RNA–Protein interactions for RNA: ENST00000542371.1

USP5-207, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 2

Gene USP5, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-207ENST00000542371 HHIPL2Q6UWX4 724 aa18.74■□□□□ 0.59
USP5-207ENST00000542371 CHST3Q7LGC8 479 aa18.74■□□□□ 0.59
USP5-207ENST00000542371 AMOTL1Q8IY63 956 aa18.74■□□□□ 0.59
USP5-207ENST00000542371 CERS5Q8N5B7 392 aa18.74■□□□□ 0.59
USP5-207ENST00000542371 SH3RF3Q8TEJ3 882 aaPredicted RBP18.74■□□□□ 0.59
USP5-207ENST00000542371 ESR2Q92731 530 aa18.74■□□□□ 0.59
USP5-207ENST00000542371 FBXW7Q969H0 707 aa18.74■□□□□ 0.59
USP5-207ENST00000542371 SGIP1Q9BQI5 828 aa18.74■□□□□ 0.59
USP5-207ENST00000542371 DBNDD1Q9H9R9 158 aa18.74■□□□□ 0.59
USP5-207ENST00000542371 USP17L3A6NCW0 530 aa18.73■□□□□ 0.59
USP5-207ENST00000542371 USP17L4A6NCW7 530 aa18.73■□□□□ 0.59
USP5-207ENST00000542371 ORC4O43929 436 aa18.73■□□□□ 0.59
USP5-207ENST00000542371 PDCP20941 246 aa18.73■□□□□ 0.59
USP5-207ENST00000542371 GJB2P29033 226 aa18.73■□□□□ 0.59
USP5-207ENST00000542371 MCM4P33991 863 aa18.73■□□□□ 0.59
USP5-207ENST00000542371 SART3Q15020 963 aaKnown RBP18.73■□□□□ 0.59
USP5-207ENST00000542371 USP17L1Q7RTZ2 530 aa18.73■□□□□ 0.59
USP5-207ENST00000542371 SGMS1Q86VZ5 419 aa18.73■□□□□ 0.59
USP5-207ENST00000542371 TMTC2Q8N394 836 aa18.73■□□□□ 0.59
USP5-207ENST00000542371 IGDCC4Q8TDY8 1250 aa18.73■□□□□ 0.59
USP5-207ENST00000542371 ZSWIM5Q9P217 1185 aa18.73■□□□□ 0.59
USP5-207ENST00000542371 BAZ2AQ9UIF9 1905 aaKnown RBP18.72■□□□□ 0.59
USP5-207ENST00000542371 PPIP5K2O43314 1243 aa18.72■□□□□ 0.59
USP5-207ENST00000542371 DHX16O60231 1041 aaKnown RBP18.72■□□□□ 0.59
USP5-207ENST00000542371 KDM4AO75164 1064 aa18.72■□□□□ 0.59
USP5-207ENST00000542371 SCRN1Q12765 414 aa18.72■□□□□ 0.59
USP5-207ENST00000542371 STK3Q13188 491 aa18.72■□□□□ 0.59
USP5-207ENST00000542371 NBR1Q14596 966 aa18.72■□□□□ 0.59
USP5-207ENST00000542371 AOC3Q16853 763 aa18.72■□□□□ 0.59
USP5-207ENST00000542371 DACT2Q5SW24 774 aa18.72■□□□□ 0.59
USP5-207ENST00000542371 TTF2Q9UNY4 1162 aaKnown RBP18.72■□□□□ 0.59
USP5-207ENST00000542371 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.72■□□□□ 0.59
USP5-207ENST00000542371 ZDHHC9Q9Y397 364 aa18.72■□□□□ 0.59
USP5-207ENST00000542371 DAGLAQ9Y4D2 1042 aa18.72■□□□□ 0.59
USP5-207ENST00000542371 TACC3Q9Y6A5 838 aa18.72■□□□□ 0.59
USP5-207ENST00000542371 NAV1Q8NEY1 1877 aa18.71■□□□□ 0.59
USP5-207ENST00000542371 ROBO3Q96MS0 1386 aa18.71■□□□□ 0.59
USP5-207ENST00000542371 KLF18A0A0U1RQI7 1052 aa18.71■□□□□ 0.59
USP5-207ENST00000542371 RHBDL3P58872 404 aa18.71■□□□□ 0.59
USP5-207ENST00000542371 HMGN5P82970 282 aaKnown RBP18.71■□□□□ 0.59
USP5-207ENST00000542371 PDE4BQ07343 736 aa18.71■□□□□ 0.59
USP5-207ENST00000542371 DALRD3Q5D0E6 543 aaKnown RBP18.71■□□□□ 0.59
USP5-207ENST00000542371 C12orf60Q5U649 245 aa18.71■□□□□ 0.59
USP5-207ENST00000542371 TEX11Q8IYF3 940 aa18.71■□□□□ 0.59
USP5-207ENST00000542371 SMARCC2Q8TAQ2 1214 aa18.71■□□□□ 0.59
USP5-207ENST00000542371 TEKT1Q969V4 418 aa18.71■□□□□ 0.59
USP5-207ENST00000542371 MCM9Q9NXL9 1143 aa18.71■□□□□ 0.59
USP5-207ENST00000542371 KIF3AQ9Y496 699 aa18.71■□□□□ 0.59
USP5-207ENST00000542371 ZNF646O15015 1829 aaPredicted RBP18.71■□□□□ 0.59
USP5-207ENST00000542371 ERICH2A1L162 156 aa18.7■□□□□ 0.58
USP5-207ENST00000542371 DDX11L8A8MPP1 907 aa18.7■□□□□ 0.58
USP5-207ENST00000542371 IFIT3O14879 490 aaKnown RBP18.7■□□□□ 0.58
USP5-207ENST00000542371 PKP1Q13835 747 aa18.7■□□□□ 0.58
USP5-207ENST00000542371 TMEM67Q5HYA8 995 aa18.7■□□□□ 0.58
USP5-207ENST00000542371 TGFBRAP1Q8WUH2 860 aa18.7■□□□□ 0.58
USP5-207ENST00000542371 LY9Q9HBG7 655 aa18.7■□□□□ 0.58
USP5-207ENST00000542371 TOMM22Q9NS69 142 aa18.7■□□□□ 0.58
USP5-207ENST00000542371 PSME4Q14997 1843 aa18.7■□□□□ 0.58
USP5-207ENST00000542371 BRCA1P38398 1863 aaKnown RBP18.69■□□□□ 0.58
USP5-207ENST00000542371 CDK5RAP2Q96SN8 1893 aa18.69■□□□□ 0.58
USP5-207ENST00000542371 STX6O43752 255 aa18.69■□□□□ 0.58
USP5-207ENST00000542371 SYT1P21579 422 aa18.69■□□□□ 0.58
USP5-207ENST00000542371 RCAN1P53805 252 aa18.69■□□□□ 0.58
USP5-207ENST00000542371 RRP12Q5JTH9 1297 aaKnown RBP18.69■□□□□ 0.58
USP5-207ENST00000542371 INCENPQ9NQS7 918 aa18.69■□□□□ 0.58
USP5-207ENST00000542371 GPHNQ9NQX3 736 aaPredicted RBP18.69■□□□□ 0.58
USP5-207ENST00000542371 BRPF3Q9ULD4 1205 aa18.69■□□□□ 0.58
USP5-207ENST00000542371 FOCADQ5VW36 1801 aa18.69■□□□□ 0.58
USP5-207ENST00000542371 MYO3BQ8WXR4 1341 aa18.69■□□□□ 0.58
USP5-207ENST00000542371 CYP2D7A0A087X1C5 515 aa18.68■□□□□ 0.58
USP5-207ENST00000542371 GOLGA8BA8MQT2 603 aa18.68■□□□□ 0.58
USP5-207ENST00000542371 GOLGA6L22H0YM25 854 aa18.68■□□□□ 0.58
USP5-207ENST00000542371 BAG4O95429 457 aaKnown RBP18.68■□□□□ 0.58
USP5-207ENST00000542371 USP17L8P0C7I0 530 aa18.68■□□□□ 0.58
USP5-207ENST00000542371 WTAPQ15007 396 aa18.68■□□□□ 0.58
USP5-207ENST00000542371 NSUN7Q8NE18 718 aaKnown RBP18.68■□□□□ 0.58
USP5-207ENST00000542371 ZDHHC15Q96MV8 337 aa18.68■□□□□ 0.58
USP5-207ENST00000542371 UBAC1Q9BSL1 405 aa18.68■□□□□ 0.58
USP5-207ENST00000542371 ZNF287Q9HBT7 754 aa18.68■□□□□ 0.58
USP5-207ENST00000542371 SCN9AQ15858 1988 aa18.68■□□□□ 0.58
USP5-207ENST00000542371 NID2Q14112 1375 aa18.68■□□□□ 0.58
USP5-207ENST00000542371 DDX60LQ5H9U9 1706 aaKnown RBP18.67■□□□□ 0.58
USP5-207ENST00000542371 CCDC69A6NI79 296 aa18.67■□□□□ 0.58
USP5-207ENST00000542371 ZSCAN22P10073 491 aaPredicted RBP18.67■□□□□ 0.58
USP5-207ENST00000542371 PTGER2P43116 358 aa18.67■□□□□ 0.58
USP5-207ENST00000542371 CRKP46108 304 aa18.67■□□□□ 0.58
USP5-207ENST00000542371 CCDC178Q5BJE1 867 aa18.67■□□□□ 0.58
USP5-207ENST00000542371 LARP1BQ659C4 914 aaKnown RBP18.67■□□□□ 0.58
USP5-207ENST00000542371 SYNE3Q6ZMZ3 975 aa18.67■□□□□ 0.58
USP5-207ENST00000542371 IQCA1Q86XH1 822 aa18.67■□□□□ 0.58
USP5-207ENST00000542371 RGS22Q8NE09 1264 aa18.67■□□□□ 0.58
USP5-207ENST00000542371 NKX2-3Q8TAU0 364 aa18.67■□□□□ 0.58
USP5-207ENST00000542371 SERPINA10Q9UK55 444 aa18.67■□□□□ 0.58
USP5-207ENST00000542371 NAP1L2Q9ULW6 460 aaPredicted RBP18.67■□□□□ 0.58
USP5-207ENST00000542371 HPS5Q9UPZ3 1129 aa18.67■□□□□ 0.58
USP5-207ENST00000542371 FLT1P17948 1338 aa18.67■□□□□ 0.58
USP5-207ENST00000542371 F8W031 263 aaPredicted RBP18.66■□□□□ 0.58
USP5-207ENST00000542371 ZBTB43O43298 467 aa18.66■□□□□ 0.58
USP5-207ENST00000542371 POLR3DP05423 398 aaPredicted RBP18.66■□□□□ 0.58
USP5-207ENST00000542371 CYP2D6P10635 497 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms