RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 HDAC1Q13547 482 aaPredicted RBP15.69■□□□□ 0.1
TRPM1-203ENST00000542188 TMTC1Q8IUR5 882 aa15.69■□□□□ 0.1
TRPM1-203ENST00000542188 SIRT1Q96EB6 747 aa15.69■□□□□ 0.1
TRPM1-203ENST00000542188 STK24Q9Y6E0 443 aa15.69■□□□□ 0.1
TRPM1-203ENST00000542188 CYP7A1P22680 504 aa15.69■□□□□ 0.1
TRPM1-203ENST00000542188 CCT6AP40227 531 aaKnown RBP15.69■□□□□ 0.1
TRPM1-203ENST00000542188 BRD3Q15059 726 aa15.69■□□□□ 0.1
TRPM1-203ENST00000542188 PAXIP1Q6ZW49 1069 aaPredicted RBP15.69■□□□□ 0.1
TRPM1-203ENST00000542188 NLRP7Q8WX94 980 aa15.69■□□□□ 0.1
TRPM1-203ENST00000542188 ZRANB1Q9UGI0 708 aa15.69■□□□□ 0.1
TRPM1-203ENST00000542188 NCOA2Q15596 1464 aa15.68■□□□□ 0.1
TRPM1-203ENST00000542188 TRAF5O00463 557 aa15.68■□□□□ 0.1
TRPM1-203ENST00000542188 RGS16O15492 202 aaPredicted RBP15.68■□□□□ 0.1
TRPM1-203ENST00000542188 PHBP35232 272 aa15.68■□□□□ 0.1
TRPM1-203ENST00000542188 SDSP20132 328 aa15.68■□□□□ 0.1
TRPM1-203ENST00000542188 HOMER3Q9NSC5 361 aa15.68■□□□□ 0.1
TRPM1-203ENST00000542188 VGLL3A8MV65 326 aa15.68■□□□□ 0.1
TRPM1-203ENST00000542188 RNF8O76064 485 aa15.68■□□□□ 0.1
TRPM1-203ENST00000542188 MX2P20592 715 aa15.68■□□□□ 0.1
TRPM1-203ENST00000542188 BIRC3Q13489 604 aa15.68■□□□□ 0.1
TRPM1-203ENST00000542188 THUMPD2Q9BTF0 503 aaKnown RBP15.68■□□□□ 0.1
TRPM1-203ENST00000542188 RABEP2Q9H5N1 569 aa15.68■□□□□ 0.1
TRPM1-203ENST00000542188 CEP104O60308 925 aa15.68■□□□□ 0.1
TRPM1-203ENST00000542188 AKNAD1Q5T1N1 836 aa15.68■□□□□ 0.1
TRPM1-203ENST00000542188 SND1Q7KZF4 910 aaKnown RBP eCLIP15.68■□□□□ 0.1
TRPM1-203ENST00000542188 EXOC7Q9UPT5 735 aa15.68■□□□□ 0.1
TRPM1-203ENST00000542188 KRT71Q3SY84 523 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 INTS4Q96HW7 963 aaKnown RBP15.67■□□□□ 0.1
TRPM1-203ENST00000542188 TRIM31Q9BZY9 425 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 VPS37BQ9H9H4 285 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 RHPN1Q8TCX5 695 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 IQCDQ96DY2 449 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 GOLGA8QA0A0J9YX86 632 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 GOLGA8OA6NCC3 632 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 GOLGA8NF8WBI6 632 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 GNGT1P63211 74 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 VTI1AQ96AJ9 217 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 ZNF644Q9H582 1327 aaPredicted RBP15.67■□□□□ 0.1
TRPM1-203ENST00000542188 CAMSAP2Q08AD1 1489 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 TTC4O95801 387 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 APOEP02649 317 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 CCDC105Q8IYK2 499 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 TBC1D8O95759 1140 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 ARHGAP4P98171 946 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 FCHSD1Q86WN1 690 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 KLHL7Q8IXQ5 586 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 SMC5Q8IY18 1101 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 LRGUKQ96M69 825 aa15.67■□□□□ 0.1
TRPM1-203ENST00000542188 MRPL46Q9H2W6 279 aaKnown RBP15.67■□□□□ 0.1
TRPM1-203ENST00000542188 TNNI2P48788 182 aa15.66■□□□□ 0.1
TRPM1-203ENST00000542188 CDR2Q01850 454 aa15.66■□□□□ 0.1
TRPM1-203ENST00000542188 LRRC2Q9BYS8 371 aa15.66■□□□□ 0.1
TRPM1-203ENST00000542188 MAN1A1P33908 653 aa15.66■□□□□ 0.1
TRPM1-203ENST00000542188 PLS1Q14651 629 aa15.66■□□□□ 0.1
TRPM1-203ENST00000542188 PALM3A6NDB9 673 aaPredicted RBP15.66■□□□□ 0.1
TRPM1-203ENST00000542188 EVI5O60447 810 aa15.66■□□□□ 0.1
TRPM1-203ENST00000542188 CCDC152Q4G0S7 254 aa15.66■□□□□ 0.1
TRPM1-203ENST00000542188 PEX19P40855 299 aa15.66■□□□□ 0.1
TRPM1-203ENST00000542188 RPS6KA1Q15418 735 aa15.66■□□□□ 0.1
TRPM1-203ENST00000542188 TRIM6Q9C030 488 aaPredicted RBP15.66■□□□□ 0.1
TRPM1-203ENST00000542188 CTTNBP2NLQ9P2B4 639 aa15.66■□□□□ 0.1
TRPM1-203ENST00000542188 SYNRGQ9UMZ2 1314 aa15.66■□□□□ 0.1
TRPM1-203ENST00000542188 SMTNP53814 917 aa15.65■□□□□ 0.1
TRPM1-203ENST00000542188 CASC4Q6P4E1 433 aa15.65■□□□□ 0.1
TRPM1-203ENST00000542188 ANKRD42Q8N9B4 389 aa15.65■□□□□ 0.1
TRPM1-203ENST00000542188 CFAP61Q8NHU2 1237 aa15.65■□□□□ 0.1
TRPM1-203ENST00000542188 SPDL1Q96EA4 605 aa15.65■□□□□ 0.1
TRPM1-203ENST00000542188 WDR97A6NE52 1622 aa15.65■□□□□ 0.1
TRPM1-203ENST00000542188 RNASE9P60153 205 aaKnown RBP15.65■□□□□ 0.1
TRPM1-203ENST00000542188 MUM1L1Q5H9M0 696 aa15.65■□□□□ 0.1
TRPM1-203ENST00000542188 ESRRGP62508 458 aa15.65■□□□□ 0.1
TRPM1-203ENST00000542188 PPP2R5CQ13362 524 aa15.65■□□□□ 0.1
TRPM1-203ENST00000542188 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.65■□□□□ 0.1
TRPM1-203ENST00000542188 ARHGAP6O43182 974 aa15.65■□□□□ 0.1
TRPM1-203ENST00000542188 CCDC13Q8IYE1 715 aa15.65■□□□□ 0.1
TRPM1-203ENST00000542188 GRK7Q8WTQ7 553 aa15.65■□□□□ 0.1
TRPM1-203ENST00000542188 MGARPQ8TDB4 240 aa15.64■□□□□ 0.1
TRPM1-203ENST00000542188 NUCKS1Q9H1E3 243 aaKnown RBP15.64■□□□□ 0.1
TRPM1-203ENST00000542188 SLC52A1Q9NWF4 448 aa15.64■□□□□ 0.1
TRPM1-203ENST00000542188 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.64■□□□□ 0.1
TRPM1-203ENST00000542188 PTPDC1A2A3K4 754 aa15.64■□□□□ 0.09
TRPM1-203ENST00000542188 LRRC23Q53EV4 343 aaPredicted RBP15.64■□□□□ 0.09
TRPM1-203ENST00000542188 JADE1Q6IE81 842 aa15.64■□□□□ 0.09
TRPM1-203ENST00000542188 PDE4DQ08499 809 aa15.64■□□□□ 0.09
TRPM1-203ENST00000542188 PPP2R5EQ16537 467 aa15.64■□□□□ 0.09
TRPM1-203ENST00000542188 LCA5Q86VQ0 697 aa15.64■□□□□ 0.09
TRPM1-203ENST00000542188 HELBQ8NG08 1087 aaPredicted RBP15.64■□□□□ 0.09
TRPM1-203ENST00000542188 IL16Q14005 1332 aa15.64■□□□□ 0.09
TRPM1-203ENST00000542188 CTNNA1P35221 906 aaKnown RBP15.64■□□□□ 0.09
TRPM1-203ENST00000542188 SERPINB6P35237 376 aa15.64■□□□□ 0.09
TRPM1-203ENST00000542188 KIF11P52732 1056 aa15.64■□□□□ 0.09
TRPM1-203ENST00000542188 NXNQ6DKJ4 435 aa15.64■□□□□ 0.09
TRPM1-203ENST00000542188 GOLGA5Q8TBA6 731 aa15.64■□□□□ 0.09
TRPM1-203ENST00000542188 FANCCQ00597 558 aa15.64■□□□□ 0.09
TRPM1-203ENST00000542188 VPS16Q9H269 839 aa15.64■□□□□ 0.09
TRPM1-203ENST00000542188 EFCC1Q9HA90 598 aa15.64■□□□□ 0.09
TRPM1-203ENST00000542188 MAGEB6P1A0A0J9YX57 407 aa15.63■□□□□ 0.09
TRPM1-203ENST00000542188 FLOT1O75955 427 aa15.63■□□□□ 0.09
TRPM1-203ENST00000542188 PPP2R5DQ14738 602 aa15.63■□□□□ 0.09
TRPM1-203ENST00000542188 SKAP1Q86WV1 359 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms