RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 TBC1D12O60347 775 aa18.44■□□□□ 0.54
ITM2C-208ENST00000541852 PSMC4P43686 418 aa18.44■□□□□ 0.54
ITM2C-208ENST00000541852 TFCP2Q12800 502 aa18.44■□□□□ 0.54
ITM2C-208ENST00000541852 G3BP1Q13283 466 aaKnown RBP eCLIP18.44■□□□□ 0.54
ITM2C-208ENST00000541852 ATF7IPQ6VMQ6 1270 aa18.44■□□□□ 0.54
ITM2C-208ENST00000541852 SCYL3Q8IZE3 742 aa18.44■□□□□ 0.54
ITM2C-208ENST00000541852 NEUROD6Q96NK8 337 aa18.44■□□□□ 0.54
ITM2C-208ENST00000541852 SLC45A1Q9Y2W3 748 aa18.44■□□□□ 0.54
ITM2C-208ENST00000541852 MYH2Q9UKX2 1941 aa18.44■□□□□ 0.54
ITM2C-208ENST00000541852 GPR75-ASB3A0A0A6YYF3 556 aa18.43■□□□□ 0.54
ITM2C-208ENST00000541852 FMNL1O95466 1100 aaPredicted RBP18.43■□□□□ 0.54
ITM2C-208ENST00000541852 ZFPM1Q8IX07 1006 aa18.43■□□□□ 0.54
ITM2C-208ENST00000541852 SRRDQ9UH36 339 aa18.43■□□□□ 0.54
ITM2C-208ENST00000541852 CPA4Q9UI42 421 aa18.43■□□□□ 0.54
ITM2C-208ENST00000541852 ZHX2Q9Y6X8 837 aa18.43■□□□□ 0.54
ITM2C-208ENST00000541852 MROH7-TTC4A0A0A0MT08 1334 aa18.43■□□□□ 0.54
ITM2C-208ENST00000541852 IGSF3O75054 1194 aa18.42■□□□□ 0.54
ITM2C-208ENST00000541852 UQCRFS1P1P0C7P4 283 aa18.42■□□□□ 0.54
ITM2C-208ENST00000541852 CAPN2P17655 700 aa18.42■□□□□ 0.54
ITM2C-208ENST00000541852 PTPRAP18433 802 aa18.42■□□□□ 0.54
ITM2C-208ENST00000541852 MOGSQ13724 837 aa18.42■□□□□ 0.54
ITM2C-208ENST00000541852 NKX2-3Q8TAU0 364 aa18.42■□□□□ 0.54
ITM2C-208ENST00000541852 AFG3L2Q9Y4W6 797 aa18.42■□□□□ 0.54
ITM2C-208ENST00000541852 A0A0G2JLL6 359 aaPredicted RBP18.41■□□□□ 0.54
ITM2C-208ENST00000541852 BTDP43251 543 aa18.41■□□□□ 0.54
ITM2C-208ENST00000541852 MECOMQ03112 1051 aa18.41■□□□□ 0.54
ITM2C-208ENST00000541852 PRRT2Q7Z6L0 340 aaPredicted RBP18.41■□□□□ 0.54
ITM2C-208ENST00000541852 SPATA5Q8NB90 893 aa18.41■□□□□ 0.54
ITM2C-208ENST00000541852 RAET1EQ8TD07 263 aa18.41■□□□□ 0.54
ITM2C-208ENST00000541852 TRIM47Q96LD4 638 aa18.41■□□□□ 0.54
ITM2C-208ENST00000541852 TBC1D2Q9BYX2 928 aa18.41■□□□□ 0.54
ITM2C-208ENST00000541852 ARHGAP39Q9C0H5 1083 aa18.41■□□□□ 0.54
ITM2C-208ENST00000541852 TRIM27P14373 513 aa18.4■□□□□ 0.54
ITM2C-208ENST00000541852 FCGRTP55899 365 aa18.4■□□□□ 0.54
ITM2C-208ENST00000541852 GPAT2Q6NUI2 795 aa18.4■□□□□ 0.54
ITM2C-208ENST00000541852 HMG20BQ9P0W2 317 aa18.4■□□□□ 0.54
ITM2C-208ENST00000541852 ATRNL1Q5VV63 1379 aa18.4■□□□□ 0.54
ITM2C-208ENST00000541852 BRCA2P51587 3418 aa18.39■□□□□ 0.54
ITM2C-208ENST00000541852 DDTLA6NHG4 134 aaPredicted RBP18.39■□□□□ 0.53
ITM2C-208ENST00000541852 BCRP11274 1271 aa18.39■□□□□ 0.53
ITM2C-208ENST00000541852 ARID4AP29374 1257 aaPredicted RBP18.39■□□□□ 0.53
ITM2C-208ENST00000541852 GRK4P32298 578 aa18.39■□□□□ 0.53
ITM2C-208ENST00000541852 SH3BP5LQ7L8J4 393 aa18.39■□□□□ 0.53
ITM2C-208ENST00000541852 SH3TC2Q8TF17 1288 aa18.39■□□□□ 0.53
ITM2C-208ENST00000541852 FRAT1Q92837 279 aaPredicted RBP18.39■□□□□ 0.53
ITM2C-208ENST00000541852 GPR108Q9NPR9 543 aa18.39■□□□□ 0.53
ITM2C-208ENST00000541852 ADGRA2Q96PE1 1338 aa18.39■□□□□ 0.53
ITM2C-208ENST00000541852 OSBPP22059 807 aa18.38■□□□□ 0.53
ITM2C-208ENST00000541852 RHBDL3P58872 404 aa18.38■□□□□ 0.53
ITM2C-208ENST00000541852 UBXN2AP68543 259 aa18.38■□□□□ 0.53
ITM2C-208ENST00000541852 PICALMQ13492 652 aa18.38■□□□□ 0.53
ITM2C-208ENST00000541852 NSUN4Q96CB9 384 aaKnown RBP18.38■□□□□ 0.53
ITM2C-208ENST00000541852 NOL10Q9BSC4 688 aaKnown RBP18.38■□□□□ 0.53
ITM2C-208ENST00000541852 OSBPL5Q9H0X9 879 aaPredicted RBP18.38■□□□□ 0.53
ITM2C-208ENST00000541852 LRP2BPQ9P2M1 347 aa18.38■□□□□ 0.53
ITM2C-208ENST00000541852 BAG3O95817 575 aa18.37■□□□□ 0.53
ITM2C-208ENST00000541852 PLCG2P16885 1265 aa18.37■□□□□ 0.53
ITM2C-208ENST00000541852 CCDC158Q5M9N0 1113 aa18.37■□□□□ 0.53
ITM2C-208ENST00000541852 ZKSCAN2Q63HK3 967 aa18.37■□□□□ 0.53
ITM2C-208ENST00000541852 GADL1Q6ZQY3 521 aa18.37■□□□□ 0.53
ITM2C-208ENST00000541852 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.37■□□□□ 0.53
ITM2C-208ENST00000541852 DDX4Q9NQI0 724 aaKnown RBP18.37■□□□□ 0.53
ITM2C-208ENST00000541852 RAI14Q9P0K7 980 aa18.37■□□□□ 0.53
ITM2C-208ENST00000541852 MYPNQ86TC9 1320 aa18.37■□□□□ 0.53
ITM2C-208ENST00000541852 RFX7Q2KHR2 1363 aa18.37■□□□□ 0.53
ITM2C-208ENST00000541852 BCAR3O75815 825 aa18.36■□□□□ 0.53
ITM2C-208ENST00000541852 CYP2C8P10632 490 aa18.36■□□□□ 0.53
ITM2C-208ENST00000541852 HABP4Q5JVS0 413 aaKnown RBP18.36■□□□□ 0.53
ITM2C-208ENST00000541852 SLAIN1Q8ND83 568 aa18.36■□□□□ 0.53
ITM2C-208ENST00000541852 DHX36Q9H2U1 1008 aaKnown RBP18.36■□□□□ 0.53
ITM2C-208ENST00000541852 BIN2Q9UBW5 565 aaPredicted RBP18.36■□□□□ 0.53
ITM2C-208ENST00000541852 HERC5Q9UII4 1024 aaKnown RBP18.36■□□□□ 0.53
ITM2C-208ENST00000541852 PNMA3Q9UL41 463 aa18.36■□□□□ 0.53
ITM2C-208ENST00000541852 PNMA6EA0A0J9YXQ4 647 aa18.35■□□□□ 0.53
ITM2C-208ENST00000541852 GJB1P08034 283 aa18.35■□□□□ 0.53
ITM2C-208ENST00000541852 CTGFP29279 349 aa18.35■□□□□ 0.53
ITM2C-208ENST00000541852 PABPC4Q13310 644 aaKnown RBP eCLIP18.35■□□□□ 0.53
ITM2C-208ENST00000541852 PROCA1Q8NCQ7 364 aaPredicted RBP18.35■□□□□ 0.53
ITM2C-208ENST00000541852 SMCR8Q8TEV9 937 aaPredicted RBP18.35■□□□□ 0.53
ITM2C-208ENST00000541852 PI4KBQ9UBF8 816 aa18.35■□□□□ 0.53
ITM2C-208ENST00000541852 AGTPBP1Q9UPW5 1226 aa18.35■□□□□ 0.53
ITM2C-208ENST00000541852 DOCK2Q92608 1830 aa18.35■□□□□ 0.53
ITM2C-208ENST00000541852 COL2A1P02458 1487 aaPredicted RBP18.34■□□□□ 0.53
ITM2C-208ENST00000541852 MYCP01106 439 aaPredicted RBP18.34■□□□□ 0.53
ITM2C-208ENST00000541852 GJA8P48165 433 aa18.34■□□□□ 0.53
ITM2C-208ENST00000541852 ATP8B2P98198 1209 aa18.34■□□□□ 0.53
ITM2C-208ENST00000541852 TBC1D9Q6ZT07 1266 aa18.34■□□□□ 0.53
ITM2C-208ENST00000541852 ZNF384Q8TF68 577 aa18.34■□□□□ 0.53
ITM2C-208ENST00000541852 CLUAP1Q96AJ1 413 aa18.34■□□□□ 0.53
ITM2C-208ENST00000541852 ZNF512BQ96KM6 892 aaPredicted RBP18.34■□□□□ 0.53
ITM2C-208ENST00000541852 TRIM75PA6NK02 468 aa18.33■□□□□ 0.52
ITM2C-208ENST00000541852 MCAMP43121 646 aa18.33■□□□□ 0.52
ITM2C-208ENST00000541852 GCLCP48506 637 aaPredicted RBP18.33■□□□□ 0.52
ITM2C-208ENST00000541852 OS9Q13438 667 aaPredicted RBP18.33■□□□□ 0.52
ITM2C-208ENST00000541852 POLA2Q14181 598 aa18.33■□□□□ 0.52
ITM2C-208ENST00000541852 TTC39AQ5SRH9 613 aa18.33■□□□□ 0.52
ITM2C-208ENST00000541852 TEX11Q8IYF3 940 aa18.33■□□□□ 0.52
ITM2C-208ENST00000541852 ZNF280CQ8ND82 737 aa18.33■□□□□ 0.52
ITM2C-208ENST00000541852 SSH3Q8TE77 659 aa18.33■□□□□ 0.52
ITM2C-208ENST00000541852 PXYLP1Q8TE99 480 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms