RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 DKC1O60832 514 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRERF1-205ENST00000541110 NXNQ6DKJ4 435 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 CABLES1Q8TDN4 633 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 VCX3BQ9H321 246 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 EMILIN1Q9Y6C2 1016 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 IRS4O14654 1257 aaPredicted RBP11.17□□□□□ -0.62
TRERF1-205ENST00000541110 HGSO14964 777 aaPredicted RBP11.17□□□□□ -0.62
TRERF1-205ENST00000541110 UBE2HP62256 183 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 ALDH1L2Q3SY69 923 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 COPS6Q7L5N1 327 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 MMS19Q96T76 1030 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 BCS1LQ9Y276 419 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 ATAD2BQ9ULI0 1458 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 C11orf95C9JLR9 678 aaPredicted RBP11.17□□□□□ -0.62
TRERF1-205ENST00000541110 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRERF1-205ENST00000541110 ARHGEF2Q92974 986 aaKnown RBP11.17□□□□□ -0.62
TRERF1-205ENST00000541110 ACBD5Q5T8D3 534 aaPredicted RBP11.17□□□□□ -0.62
TRERF1-205ENST00000541110 ARHGEF16Q5VV41 709 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 DPP8Q6V1X1 898 aaPredicted RBP11.17□□□□□ -0.62
TRERF1-205ENST00000541110 AOPEPQ8N6M6 819 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 GLG1Q92896 1179 aa11.17□□□□□ -0.62
TRERF1-205ENST00000541110 RBM28Q9NW13 759 aaKnown RBP11.17□□□□□ -0.62
TRERF1-205ENST00000541110 BRF1Q92994 677 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 FAM114A2Q9NRY5 505 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 SFMBT1Q9UHJ3 866 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 PLEKHG3A1L390 1219 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 TYW5A2RUC4 315 aaKnown RBP11.16□□□□□ -0.62
TRERF1-205ENST00000541110 GCNT3O95395 438 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 GSTA1P08263 222 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 GSTA2P09210 222 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 SSFA2P28290 1259 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 KARSQ15046 597 aaKnown RBP11.16□□□□□ -0.62
TRERF1-205ENST00000541110 ZSCAN30Q86W11 494 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 UBL4BQ8N7F7 174 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 SSH1Q8WYL5 1049 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 CCDC141Q6ZP82 1450 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 VWA3AA6NCI4 1184 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 MGEA5O60502 916 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 ARHGEF6Q15052 776 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 CCDC122Q5T0U0 273 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 TTC6Q86TZ1 520 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 SPDYE1Q8NFV5 336 aaPredicted RBP11.16□□□□□ -0.62
TRERF1-205ENST00000541110 SYT1P21579 422 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 DCPSQ96C86 337 aaKnown RBP11.16□□□□□ -0.62
TRERF1-205ENST00000541110 TBC1D7Q9P0N9 293 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 LRFN2Q9ULH4 789 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 HFM1A2PYH4 1435 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 RBBP5Q15291 538 aaKnown RBP11.16□□□□□ -0.62
TRERF1-205ENST00000541110 SCYL1Q96KG9 808 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 CCDC87Q9NVE4 849 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 RTL1A6NKG5 1358 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 WASLO00401 505 aaPredicted RBP11.16□□□□□ -0.62
TRERF1-205ENST00000541110 CD19P15391 556 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 SKIV2LQ15477 1246 aaKnown RBP11.16□□□□□ -0.62
TRERF1-205ENST00000541110 MICALL1Q8N3F8 863 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 RILPQ96NA2 401 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 LZTFL1Q9NQ48 299 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 ST7Q9NRC1 585 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 DNAI1Q9UI46 699 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 GGA1Q9UJY5 639 aa11.16□□□□□ -0.62
TRERF1-205ENST00000541110 APBA3O96018 575 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 PPARDQ03181 441 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 MYCT1Q8N699 235 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 RABGAP1Q9Y3P9 1069 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 CCDC171Q6TFL3 1326 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 TXNDC9O14530 226 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 SAT1P21673 171 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 ZNF365Q70YC5 407 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 DCLK2Q8N568 766 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 HVCN1Q96D96 273 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 MLXIPQ9HAP2 919 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 ABCF3Q9NUQ8 709 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 CCNL1Q9UK58 526 aaPredicted RBP11.15□□□□□ -0.62
TRERF1-205ENST00000541110 TTC21BQ7Z4L5 1316 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 TBC1D8O95759 1140 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 CASP2P42575 452 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 ASIC2Q16515 512 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 ZNF277Q9NRM2 450 aaPredicted RBP11.15□□□□□ -0.62
TRERF1-205ENST00000541110 I3L4J1 428 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 CCDC62Q6P9F0 684 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 PPFIBP2Q8ND30 876 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 ABT1Q9ULW3 272 aaKnown RBP11.15□□□□□ -0.62
TRERF1-205ENST00000541110 KRT3P12035 628 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 IL2RBP14784 551 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 TNNI1P19237 187 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 LACTBP83111 547 aaPredicted RBP11.15□□□□□ -0.62
TRERF1-205ENST00000541110 ZNF174Q15697 407 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 SCYL2Q6P3W7 929 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 TRIM50Q86XT4 487 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 MRPL44Q9H9J2 332 aaKnown RBP11.15□□□□□ -0.62
TRERF1-205ENST00000541110 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.15□□□□□ -0.62
TRERF1-205ENST00000541110 UBN1Q9NPG3 1134 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 PAXBP1Q9Y5B6 917 aa11.15□□□□□ -0.62
TRERF1-205ENST00000541110 RHOXF2BP0C7M4 288 aa11.15□□□□□ -0.63
TRERF1-205ENST00000541110 IL1RL1Q01638 556 aa11.15□□□□□ -0.63
TRERF1-205ENST00000541110 C1orf228Q6PIY5 440 aa11.15□□□□□ -0.63
TRERF1-205ENST00000541110 TAOK1Q7L7X3 1001 aa11.15□□□□□ -0.63
TRERF1-205ENST00000541110 RHOXF2Q9BQY4 288 aa11.15□□□□□ -0.63
TRERF1-205ENST00000541110 ANAPC5Q9UJX4 755 aa11.15□□□□□ -0.63
TRERF1-205ENST00000541110 ZNF449Q6P9G9 518 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms