RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 GPR75-ASB3A0A0A6YYF3 556 aa19.24■□□□□ 0.67
VPS33A-206ENST00000542310 IGSF3O75054 1194 aa19.24■□□□□ 0.67
VPS33A-206ENST00000542310 ARHGEF6Q15052 776 aa19.24■□□□□ 0.67
VPS33A-206ENST00000542310 TNNI3KQ59H18 835 aa19.24■□□□□ 0.67
VPS33A-206ENST00000542310 FPGT-TNNI3KV9GXZ4 949 aa19.24■□□□□ 0.67
VPS33A-206ENST00000542310 PDE4DIPQ5VU43 2346 aa19.24■□□□□ 0.67
VPS33A-206ENST00000542310 ATAD5Q96QE3 1844 aa19.23■□□□□ 0.67
VPS33A-206ENST00000542310 BTBD19C9JJ37 291 aa19.23■□□□□ 0.67
VPS33A-206ENST00000542310 ZBTB7BO15156 539 aaPredicted RBP19.23■□□□□ 0.67
VPS33A-206ENST00000542310 LDHCP07864 332 aa19.23■□□□□ 0.67
VPS33A-206ENST00000542310 RLBP1P12271 317 aa19.23■□□□□ 0.67
VPS33A-206ENST00000542310 MCAMP43121 646 aa19.23■□□□□ 0.67
VPS33A-206ENST00000542310 MAP3K10Q02779 954 aa19.23■□□□□ 0.67
VPS33A-206ENST00000542310 ZNF384Q8TF68 577 aa19.23■□□□□ 0.67
VPS33A-206ENST00000542310 NSUN4Q96CB9 384 aaKnown RBP19.23■□□□□ 0.67
VPS33A-206ENST00000542310 EFCC1Q9HA90 598 aa19.23■□□□□ 0.67
VPS33A-206ENST00000542310 NOP58Q9Y2X3 529 aaKnown RBP19.23■□□□□ 0.67
VPS33A-206ENST00000542310 MYO5AQ9Y4I1 1855 aaKnown RBP19.22■□□□□ 0.67
VPS33A-206ENST00000542310 TLR2O60603 784 aa19.22■□□□□ 0.67
VPS33A-206ENST00000542310 RHBDL3P58872 404 aa19.22■□□□□ 0.67
VPS33A-206ENST00000542310 OS9Q13438 667 aaPredicted RBP19.22■□□□□ 0.67
VPS33A-206ENST00000542310 PI16Q6UXB8 463 aa19.22■□□□□ 0.67
VPS33A-206ENST00000542310 ANKRD23Q86SG2 305 aa19.22■□□□□ 0.67
VPS33A-206ENST00000542310 ZFPM1Q8IX07 1006 aa19.22■□□□□ 0.67
VPS33A-206ENST00000542310 ZNF512BQ96KM6 892 aaPredicted RBP19.22■□□□□ 0.67
VPS33A-206ENST00000542310 DDX4Q9NQI0 724 aaKnown RBP19.22■□□□□ 0.67
VPS33A-206ENST00000542310 PTPN22Q9Y2R2 807 aa19.22■□□□□ 0.67
VPS33A-206ENST00000542310 CENPFP49454 3210 aa19.21■□□□□ 0.67
VPS33A-206ENST00000542310 SCYL3Q8IZE3 742 aa19.21■□□□□ 0.67
VPS33A-206ENST00000542310 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.21■□□□□ 0.67
VPS33A-206ENST00000542310 C1orf115Q9H7X2 142 aa19.21■□□□□ 0.67
VPS33A-206ENST00000542310 ZSWIM8A7E2V4 1837 aa19.21■□□□□ 0.67
VPS33A-206ENST00000542310 PHF20L1A8MW92 1017 aa19.2■□□□□ 0.66
VPS33A-206ENST00000542310 SURF6O75683 361 aaKnown RBP19.2■□□□□ 0.66
VPS33A-206ENST00000542310 CCDC158Q5M9N0 1113 aa19.2■□□□□ 0.66
VPS33A-206ENST00000542310 TTC39AQ5SRH9 613 aa19.2■□□□□ 0.66
VPS33A-206ENST00000542310 SH3BP5LQ7L8J4 393 aa19.2■□□□□ 0.66
VPS33A-206ENST00000542310 ZSCAN29Q8IWY8 852 aaPredicted RBP19.2■□□□□ 0.66
VPS33A-206ENST00000542310 SIPA1L1O43166 1804 aa19.19■□□□□ 0.66
VPS33A-206ENST00000542310 DDTLA6NHG4 134 aaPredicted RBP19.19■□□□□ 0.66
VPS33A-206ENST00000542310 CXCL11O14625 94 aa19.19■□□□□ 0.66
VPS33A-206ENST00000542310 TBC1D12O60347 775 aa19.19■□□□□ 0.66
VPS33A-206ENST00000542310 MS4A1P11836 297 aa19.19■□□□□ 0.66
VPS33A-206ENST00000542310 PICALMQ13492 652 aa19.19■□□□□ 0.66
VPS33A-206ENST00000542310 ARMC5Q96C12 935 aa19.19■□□□□ 0.66
VPS33A-206ENST00000542310 DBNDD2Q9BQY9 259 aa19.19■□□□□ 0.66
VPS33A-206ENST00000542310 PICK1Q9NRD5 415 aa19.19■□□□□ 0.66
VPS33A-206ENST00000542310 RAI14Q9P0K7 980 aa19.19■□□□□ 0.66
VPS33A-206ENST00000542310 LOC285556D6RIA3 1793 aa19.19■□□□□ 0.66
VPS33A-206ENST00000542310 GNRH1P01148 92 aa19.18■□□□□ 0.66
VPS33A-206ENST00000542310 CEP85Q6P2H3 762 aa19.18■□□□□ 0.66
VPS33A-206ENST00000542310 TBC1D9Q6ZT07 1266 aa19.18■□□□□ 0.66
VPS33A-206ENST00000542310 LRP2BPQ9P2M1 347 aa19.18■□□□□ 0.66
VPS33A-206ENST00000542310 ADGRA2Q96PE1 1338 aa19.18■□□□□ 0.66
VPS33A-206ENST00000542310 MGAMO43451 1857 aa19.18■□□□□ 0.66
VPS33A-206ENST00000542310 CTNND1O60716 968 aaKnown RBP19.17■□□□□ 0.66
VPS33A-206ENST00000542310 LACTBP83111 547 aaPredicted RBP19.17■□□□□ 0.66
VPS33A-206ENST00000542310 CAP1Q01518 475 aa19.17■□□□□ 0.66
VPS33A-206ENST00000542310 MOGSQ13724 837 aa19.17■□□□□ 0.66
VPS33A-206ENST00000542310 KIF22Q14807 665 aa19.17■□□□□ 0.66
VPS33A-206ENST00000542310 NOL10Q9BSC4 688 aaKnown RBP19.17■□□□□ 0.66
VPS33A-206ENST00000542310 OSBPL5Q9H0X9 879 aaPredicted RBP19.17■□□□□ 0.66
VPS33A-206ENST00000542310 A0A0G2JLL6 359 aaPredicted RBP19.16■□□□□ 0.66
VPS33A-206ENST00000542310 PDHXO00330 501 aa19.16■□□□□ 0.66
VPS33A-206ENST00000542310 PLCG2P16885 1265 aa19.16■□□□□ 0.66
VPS33A-206ENST00000542310 PTPRAP18433 802 aa19.16■□□□□ 0.66
VPS33A-206ENST00000542310 PRRT2Q7Z6L0 340 aaPredicted RBP19.16■□□□□ 0.66
VPS33A-206ENST00000542310 ERC1Q8IUD2 1116 aa19.16■□□□□ 0.66
VPS33A-206ENST00000542310 PARK7Q99497 189 aaKnown RBP19.16■□□□□ 0.66
VPS33A-206ENST00000542310 DBNLQ9UJU6 430 aaKnown RBP19.16■□□□□ 0.66
VPS33A-206ENST00000542310 BRCA2P51587 3418 aa19.15■□□□□ 0.66
VPS33A-206ENST00000542310 BAG3O95817 575 aa19.15■□□□□ 0.66
VPS33A-206ENST00000542310 PRMT2P55345 433 aa19.15■□□□□ 0.66
VPS33A-206ENST00000542310 NAA16Q6N069 864 aaPredicted RBP19.15■□□□□ 0.66
VPS33A-206ENST00000542310 C17orf99Q6UX52 265 aa19.15■□□□□ 0.66
VPS33A-206ENST00000542310 FASTKD5Q7L8L6 764 aaKnown RBP19.15■□□□□ 0.66
VPS33A-206ENST00000542310 TEX11Q8IYF3 940 aa19.15■□□□□ 0.66
VPS33A-206ENST00000542310 SLC45A1Q9Y2W3 748 aa19.15■□□□□ 0.66
VPS33A-206ENST00000542310 KIAA0100Q14667 2235 aaKnown RBP19.15■□□□□ 0.66
VPS33A-206ENST00000542310 CYP2E1P05181 493 aaPredicted RBP19.14■□□□□ 0.65
VPS33A-206ENST00000542310 TMED8Q6PL24 325 aaPredicted RBP19.14■□□□□ 0.65
VPS33A-206ENST00000542310 PANK1Q8TE04 598 aa19.14■□□□□ 0.65
VPS33A-206ENST00000542310 TBC1D2Q9BYX2 928 aa19.14■□□□□ 0.65
VPS33A-206ENST00000542310 AFG3L2Q9Y4W6 797 aa19.14■□□□□ 0.65
VPS33A-206ENST00000542310 ZHX2Q9Y6X8 837 aa19.14■□□□□ 0.65
VPS33A-206ENST00000542310 PPP4CP60510 307 aa19.13■□□□□ 0.65
VPS33A-206ENST00000542310 HSP90AB4PQ58FF6 505 aa19.13■□□□□ 0.65
VPS33A-206ENST00000542310 DHX36Q9H2U1 1008 aaKnown RBP19.13■□□□□ 0.65
VPS33A-206ENST00000542310 SNRKQ9NRH2 765 aa19.13■□□□□ 0.65
VPS33A-206ENST00000542310 HERC5Q9UII4 1024 aaKnown RBP19.13■□□□□ 0.65
VPS33A-206ENST00000542310 MYH1P12882 1939 aa19.13■□□□□ 0.65
VPS33A-206ENST00000542310 ZAP70P43403 619 aa19.12■□□□□ 0.65
VPS33A-206ENST00000542310 SLC9C1Q4G0N8 1177 aa19.12■□□□□ 0.65
VPS33A-206ENST00000542310 GPAT2Q6NUI2 795 aa19.12■□□□□ 0.65
VPS33A-206ENST00000542310 CERS3Q8IU89 383 aa19.12■□□□□ 0.65
VPS33A-206ENST00000542310 SH3RF3Q8TEJ3 882 aaPredicted RBP19.12■□□□□ 0.65
VPS33A-206ENST00000542310 EAF2Q96CJ1 260 aaPredicted RBP19.12■□□□□ 0.65
VPS33A-206ENST00000542310 ZNF333Q96JL9 665 aa19.12■□□□□ 0.65
VPS33A-206ENST00000542310 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.12■□□□□ 0.65
VPS33A-206ENST00000542310 TLR7Q9NYK1 1049 aaKnown RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms