP6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 TCP10Q12799 353 aa6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 DIXDC1Q155Q3 683 aa6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 FASTKD5Q7L8L6 764 aaKnown RBP6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 TEX11Q8IYF3 940 aa6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 NSUN4Q96CB9 384 aaKnown RBP6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 OPTNQ96CV9 577 aa6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 WNK4Q96J92 1243 aa6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 YTHDC1Q96MU7 727 aaKnown RBP6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 ZFYVE28Q9HCC9 887 aa6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 PRDM6Q9NQX0 595 aa6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 GINM1Q9NU53 330 aa6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 HERC5Q9UII4 1024 aaKnown RBP6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 SCAF8Q9UPN6 1271 aaKnown RBP6.8□□□□□ -1.32
CLSTN3-215ENST00000544584 APBB1O00213 710 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 TBC1D12O60347 775 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 CTNND1O60716 968 aaKnown RBP6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 FKTNO75072 461 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 EN2P19622 333 aaPredicted RBP6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 MCAMP43121 646 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 USP5P45974 858 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 RGS3P49796 1198 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 PABPC4Q13310 644 aaKnown RBP eCLIP6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 PPIL2Q13356 520 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 PICALMQ13492 652 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 IFNL1Q8IU54 200 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 CRACR2BQ8N4Y2 399 aaPredicted RBP6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 ARMC5Q96C12 935 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 ERO1AQ96HE7 468 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 DBNDD2Q9BQY9 259 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 CCDC8Q9H0W5 538 aaPredicted RBP6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 OSBPL5Q9H0X9 879 aaPredicted RBP6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 ELP3Q9H9T3 547 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 AS3MTQ9HBK9 375 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 PI4KBQ9UBF8 816 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 TNNQ9UQP3 1299 aa6.79□□□□□ -1.32
CLSTN3-215ENST00000544584 CCL15-CCL14A0A0B4J2E2 113 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 A0A1W2PPC1 479 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 CXCL11O14625 94 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 TBC1D8O95759 1140 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 GNRH1P01148 92 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 CYP7A1P22680 504 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 HOXD10P28358 340 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 CACNB3P54284 484 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 RRP1P56182 461 aaKnown RBP6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 PPP4CP60510 307 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 MKRN3Q13064 507 aaKnown RBP6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 VGLL4Q14135 290 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 CCL15Q16663 113 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 NOL9Q5SY16 702 aaKnown RBP6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 DLK2Q6UY11 383 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 MOB2Q70IA6 237 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 MIGA2Q7L4E1 593 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 TTC6Q86TZ1 520 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 FOXP4Q8IVH2 680 aaPredicted RBP6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 EAF2Q96CJ1 260 aaPredicted RBP6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 TEPSINQ96N21 525 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 CRNKL1Q9BZJ0 848 aaKnown RBP6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 RWDD1Q9H446 243 aaPredicted RBP6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 SNRKQ9NRH2 765 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 DBNLQ9UJU6 430 aaKnown RBP6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 PNMA3Q9UL41 463 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 PCDHAC2Q9Y5I4 1007 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 SPTBN5Q9NRC6 3674 aaKnown RBP6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 ECM29Q5VYK3 1845 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 MYH13Q9UKX3 1938 aa6.78□□□□□ -1.32
CLSTN3-215ENST00000544584 A0A1B0GUL6 1792 aa6.77□□□□□ -1.33
CLSTN3-215ENST00000544584 ARAP2Q8WZ64 1704 aa6.77□□□□□ -1.33
CLSTN3-215ENST00000544584 MAGEB6P1A0A0J9YX57 407 aa6.77□□□□□ -1.33
CLSTN3-215ENST00000544584 TESPA1A2RU30 521 aaPredicted RBP6.77□□□□□ -1.33
CLSTN3-215ENST00000544584 SPDYE5A6NIY4 337 aa6.77□□□□□ -1.33
CLSTN3-215ENST00000544584 CYP2E1P05181 493 aaPredicted RBP6.77□□□□□ -1.33
CLSTN3-215ENST00000544584 ZFYP08048 801 aaPredicted RBP6.77□□□□□ -1.33
CLSTN3-215ENST00000544584 ASNSP08243 561 aa6.77□□□□□ -1.33
CLSTN3-215ENST00000544584 ATP5JP18859 108 aa6.77□□□□□ -1.33
CLSTN3-215ENST00000544584 ZAP70P43403 619 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms