RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 KIF23Q02241 960 aaPredicted RBP26.45■■□□□ 1.82
OTUB1-212ENST00000543988 SLC9C2Q5TAH2 1124 aa26.45■■□□□ 1.82
OTUB1-212ENST00000543988 TMED8Q6PL24 325 aaPredicted RBP26.45■■□□□ 1.82
OTUB1-212ENST00000543988 MIGA2Q7L4E1 593 aa26.45■■□□□ 1.82
OTUB1-212ENST00000543988 SMC5Q8IY18 1101 aa26.45■■□□□ 1.82
OTUB1-212ENST00000543988 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.45■■□□□ 1.822e-8■■■■□ 20
OTUB1-212ENST00000543988 CSRNP1Q96S65 589 aa26.45■■□□□ 1.82
OTUB1-212ENST00000543988 DDTLA6NHG4 134 aaPredicted RBP26.44■■□□□ 1.82
OTUB1-212ENST00000543988 UNCXA6NJT0 531 aa26.44■■□□□ 1.82
OTUB1-212ENST00000543988 MKRN3Q13064 507 aaKnown RBP26.44■■□□□ 1.82
OTUB1-212ENST00000543988 DCAF15Q66K64 600 aa26.44■■□□□ 1.82
OTUB1-212ENST00000543988 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.44■■□□□ 1.82
OTUB1-212ENST00000543988 ZSCAN29Q8IWY8 852 aaPredicted RBP26.44■■□□□ 1.82
OTUB1-212ENST00000543988 ANKRD13AQ8IZ07 590 aa26.44■■□□□ 1.82
OTUB1-212ENST00000543988 SALL3Q9BXA9 1300 aa26.43■■□□□ 1.82
OTUB1-212ENST00000543988 VGLL4Q14135 290 aa26.43■■□□□ 1.82
OTUB1-212ENST00000543988 SLC10A4Q96EP9 437 aa26.43■■□□□ 1.82
OTUB1-212ENST00000543988 WRNIP1Q96S55 665 aa26.43■■□□□ 1.82
OTUB1-212ENST00000543988 ZBTB47Q9UFB7 747 aaPredicted RBP26.43■■□□□ 1.82
OTUB1-212ENST00000543988 TTC41PQ6P2S7 1318 aa26.42■■□□□ 1.82
OTUB1-212ENST00000543988 ZNF532Q9HCE3 1301 aa26.42■■□□□ 1.82
OTUB1-212ENST00000543988 OTOFQ9HC10 1997 aa26.42■■□□□ 1.82
OTUB1-212ENST00000543988 TCRBV5S4A2TA0A5A2 114 aa26.42■■□□□ 1.82
OTUB1-212ENST00000543988 MX1P20591 662 aa26.42■■□□□ 1.82
OTUB1-212ENST00000543988 SPRYD7Q5W111 196 aa26.42■■□□□ 1.82
OTUB1-212ENST00000543988 AIDAQ96BJ3 306 aa26.42■■□□□ 1.82
OTUB1-212ENST00000543988 ZNF341Q9BYN7 854 aa26.42■■□□□ 1.82
OTUB1-212ENST00000543988 OSBPL5Q9H0X9 879 aaPredicted RBP26.42■■□□□ 1.82
OTUB1-212ENST00000543988 COL2A1P02458 1487 aaPredicted RBP26.42■■□□□ 1.82
OTUB1-212ENST00000543988 FOXN1O15353 648 aa26.41■■□□□ 1.82
OTUB1-212ENST00000543988 MAP3K9P80192 1104 aa26.41■■□□□ 1.82
OTUB1-212ENST00000543988 PI4K2BQ8TCG2 481 aa26.41■■□□□ 1.82
OTUB1-212ENST00000543988 WNK4Q96J92 1243 aa26.41■■□□□ 1.82
OTUB1-212ENST00000543988 ELP3Q9H9T3 547 aa26.41■■□□□ 1.82
OTUB1-212ENST00000543988 FLT1P17948 1338 aa26.4■■□□□ 1.82
OTUB1-212ENST00000543988 SLFNL1Q499Z3 407 aa26.4■■□□□ 1.82
OTUB1-212ENST00000543988 MAPKAPK5Q8IW41 473 aa26.4■■□□□ 1.82
OTUB1-212ENST00000543988 TGFBRAP1Q8WUH2 860 aa26.4■■□□□ 1.82
OTUB1-212ENST00000543988 RIOK1Q9BRS2 568 aaKnown RBP26.4■■□□□ 1.82
OTUB1-212ENST00000543988 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.4■■□□□ 1.825e-6■■□□□ 11.5
OTUB1-212ENST00000543988 CHGBP05060 677 aa26.39■■□□□ 1.82
OTUB1-212ENST00000543988 SLURP2P0DP57 97 aa26.39■■□□□ 1.82
OTUB1-212ENST00000543988 ADD2P35612 726 aa26.39■■□□□ 1.82
OTUB1-212ENST00000543988 GJA5P36382 358 aa26.39■■□□□ 1.82
OTUB1-212ENST00000543988 B4GALNT3Q6L9W6 998 aa26.39■■□□□ 1.82
OTUB1-212ENST00000543988 ZKSCAN4Q969J2 545 aaPredicted RBP26.39■■□□□ 1.82
OTUB1-212ENST00000543988 LNPKQ9C0E8 428 aa26.39■■□□□ 1.82
OTUB1-212ENST00000543988 CSADQ9Y600 493 aa26.39■■□□□ 1.82
OTUB1-212ENST00000543988 SNCAIPQ9Y6H5 919 aa26.39■■□□□ 1.82
OTUB1-212ENST00000543988 ERC2O15083 957 aa26.38■■□□□ 1.81
OTUB1-212ENST00000543988 INPP5BP32019 993 aa26.38■■□□□ 1.81
OTUB1-212ENST00000543988 CERS3Q8IU89 383 aa26.38■■□□□ 1.81
OTUB1-212ENST00000543988 CNKSR2Q8WXI2 1034 aa26.38■■□□□ 1.81
OTUB1-212ENST00000543988 ZNF112Q9UJU3 913 aa26.38■■□□□ 1.81
OTUB1-212ENST00000543988 MAGEB6P1A0A0J9YX57 407 aa26.37■■□□□ 1.81
OTUB1-212ENST00000543988 GLRX3O76003 335 aaKnown RBP26.37■■□□□ 1.81
OTUB1-212ENST00000543988 BEGAINQ9BUH8 593 aa26.37■■□□□ 1.81
OTUB1-212ENST00000543988 ZBTB48P10074 688 aaPredicted RBP26.36■■□□□ 1.81
OTUB1-212ENST00000543988 KBTBD3Q8NAB2 608 aa26.36■■□□□ 1.81
OTUB1-212ENST00000543988 OPTNQ96CV9 577 aa26.36■■□□□ 1.81
OTUB1-212ENST00000543988 MAP3K10Q02779 954 aa26.35■■□□□ 1.81
OTUB1-212ENST00000543988 NUCB1Q02818 461 aa26.35■■□□□ 1.81
OTUB1-212ENST00000543988 STAP2Q9UGK3 403 aa26.35■■□□□ 1.81
OTUB1-212ENST00000543988 SAP30BPQ9UHR5 308 aaKnown RBP26.35■■□□□ 1.81
OTUB1-212ENST00000543988 FAM196BA6NMK8 535 aa26.34■■□□□ 1.81
OTUB1-212ENST00000543988 PHF20L1A8MW92 1017 aa26.34■■□□□ 1.81
OTUB1-212ENST00000543988 CTCFP49711 727 aaPredicted RBP26.34■■□□□ 1.81
OTUB1-212ENST00000543988 UBE3CQ15386 1083 aa26.34■■□□□ 1.81
OTUB1-212ENST00000543988 CHD1LQ86WJ1 897 aa26.34■■□□□ 1.81
OTUB1-212ENST00000543988 LCORLQ8N3X6 602 aa26.34■■□□□ 1.81
OTUB1-212ENST00000543988 TSKSQ9UJT2 592 aa26.34■■□□□ 1.81
OTUB1-212ENST00000543988 SPDYE5A6NIY4 337 aa26.33■■□□□ 1.81
OTUB1-212ENST00000543988 MBD4O95243 580 aa26.33■■□□□ 1.81
OTUB1-212ENST00000543988 HSPA8P11142 646 aaKnown RBP26.33■■□□□ 1.81
OTUB1-212ENST00000543988 USP5P45974 858 aa26.33■■□□□ 1.81
OTUB1-212ENST00000543988 PDE1AP54750 535 aa26.33■■□□□ 1.81
OTUB1-212ENST00000543988 REM2Q8IYK8 340 aaPredicted RBP26.33■■□□□ 1.81
OTUB1-212ENST00000543988 OTUD5Q96G74 571 aa26.33■■□□□ 1.81
OTUB1-212ENST00000543988 DHX36Q9H2U1 1008 aaKnown RBP26.33■■□□□ 1.81
OTUB1-212ENST00000543988 ARMT1Q9H993 441 aa26.33■■□□□ 1.81
OTUB1-212ENST00000543988 PALD1Q9ULE6 856 aa26.33■■□□□ 1.81
OTUB1-212ENST00000543988 CA12O43570 354 aa26.32■■□□□ 1.8
OTUB1-212ENST00000543988 SREBF2Q12772 1141 aa26.32■■□□□ 1.8
OTUB1-212ENST00000543988 NOL9Q5SY16 702 aaKnown RBP26.32■■□□□ 1.8
OTUB1-212ENST00000543988 ZSCAN25Q6NSZ9 544 aa26.32■■□□□ 1.8
OTUB1-212ENST00000543988 CRNKL1Q9BZJ0 848 aaKnown RBP26.32■■□□□ 1.8
OTUB1-212ENST00000543988 MANSC4A6NHS7 340 aaPredicted RBP26.31■■□□□ 1.8
OTUB1-212ENST00000543988 TBC1D12O60347 775 aa26.31■■□□□ 1.8
OTUB1-212ENST00000543988 SLC4A8Q2Y0W8 1093 aa26.31■■□□□ 1.8
OTUB1-212ENST00000543988 ERO1BQ86YB8 467 aa26.31■■□□□ 1.8
OTUB1-212ENST00000543988 RNF186Q9NXI6 227 aa26.31■■□□□ 1.8
OTUB1-212ENST00000543988 TM4SF4P48230 202 aa26.3■■□□□ 1.8
OTUB1-212ENST00000543988 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.3■■□□□ 1.8
OTUB1-212ENST00000543988 PI4KBQ9UBF8 816 aa26.3■■□□□ 1.8
OTUB1-212ENST00000543988 FOCADQ5VW36 1801 aa26.3■■□□□ 1.8
OTUB1-212ENST00000543988 CDK5RAP2Q96SN8 1893 aa26.3■■□□□ 1.8
OTUB1-212ENST00000543988 AK9Q5TCS8 1911 aa26.29■■□□□ 1.8
OTUB1-212ENST00000543988 LBX1P52954 281 aa26.29■■□□□ 1.8
OTUB1-212ENST00000543988 SAGE1Q9NXZ1 904 aa26.29■■□□□ 1.8
OTUB1-212ENST00000543988 RNF113AO15541 343 aaKnown RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms