RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 EVI5LQ96CN4 794 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 SNRKQ9NRH2 765 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 GGA1Q9UJY5 639 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 SLX4Q8IY92 1834 aa8.05□□□□□ -1.12
CLTCL1-206ENST00000540896 CACNA1SQ13698 1873 aa8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 WTIPA6NIX2 430 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 GOLIM4O00461 696 aa8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 GRIN3BO60391 1043 aa8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 EIF5BO60841 1220 aaKnown RBP8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 UFL1O94874 794 aa8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 PHKA1P46020 1223 aa8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 GYG1P46976 350 aa8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 FOXC1Q12948 553 aa8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 SOGA3Q5TF21 947 aa8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 DPP8Q6V1X1 898 aaPredicted RBP8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 ARHGAP27Q6ZUM4 889 aa8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 MPNDQ8N594 471 aa8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 HAUS7Q99871 368 aa8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 FSD1Q9BTV5 496 aa8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 BACH2Q9BYV9 841 aa8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 UPF2Q9HAU5 1272 aaKnown RBP8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 UTRNP46939 3433 aa8.04□□□□□ -1.12
CLTCL1-206ENST00000540896 COL4A1P02462 1669 aa8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 KDM4AO75164 1064 aa8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 CD46P15529 392 aa8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 HIBADHP31937 336 aaKnown RBP8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 LRRFIP1Q32MZ4 808 aaKnown RBP8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 C8orf34Q49A92 452 aa8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 CC2D2BQ6DHV5 1058 aa8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 TBC1D9Q6ZT07 1266 aa8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 SLC51AQ86UW1 340 aa8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 RTKN2Q8IZC4 609 aa8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 ZNF512BQ96KM6 892 aaPredicted RBP8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 DIAPH3Q9NSV4 1193 aa8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 PAG1Q9NWQ8 432 aa8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 PKD2L1Q9P0L9 805 aa8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 IQSEC3Q9UPP2 1182 aaPredicted RBP8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 NDUFB9Q9Y6M9 179 aa8.03□□□□□ -1.12
CLTCL1-206ENST00000540896 ARFGEF1Q9Y6D6 1849 aa8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 HIP1O00291 1037 aa8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 ARID4AP29374 1257 aaPredicted RBP8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 ZAP70P43403 619 aa8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 MFAP1P55081 439 aaKnown RBP8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 SCARF1Q14162 830 aa8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 WASHC4Q2M389 1173 aa8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 CCDC93Q567U6 631 aa8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 ZNF804AQ7Z570 1209 aa8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 FBXO33Q7Z6M2 555 aa8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 CYP4X1Q8N118 509 aa8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 SPATA5Q8NB90 893 aa8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 TBC1D16Q8TBP0 767 aa8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 RUFY2Q8WXA3 655 aa8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 EDC3Q96F86 508 aaKnown RBP8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 FAM84BQ96KN1 310 aaPredicted RBP8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 GPR101Q96P66 508 aaPredicted RBP8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 EYA3Q99504 573 aa8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 ZC3H12CQ9C0D7 883 aaKnown RBP8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 PODXL2Q9NZ53 605 aa8.02□□□□□ -1.13
CLTCL1-206ENST00000540896 CHMLP26374 656 aa8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 KLRK1P26718 216 aa8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 MCAMP43121 646 aa8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 TTF1Q15361 905 aaPredicted RBP8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 ZSCAN25Q6NSZ9 544 aa8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 CWC27Q6UX04 472 aaKnown RBP8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 PI16Q6UXB8 463 aa8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 KIAA1211Q6ZU35 1233 aa8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 KBTBD3Q8NAB2 608 aa8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 SUPT20HQ8NEM7 779 aa8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 HMG20BQ9P0W2 317 aa8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 POLLQ9UGP5 575 aa8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 DENND2AQ9ULE3 1009 aa8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 CHD4Q14839 1912 aa8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 SPEF2Q9C093 1822 aa8.01□□□□□ -1.13
CLTCL1-206ENST00000540896 NFKBIEO00221 500 aa8□□□□□ -1.13
CLTCL1-206ENST00000540896 IDH1O75874 414 aaKnown RBP8□□□□□ -1.13
CLTCL1-206ENST00000540896 REC8O95072 547 aa8□□□□□ -1.13
CLTCL1-206ENST00000540896 CHAF1AQ13111 956 aaPredicted RBP8□□□□□ -1.13
CLTCL1-206ENST00000540896 RASGRF1Q13972 1273 aa8□□□□□ -1.13
CLTCL1-206ENST00000540896 TXNRD3Q86VQ6 643 aa8□□□□□ -1.13
CLTCL1-206ENST00000540896 KRI1Q8N9T8 703 aaKnown RBP8□□□□□ -1.13
CLTCL1-206ENST00000540896 PSMD1Q99460 953 aa8□□□□□ -1.13
CLTCL1-206ENST00000540896 USB1Q9BQ65 265 aaKnown RBP8□□□□□ -1.13
CLTCL1-206ENST00000540896 TAOK3Q9H2K8 898 aa8□□□□□ -1.13
CLTCL1-206ENST00000540896 ANTXR1Q9H6X2 564 aa8□□□□□ -1.13
CLTCL1-206ENST00000540896 RAI14Q9P0K7 980 aa8□□□□□ -1.13
CLTCL1-206ENST00000540896 LRP2BPQ9P2M1 347 aa8□□□□□ -1.13
CLTCL1-206ENST00000540896 ABCF2Q9UG63 623 aa8□□□□□ -1.13
CLTCL1-206ENST00000540896 LRRC37AA6NMS7 1700 aa7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 RNF113AO15541 343 aaKnown RBP7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 CYP2E1P05181 493 aaPredicted RBP7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 ZFYP08048 801 aaPredicted RBP7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 CLCN1P35523 988 aa7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 MMP16P51512 607 aa7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 RASSF7Q02833 373 aa7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 MAP3K12Q12852 859 aa7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 NMIQ13287 307 aaPredicted RBP7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 CTC1Q2NKJ3 1217 aa7.99□□□□□ -1.13
CLTCL1-206ENST00000540896 C15orf52Q6ZUT6 534 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms