RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 MVPQ14764 893 aaKnown RBP17.19■□□□□ 0.34
SEMA4D-224ENST00000544513 DZIP1Q86YF9 867 aaKnown RBP17.19■□□□□ 0.34
SEMA4D-224ENST00000544513 SCYL3Q8IZE3 742 aa17.19■□□□□ 0.34
SEMA4D-224ENST00000544513 SH3TC2Q8TF17 1288 aa17.19■□□□□ 0.34
SEMA4D-224ENST00000544513 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
SEMA4D-224ENST00000544513 DDX4Q9NQI0 724 aaKnown RBP17.19■□□□□ 0.34
SEMA4D-224ENST00000544513 SRRDQ9UH36 339 aa17.19■□□□□ 0.34
SEMA4D-224ENST00000544513 GPR75-ASB3A0A0A6YYF3 556 aa17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 A0A0G2JLL6 359 aaPredicted RBP17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 DDTLA6NHG4 134 aaPredicted RBP17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 NPM3O75607 178 aaKnown RBP17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 BCRP11274 1271 aa17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 TRIM27P14373 513 aa17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 PTPRAP18433 802 aa17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 PSMC4P43686 418 aa17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 RHBDL3P58872 404 aa17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 MECOMQ03112 1051 aa17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 PRRT2Q7Z6L0 340 aaPredicted RBP17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 ABCF2Q9UG63 623 aa17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 AFG3L2Q9Y4W6 797 aa17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 ZHX2Q9Y6X8 837 aa17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 DOCK2Q92608 1830 aa17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 MROH7-TTC4A0A0A0MT08 1334 aa17.18■□□□□ 0.34
SEMA4D-224ENST00000544513 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
SEMA4D-224ENST00000544513 BTDP43251 543 aa17.17■□□□□ 0.34
SEMA4D-224ENST00000544513 PARK7Q99497 189 aaKnown RBP17.17■□□□□ 0.34
SEMA4D-224ENST00000544513 PICK1Q9NRD5 415 aa17.17■□□□□ 0.34
SEMA4D-224ENST00000544513 HMG20BQ9P0W2 317 aa17.17■□□□□ 0.34
SEMA4D-224ENST00000544513 CTNND1O60716 968 aaKnown RBP17.16■□□□□ 0.34
SEMA4D-224ENST00000544513 GNAI2P04899 355 aa17.16■□□□□ 0.34
SEMA4D-224ENST00000544513 OSBPP22059 807 aa17.16■□□□□ 0.34
SEMA4D-224ENST00000544513 SLC4A8Q2Y0W8 1093 aa17.16■□□□□ 0.34
SEMA4D-224ENST00000544513 ATF7IPQ6VMQ6 1270 aa17.16■□□□□ 0.34
SEMA4D-224ENST00000544513 FASTKD5Q7L8L6 764 aaKnown RBP17.16■□□□□ 0.34
SEMA4D-224ENST00000544513 SLC45A1Q9Y2W3 748 aa17.16■□□□□ 0.34
SEMA4D-224ENST00000544513 TBC1D12O60347 775 aa17.15■□□□□ 0.34
SEMA4D-224ENST00000544513 MAP4K4O95819 1239 aaPredicted RBP17.15■□□□□ 0.34
SEMA4D-224ENST00000544513 SLURP2P0DP57 97 aa17.15■□□□□ 0.34
SEMA4D-224ENST00000544513 CYP2C8P10632 490 aa17.15■□□□□ 0.34
SEMA4D-224ENST00000544513 HOXD10P28358 340 aa17.15■□□□□ 0.34
SEMA4D-224ENST00000544513 ARID4AP29374 1257 aaPredicted RBP17.15■□□□□ 0.34
SEMA4D-224ENST00000544513 HABP4Q5JVS0 413 aaKnown RBP17.15■□□□□ 0.34
SEMA4D-224ENST00000544513 ERICH6Q7L0X2 663 aa17.15■□□□□ 0.34
SEMA4D-224ENST00000544513 ZSCAN29Q8IWY8 852 aaPredicted RBP17.15■□□□□ 0.34
SEMA4D-224ENST00000544513 SPATA5Q8NB90 893 aa17.15■□□□□ 0.34
SEMA4D-224ENST00000544513 NSUN4Q96CB9 384 aaKnown RBP17.15■□□□□ 0.34
SEMA4D-224ENST00000544513 TNNQ9UQP3 1299 aa17.15■□□□□ 0.34
SEMA4D-224ENST00000544513 PNMA6EA0A0J9YXQ4 647 aa17.14■□□□□ 0.33
SEMA4D-224ENST00000544513 BCAR3O75815 825 aa17.14■□□□□ 0.33
SEMA4D-224ENST00000544513 FMNL1O95466 1100 aaPredicted RBP17.14■□□□□ 0.33
SEMA4D-224ENST00000544513 PI16Q6UXB8 463 aa17.14■□□□□ 0.33
SEMA4D-224ENST00000544513 NEUROD6Q96NK8 337 aa17.14■□□□□ 0.33
SEMA4D-224ENST00000544513 PHIPQ8WWQ0 1821 aa17.14■□□□□ 0.33
SEMA4D-224ENST00000544513 PTPRFP10586 1907 aa17.13■□□□□ 0.33
SEMA4D-224ENST00000544513 COL2A1P02458 1487 aaPredicted RBP17.13■□□□□ 0.33
SEMA4D-224ENST00000544513 TRIOBPQ9H2D6 2365 aa17.13■□□□□ 0.33
SEMA4D-224ENST00000544513 MYCP01106 439 aaPredicted RBP17.13■□□□□ 0.33
SEMA4D-224ENST00000544513 GRK4P32298 578 aa17.13■□□□□ 0.33
SEMA4D-224ENST00000544513 PICALMQ13492 652 aa17.13■□□□□ 0.33
SEMA4D-224ENST00000544513 MTFR1Q15390 333 aa17.13■□□□□ 0.33
SEMA4D-224ENST00000544513 TBC1D9Q6ZT07 1266 aa17.13■□□□□ 0.33
SEMA4D-224ENST00000544513 DOCK1Q14185 1865 aa17.12■□□□□ 0.33
SEMA4D-224ENST00000544513 LDHCP07864 332 aa17.12■□□□□ 0.33
SEMA4D-224ENST00000544513 MCAMP43121 646 aa17.12■□□□□ 0.33
SEMA4D-224ENST00000544513 GSTO1P78417 241 aa17.12■□□□□ 0.33
SEMA4D-224ENST00000544513 RAET1EQ8TD07 263 aa17.12■□□□□ 0.33
SEMA4D-224ENST00000544513 SHISA4Q96DD7 197 aa17.12■□□□□ 0.33
SEMA4D-224ENST00000544513 MYPNQ86TC9 1320 aa17.12■□□□□ 0.33
SEMA4D-224ENST00000544513 SZT2Q5T011 3432 aa17.11■□□□□ 0.33
SEMA4D-224ENST00000544513 ECM2O94769 699 aaPredicted RBP17.11■□□□□ 0.33
SEMA4D-224ENST00000544513 FCGRTP55899 365 aa17.11■□□□□ 0.33
SEMA4D-224ENST00000544513 PRKCZQ05513 592 aa17.11■□□□□ 0.33
SEMA4D-224ENST00000544513 G3BP1Q13283 466 aaKnown RBP eCLIP17.11■□□□□ 0.33
SEMA4D-224ENST00000544513 POLA2Q14181 598 aa17.11■□□□□ 0.33
SEMA4D-224ENST00000544513 GORABQ5T7V8 394 aa17.11■□□□□ 0.33
SEMA4D-224ENST00000544513 MGAMO43451 1857 aa17.1■□□□□ 0.33
SEMA4D-224ENST00000544513 TRIM75PA6NK02 468 aa17.1■□□□□ 0.33
SEMA4D-224ENST00000544513 UQCRFS1P1P0C7P4 283 aa17.1■□□□□ 0.33
SEMA4D-224ENST00000544513 GADL1Q6ZQY3 521 aa17.1■□□□□ 0.33
SEMA4D-224ENST00000544513 UBE2Q1Q7Z7E8 422 aa17.1■□□□□ 0.33
SEMA4D-224ENST00000544513 FRAT1Q92837 279 aaPredicted RBP17.1■□□□□ 0.33
SEMA4D-224ENST00000544513 CLUAP1Q96AJ1 413 aa17.1■□□□□ 0.33
SEMA4D-224ENST00000544513 GPR108Q9NPR9 543 aa17.1■□□□□ 0.33
SEMA4D-224ENST00000544513 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.1■□□□□ 0.33
SEMA4D-224ENST00000544513 GJB1P08034 283 aa17.09■□□□□ 0.33
SEMA4D-224ENST00000544513 CCL5P13501 91 aa17.09■□□□□ 0.33
SEMA4D-224ENST00000544513 GJA8P48165 433 aa17.09■□□□□ 0.33
SEMA4D-224ENST00000544513 TMEM57Q8N5G2 664 aa17.09■□□□□ 0.33
SEMA4D-224ENST00000544513 SSH3Q8TE77 659 aa17.09■□□□□ 0.33
SEMA4D-224ENST00000544513 OSBPL5Q9H0X9 879 aaPredicted RBP17.09■□□□□ 0.33
SEMA4D-224ENST00000544513 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.09■□□□□ 0.33
SEMA4D-224ENST00000544513 RAI14Q9P0K7 980 aa17.09■□□□□ 0.33
SEMA4D-224ENST00000544513 GABRQQ9UN88 632 aa17.09■□□□□ 0.33
SEMA4D-224ENST00000544513 AGTPBP1Q9UPW5 1226 aa17.09■□□□□ 0.33
SEMA4D-224ENST00000544513 FAM196BA6NMK8 535 aa17.08■□□□□ 0.32
SEMA4D-224ENST00000544513 RRP1BQ14684 758 aaKnown RBP17.08■□□□□ 0.32
SEMA4D-224ENST00000544513 CCDC84Q86UT8 332 aaPredicted RBP17.08■□□□□ 0.32
SEMA4D-224ENST00000544513 PROCA1Q8NCQ7 364 aaPredicted RBP17.08■□□□□ 0.32
SEMA4D-224ENST00000544513 SLAIN1Q8ND83 568 aa17.08■□□□□ 0.32
SEMA4D-224ENST00000544513 NKX2-3Q8TAU0 364 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms