RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 RBM47A0AV96 593 aaKnown RBP10.52□□□□□ -0.73
YBX3-210ENST00000540975 TTLL4Q14679 1199 aa10.52□□□□□ -0.73
YBX3-210ENST00000540975 ZMYM1Q5SVZ6 1142 aa10.52□□□□□ -0.73
YBX3-210ENST00000540975 MFSD14AQ96MC6 490 aa10.52□□□□□ -0.73
YBX3-210ENST00000540975 PIDD1Q9HB75 910 aa10.52□□□□□ -0.73
YBX3-210ENST00000540975 PCDHB5Q9Y5E4 795 aa10.52□□□□□ -0.73
YBX3-210ENST00000540975 CSADQ9Y600 493 aa10.52□□□□□ -0.73
YBX3-210ENST00000540975 SEZ6L2Q6UXD5 910 aa10.51□□□□□ -0.73
YBX3-210ENST00000540975 C12orf40Q86WS4 652 aa10.51□□□□□ -0.73
YBX3-210ENST00000540975 BCL11AQ9H165 835 aa10.51□□□□□ -0.73
YBX3-210ENST00000540975 LGR6Q9HBX8 967 aa10.51□□□□□ -0.73
YBX3-210ENST00000540975 PRKAG2Q9UGJ0 569 aa10.51□□□□□ -0.73
YBX3-210ENST00000540975 RNF112Q9ULX5 631 aa10.51□□□□□ -0.73
YBX3-210ENST00000540975 DAGLAQ9Y4D2 1042 aa10.51□□□□□ -0.73
YBX3-210ENST00000540975 DCDC2CA8MYV0 355 aa10.5□□□□□ -0.73
YBX3-210ENST00000540975 RNGTTO60942 597 aaKnown RBP10.5□□□□□ -0.73
YBX3-210ENST00000540975 HCLS1P14317 486 aaPredicted RBP10.5□□□□□ -0.73
YBX3-210ENST00000540975 ADMP35318 185 aa10.5□□□□□ -0.73
YBX3-210ENST00000540975 RING1Q06587 406 aa10.5□□□□□ -0.73
YBX3-210ENST00000540975 ZDHHC13Q8IUH4 622 aa10.5□□□□□ -0.73
YBX3-210ENST00000540975 SMYD4Q8IYR2 804 aaPredicted RBP10.5□□□□□ -0.73
YBX3-210ENST00000540975 SHISA5Q8N114 240 aa10.5□□□□□ -0.73
YBX3-210ENST00000540975 RNF214Q8ND24 703 aa10.5□□□□□ -0.73
YBX3-210ENST00000540975 SHKBP1Q8TBC3 707 aa10.5□□□□□ -0.73
YBX3-210ENST00000540975 GAL3ST3Q96A11 431 aa10.5□□□□□ -0.73
YBX3-210ENST00000540975 TLR6Q9Y2C9 796 aa10.5□□□□□ -0.73
YBX3-210ENST00000540975 DYNC1LI2O43237 492 aaPredicted RBP10.49□□□□□ -0.73
YBX3-210ENST00000540975 TFE3P19532 575 aaPredicted RBP10.49□□□□□ -0.73
YBX3-210ENST00000540975 LMNB1P20700 586 aa10.49□□□□□ -0.73
YBX3-210ENST00000540975 INPP5AQ14642 412 aa10.49□□□□□ -0.73
YBX3-210ENST00000540975 PPM1JQ5JR12 505 aa10.49□□□□□ -0.73
YBX3-210ENST00000540975 FBXL6Q8N531 539 aa10.49□□□□□ -0.73
YBX3-210ENST00000540975 GATA6Q92908 595 aa10.49□□□□□ -0.73
YBX3-210ENST00000540975 C1GALT1Q9NS00 363 aa10.49□□□□□ -0.73
YBX3-210ENST00000540975 WDR64B1ANS9 1081 aa10.48□□□□□ -0.73
YBX3-210ENST00000540975 F13BP05160 661 aa10.48□□□□□ -0.73
YBX3-210ENST00000540975 NEFMP07197 916 aa10.48□□□□□ -0.73
YBX3-210ENST00000540975 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.48□□□□□ -0.73
YBX3-210ENST00000540975 PHC3Q8NDX5 983 aa10.48□□□□□ -0.73
YBX3-210ENST00000540975 TBC1D32Q96NH3 1257 aa10.48□□□□□ -0.73
YBX3-210ENST00000540975 RSRP1Q9BUV0 290 aa10.48□□□□□ -0.73
YBX3-210ENST00000540975 PCOLCE2Q9UKZ9 415 aa10.48□□□□□ -0.73
YBX3-210ENST00000540975 PRR19A6NJB7 356 aa10.47□□□□□ -0.73
YBX3-210ENST00000540975 LDLRAD1Q5T700 205 aa10.47□□□□□ -0.73
YBX3-210ENST00000540975 ZAR1Q86SH2 424 aa10.47□□□□□ -0.73
YBX3-210ENST00000540975 RGS22Q8NE09 1264 aa10.47□□□□□ -0.73
YBX3-210ENST00000540975 SEPT6Q14141 434 aa10.46□□□□□ -0.73
YBX3-210ENST00000540975 LRFN4Q6PJG9 635 aa10.46□□□□□ -0.73
YBX3-210ENST00000540975 RELL1Q8IUW5 271 aa10.46□□□□□ -0.73
YBX3-210ENST00000540975 GIMAP7Q8NHV1 300 aa10.46□□□□□ -0.73
YBX3-210ENST00000540975 ISL2Q96A47 359 aa10.46□□□□□ -0.73
YBX3-210ENST00000540975 ELMO3Q96BJ8 720 aa10.46□□□□□ -0.73
YBX3-210ENST00000540975 MIR1-1HGQ9H1L0 117 aa10.46□□□□□ -0.73
YBX3-210ENST00000540975 ATG3Q9NT62 314 aa10.46□□□□□ -0.73
YBX3-210ENST00000540975 SNCAIPQ9Y6H5 919 aa10.46□□□□□ -0.73
YBX3-210ENST00000540975 F6X3S4 739 aa10.45□□□□□ -0.74
YBX3-210ENST00000540975 FANCGO15287 622 aa10.45□□□□□ -0.74
YBX3-210ENST00000540975 TGFB1P01137 390 aa10.45□□□□□ -0.74
YBX3-210ENST00000540975 CDK8P49336 464 aa10.45□□□□□ -0.74
YBX3-210ENST00000540975 CYFIP1Q7L576 1253 aa10.45□□□□□ -0.74
YBX3-210ENST00000540975 HDXQ7Z353 690 aa10.45□□□□□ -0.74
YBX3-210ENST00000540975 PLPPR2Q96GM1 343 aa10.45□□□□□ -0.74
YBX3-210ENST00000540975 SSU72Q9NP77 194 aaKnown RBP10.45□□□□□ -0.74
YBX3-210ENST00000540975 NTF4P34130 210 aa10.44□□□□□ -0.74
YBX3-210ENST00000540975 ZBTB37Q5TC79 503 aa10.44□□□□□ -0.74
YBX3-210ENST00000540975 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.44□□□□□ -0.74
YBX3-210ENST00000540975 JARID2Q92833 1246 aaPredicted RBP10.44□□□□□ -0.74
YBX3-210ENST00000540975 TMEM74Q96NL1 305 aa10.44□□□□□ -0.74
YBX3-210ENST00000540975 BACH2Q9BYV9 841 aa10.44□□□□□ -0.74
YBX3-210ENST00000540975 PICK1Q9NRD5 415 aa10.44□□□□□ -0.74
YBX3-210ENST00000540975 FAM170BA6NMN3 283 aa10.43□□□□□ -0.74
YBX3-210ENST00000540975 GBP2P32456 591 aaPredicted RBP10.43□□□□□ -0.74
YBX3-210ENST00000540975 CAMK2GQ13555 558 aaPredicted RBP10.43□□□□□ -0.74
YBX3-210ENST00000540975 PWP1Q13610 501 aa10.43□□□□□ -0.74
YBX3-210ENST00000540975 OGFOD3Q6PK18 319 aa10.43□□□□□ -0.74
YBX3-210ENST00000540975 CCDC84Q86UT8 332 aaPredicted RBP10.43□□□□□ -0.74
YBX3-210ENST00000540975 TMEM87AQ8NBN3 555 aa10.43□□□□□ -0.74
YBX3-210ENST00000540975 OSBPL1AQ9BXW6 950 aa10.43□□□□□ -0.74
YBX3-210ENST00000540975 GFRA2O00451 464 aa10.42□□□□□ -0.74
YBX3-210ENST00000540975 PF4P02776 101 aa10.42□□□□□ -0.74
YBX3-210ENST00000540975 LMNB2Q03252 620 aa10.42□□□□□ -0.74
YBX3-210ENST00000540975 TSNAXIP1Q2TAA8 658 aa10.42□□□□□ -0.74
YBX3-210ENST00000540975 MINDY4BA8MYZ0 360 aa10.41□□□□□ -0.74
YBX3-210ENST00000540975 MED26O95402 600 aa10.41□□□□□ -0.74
YBX3-210ENST00000540975 CDK5R2Q13319 367 aa10.41□□□□□ -0.74
YBX3-210ENST00000540975 WIPI1Q5MNZ9 446 aaPredicted RBP10.41□□□□□ -0.74
YBX3-210ENST00000540975 DUSP27Q5VZP5 1158 aa10.41□□□□□ -0.74
YBX3-210ENST00000540975 ERMP1Q7Z2K6 904 aa10.41□□□□□ -0.74
YBX3-210ENST00000540975 PSMG3-AS1Q96PY0 264 aa10.41□□□□□ -0.74
YBX3-210ENST00000540975 COPRSQ9NQ92 184 aa10.41□□□□□ -0.74
YBX3-210ENST00000540975 LEMD3Q9Y2U8 911 aa10.41□□□□□ -0.74
YBX3-210ENST00000540975 CCDC9Q9Y3X0 531 aaKnown RBP10.41□□□□□ -0.74
YBX3-210ENST00000540975 HYAL3O43820 417 aaPredicted RBP10.4□□□□□ -0.74
YBX3-210ENST00000540975 COBLO75128 1261 aa10.4□□□□□ -0.74
YBX3-210ENST00000540975 CDC37L1Q7L3B6 337 aa10.4□□□□□ -0.74
YBX3-210ENST00000540975 UBE3DQ7Z6J8 389 aa10.4□□□□□ -0.74
YBX3-210ENST00000540975 ZNF507Q8TCN5 953 aa10.4□□□□□ -0.74
YBX3-210ENST00000540975 RHOVQ96L33 236 aa10.4□□□□□ -0.74
YBX3-210ENST00000540975 METTL22Q9BUU2 404 aaPredicted RBP10.4□□□□□ -0.74
YBX3-210ENST00000540975 WNT10AQ9GZT5 417 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 1104.9 ms