RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 USP17L3A6NCW0 530 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 USP17L4A6NCW7 530 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 PRC1O43663 620 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 USP5P45974 858 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 USP17L1Q7RTZ2 530 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 STAG1Q8WVM7 1258 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 AGXT2Q9BYV1 514 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 CNNM2Q9H8M5 875 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 FAM13BQ9NYF5 915 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 ANAPC4Q9UJX5 808 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 WDR19Q8NEZ3 1342 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 USP17L12C9JPN9 530 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 USP17L21D6R901 530 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 PLCG2P16885 1265 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 ANTXR2P58335 489 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 FKBP1AP62942 108 aaKnown RBP10.23□□□□□ -0.77
THBS3-210ENST00000541576 CTR9Q6PD62 1173 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 LARGE2Q8N3Y3 721 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 TNPO1Q92973 898 aaKnown RBP10.23□□□□□ -0.77
THBS3-210ENST00000541576 ZNF277Q9NRM2 450 aaPredicted RBP10.23□□□□□ -0.77
THBS3-210ENST00000541576 ZDHHC9Q9Y397 364 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 DAGLAQ9Y4D2 1042 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.23□□□□□ -0.77
THBS3-210ENST00000541576 TIAM2Q8IVF5 1701 aa10.23□□□□□ -0.77
THBS3-210ENST00000541576 B4E1Z4 1266 aa10.22□□□□□ -0.77
THBS3-210ENST00000541576 DACT2Q5SW24 774 aa10.22□□□□□ -0.77
THBS3-210ENST00000541576 FBXL16Q8N461 479 aa10.22□□□□□ -0.77
THBS3-210ENST00000541576 KRT23Q9C075 422 aa10.22□□□□□ -0.77
THBS3-210ENST00000541576 TOMM22Q9NS69 142 aa10.22□□□□□ -0.77
THBS3-210ENST00000541576 ARPP21Q9UBL0 812 aaPredicted RBP10.22□□□□□ -0.77
THBS3-210ENST00000541576 BRCA1P38398 1863 aaKnown RBP10.22□□□□□ -0.77
THBS3-210ENST00000541576 CYP2D7A0A087X1C5 515 aa10.22□□□□□ -0.77
THBS3-210ENST00000541576 ESPNB1AK53 854 aa10.22□□□□□ -0.77
THBS3-210ENST00000541576 NCLP19338 710 aaKnown RBP10.22□□□□□ -0.77
THBS3-210ENST00000541576 MCM4P33991 863 aa10.22□□□□□ -0.77
THBS3-210ENST00000541576 STK3Q13188 491 aa10.22□□□□□ -0.77
THBS3-210ENST00000541576 STK11IPQ8N1F8 1099 aa10.22□□□□□ -0.77
THBS3-210ENST00000541576 VPS33BQ9H267 617 aa10.22□□□□□ -0.77
THBS3-210ENST00000541576 MCM9Q9NXL9 1143 aa10.22□□□□□ -0.77
THBS3-210ENST00000541576 RRP9O43818 475 aaKnown RBP10.22□□□□□ -0.77
THBS3-210ENST00000541576 SCNN1DP51172 638 aa10.22□□□□□ -0.77
THBS3-210ENST00000541576 RRP12Q5JTH9 1297 aaKnown RBP10.22□□□□□ -0.77
THBS3-210ENST00000541576 TEX11Q8IYF3 940 aa10.22□□□□□ -0.77
THBS3-210ENST00000541576 TGFBRAP1Q8WUH2 860 aa10.22□□□□□ -0.77
THBS3-210ENST00000541576 YDJCA8MPS7 323 aa10.21□□□□□ -0.77
THBS3-210ENST00000541576 KDM4AO75164 1064 aa10.21□□□□□ -0.77
THBS3-210ENST00000541576 RHBDL3P58872 404 aa10.21□□□□□ -0.77
THBS3-210ENST00000541576 APOBRQ0VD83 1088 aa10.21□□□□□ -0.77
THBS3-210ENST00000541576 SBK1Q52WX2 424 aa10.21□□□□□ -0.77
THBS3-210ENST00000541576 CYB5R4Q7L1T6 521 aa10.21□□□□□ -0.77
THBS3-210ENST00000541576 KIAA0825Q8IV33 1275 aa10.21□□□□□ -0.77
THBS3-210ENST00000541576 TEKT1Q969V4 418 aa10.21□□□□□ -0.77
THBS3-210ENST00000541576 SPON1Q9HCB6 807 aa10.21□□□□□ -0.77
THBS3-210ENST00000541576 MKRN1Q9UHC7 482 aaKnown RBP10.21□□□□□ -0.77
THBS3-210ENST00000541576 BCS1LQ9Y276 419 aa10.21□□□□□ -0.77
THBS3-210ENST00000541576 NUCB2P80303 420 aa10.21□□□□□ -0.78
THBS3-210ENST00000541576 EVX2Q03828 476 aa10.21□□□□□ -0.78
THBS3-210ENST00000541576 TPRNQ4KMQ1 711 aa10.21□□□□□ -0.78
THBS3-210ENST00000541576 HHIPL2Q6UWX4 724 aa10.21□□□□□ -0.78
THBS3-210ENST00000541576 TAOK3Q9H2K8 898 aa10.21□□□□□ -0.78
THBS3-210ENST00000541576 SMC3Q9UQE7 1217 aa10.21□□□□□ -0.78
THBS3-210ENST00000541576 SLC3A2P08195 630 aaKnown RBP10.2□□□□□ -0.78
THBS3-210ENST00000541576 PCP11498 1178 aaKnown RBP10.2□□□□□ -0.78
THBS3-210ENST00000541576 CLCN1P35523 988 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 MAPKAPK5Q8IW41 473 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 AMOTL1Q8IY63 956 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 GTF3C6Q969F1 213 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 ZSWIM5Q9P217 1185 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 USP17L8P0C7I0 530 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 IARSP41252 1262 aaKnown RBP10.2□□□□□ -0.78
THBS3-210ENST00000541576 TMEM87BQ96K49 555 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 PRDM10Q9NQV6 1147 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 NAP1L2Q9ULW6 460 aaPredicted RBP10.2□□□□□ -0.78
THBS3-210ENST00000541576 ANGEL1Q9UNK9 670 aaKnown RBP10.2□□□□□ -0.78
THBS3-210ENST00000541576 CYP2D6P10635 497 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 CRKP46108 304 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 EVCP57679 992 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 FOXD4L5Q5VV16 416 aaPredicted RBP10.2□□□□□ -0.78
THBS3-210ENST00000541576 NIM1KQ8IY84 436 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 FOXD4L4Q8WXT5 416 aaPredicted RBP10.2□□□□□ -0.78
THBS3-210ENST00000541576 ESR2Q92731 530 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 ZNF274Q96GC6 653 aaPredicted RBP10.2□□□□□ -0.78
THBS3-210ENST00000541576 MRIQ9BWK5 157 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 GRPEL1Q9HAV7 217 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 SRCAPQ6ZRS2 3230 aa10.2□□□□□ -0.78
THBS3-210ENST00000541576 LAMB1P07942 1786 aa10.19□□□□□ -0.78
THBS3-210ENST00000541576 SH2B2O14492 632 aaPredicted RBP10.19□□□□□ -0.78
THBS3-210ENST00000541576 PFKFB2O60825 505 aa10.19□□□□□ -0.78
THBS3-210ENST00000541576 HDLBPQ00341 1268 aaKnown RBP10.19□□□□□ -0.78
THBS3-210ENST00000541576 C12orf60Q5U649 245 aa10.19□□□□□ -0.78
THBS3-210ENST00000541576 NLGN2Q8NFZ4 835 aa10.19□□□□□ -0.78
THBS3-210ENST00000541576 ZNF646O15015 1829 aaPredicted RBP10.19□□□□□ -0.78
THBS3-210ENST00000541576 FLT1P17948 1338 aa10.19□□□□□ -0.78
THBS3-210ENST00000541576 NAV1Q8NEY1 1877 aa10.19□□□□□ -0.78
THBS3-210ENST00000541576 FER1L6Q2WGJ9 1857 aa10.19□□□□□ -0.78
THBS3-210ENST00000541576 CDK5RAP2Q96SN8 1893 aa10.19□□□□□ -0.78
THBS3-210ENST00000541576 FGRP09769 529 aa10.19□□□□□ -0.78
THBS3-210ENST00000541576 GJB2P29033 226 aa10.19□□□□□ -0.78
THBS3-210ENST00000541576 PDIA3P30101 505 aaKnown RBP10.19□□□□□ -0.78
THBS3-210ENST00000541576 PDE4BQ07343 736 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms