RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 KCNA3P22001 575 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 CCT2P78371 535 aaKnown RBP12.98□□□□□ -0.33
SCG3-202ENST00000542355 CCDC82Q8N4S0 544 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 SH3RF3Q8TEJ3 882 aaPredicted RBP12.98□□□□□ -0.33
SCG3-202ENST00000542355 MXD3Q9BW11 206 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 KRT23Q9C075 422 aa12.98□□□□□ -0.33
SCG3-202ENST00000542355 PFKFB2O60825 505 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 BRD1O95696 1058 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 POLD1P28340 1107 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 PDIA3P30101 505 aaKnown RBP12.97□□□□□ -0.33
SCG3-202ENST00000542355 PPP4CP60510 307 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 CC2D2BQ6DHV5 1058 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 PODNQ7Z5L7 613 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 ZNF274Q96GC6 653 aaPredicted RBP12.97□□□□□ -0.33
SCG3-202ENST00000542355 RTFDC1Q9BY42 306 aaPredicted RBP12.97□□□□□ -0.33
SCG3-202ENST00000542355 MTFR1LQ9H019 292 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 RNF41Q9H4P4 317 aaPredicted RBP12.97□□□□□ -0.33
SCG3-202ENST00000542355 KCNQ5Q9NR82 932 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 ANAPC4Q9UJX5 808 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 WDR19Q8NEZ3 1342 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 SYT1P21579 422 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 BTDP43251 543 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 USP5P45974 858 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 SLF2Q8IX21 1173 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 CERS5Q8N5B7 392 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 UPF1Q92900 1129 aaKnown RBP eCLIP12.97□□□□□ -0.33
SCG3-202ENST00000542355 BRPF3Q9ULD4 1205 aa12.97□□□□□ -0.33
SCG3-202ENST00000542355 GPR75-ASB3A0A0A6YYF3 556 aa12.96□□□□□ -0.33
SCG3-202ENST00000542355 KLF18A0A0U1RQI7 1052 aa12.96□□□□□ -0.33
SCG3-202ENST00000542355 EVCP57679 992 aa12.96□□□□□ -0.33
SCG3-202ENST00000542355 AOC3Q16853 763 aa12.96□□□□□ -0.33
SCG3-202ENST00000542355 TGFBRAP1Q8WUH2 860 aa12.96□□□□□ -0.33
SCG3-202ENST00000542355 NCOA5Q9HCD5 579 aaKnown RBP12.96□□□□□ -0.33
SCG3-202ENST00000542355 ANGEL1Q9UNK9 670 aaKnown RBP12.96□□□□□ -0.33
SCG3-202ENST00000542355 SLX4Q8IY92 1834 aa12.96□□□□□ -0.34
SCG3-202ENST00000542355 STX6O43752 255 aa12.96□□□□□ -0.34
SCG3-202ENST00000542355 BAG4O95429 457 aaKnown RBP12.96□□□□□ -0.34
SCG3-202ENST00000542355 EVX2Q03828 476 aa12.96□□□□□ -0.34
SCG3-202ENST00000542355 IGDCC4Q8TDY8 1250 aa12.96□□□□□ -0.34
SCG3-202ENST00000542355 FAM163AQ96GL9 167 aaPredicted RBP12.96□□□□□ -0.34
SCG3-202ENST00000542355 TMEM87BQ96K49 555 aa12.96□□□□□ -0.34
SCG3-202ENST00000542355 MCM9Q9NXL9 1143 aa12.96□□□□□ -0.34
SCG3-202ENST00000542355 PPP1R1BQ9UD71 204 aaPredicted RBP12.96□□□□□ -0.34
SCG3-202ENST00000542355 TTF2Q9UNY4 1162 aaKnown RBP12.96□□□□□ -0.34
SCG3-202ENST00000542355 MYH13Q9UKX3 1938 aa12.95□□□□□ -0.34
SCG3-202ENST00000542355 WDR33Q9C0J8 1336 aaKnown RBP12.95□□□□□ -0.34
SCG3-202ENST00000542355 SH2B2O14492 632 aaPredicted RBP12.95□□□□□ -0.34
SCG3-202ENST00000542355 ECE2O60344 883 aa12.95□□□□□ -0.34
SCG3-202ENST00000542355 JAK2O60674 1132 aa12.95□□□□□ -0.34
SCG3-202ENST00000542355 USP17L8P0C7I0 530 aa12.95□□□□□ -0.34
SCG3-202ENST00000542355 CYP2D6P10635 497 aa12.95□□□□□ -0.34
SCG3-202ENST00000542355 SLC4A8Q2Y0W8 1093 aa12.95□□□□□ -0.34
SCG3-202ENST00000542355 RAB11FIP4Q86YS3 637 aa12.95□□□□□ -0.34
SCG3-202ENST00000542355 ZKSCAN3Q9BRR0 538 aa12.95□□□□□ -0.34
SCG3-202ENST00000542355 SUGT1Q9Y2Z0 365 aa12.95□□□□□ -0.34
SCG3-202ENST00000542355 IFIT3O14879 490 aaKnown RBP12.94□□□□□ -0.34
SCG3-202ENST00000542355 PRDM1O75626 825 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 TGFB2P61812 414 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 KIAA2012Q0VF49 1180 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 CCDC93Q567U6 631 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 TMEM67Q5HYA8 995 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 LARP1BQ659C4 914 aaKnown RBP12.94□□□□□ -0.34
SCG3-202ENST00000542355 CLEC17AQ6ZS10 378 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 SUPT20HQ8NEM7 779 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 DDX11Q96FC9 970 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 SENP2Q9HC62 589 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 ARPP21Q9UBL0 812 aaPredicted RBP12.94□□□□□ -0.34
SCG3-202ENST00000542355 MKRN1Q9UHC7 482 aaKnown RBP12.94□□□□□ -0.34
SCG3-202ENST00000542355 GOLGA8BA8MQT2 603 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 PPIP5K2O43314 1243 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 PPFIA3O75145 1194 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 SBK1Q52WX2 424 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 MAPKAPK5Q8IW41 473 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 RTKN2Q8IZC4 609 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 ESR2Q92731 530 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 CHAMP1Q96JM3 812 aa12.94□□□□□ -0.34
SCG3-202ENST00000542355 GAKO14976 1311 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 LAMA4Q16363 1823 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 PSDA5PKW4 1024 aaPredicted RBP12.93□□□□□ -0.34
SCG3-202ENST00000542355 DDX11L8A8MPP1 907 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 RANBP6O60518 1105 aaKnown RBP12.93□□□□□ -0.34
SCG3-202ENST00000542355 ZMYND10O75800 440 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 PLCG2P16885 1265 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 SCNN1DP51172 638 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 MCTP1Q6DN14 999 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 NFXL1Q6ZNB6 911 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 CERS3Q8IU89 383 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 TEX11Q8IYF3 940 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 LLPHQ9BRT6 129 aaKnown RBP12.93□□□□□ -0.34
SCG3-202ENST00000542355 LY9Q9HBG7 655 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 PIM2Q9P1W9 311 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 HPS5Q9UPZ3 1129 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 DAGLAQ9Y4D2 1042 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 CTDNEP1O95476 244 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 SLC3A2P08195 630 aaKnown RBP12.93□□□□□ -0.34
SCG3-202ENST00000542355 ZSCAN22P10073 491 aaPredicted RBP12.93□□□□□ -0.34
SCG3-202ENST00000542355 RHBDL3P58872 404 aa12.93□□□□□ -0.34
SCG3-202ENST00000542355 SART3Q15020 963 aaKnown RBP12.93□□□□□ -0.34
SCG3-202ENST00000542355 FOXD4L6Q3SYB3 417 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms