RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 DSCC1Q9BVC3 393 aa15.96■□□□□ 0.14
USP3-204ENST00000540797 SPATA31A3Q5VYP0 1347 aa15.96■□□□□ 0.14
USP3-204ENST00000540797 EZRP15311 586 aaKnown RBP15.95■□□□□ 0.14
USP3-204ENST00000540797 ADCY7P51828 1080 aa15.95■□□□□ 0.14
USP3-204ENST00000540797 PPP2R5BQ15173 497 aa15.95■□□□□ 0.14
USP3-204ENST00000540797 FAM200AQ8TCP9 573 aa15.95■□□□□ 0.14
USP3-204ENST00000540797 USP17L12C9JPN9 530 aa15.95■□□□□ 0.14
USP3-204ENST00000540797 USP17L21D6R901 530 aa15.95■□□□□ 0.14
USP3-204ENST00000540797 PPEF1O14829 653 aaPredicted RBP15.95■□□□□ 0.14
USP3-204ENST00000540797 CCNT1O60563 726 aaKnown RBP15.95■□□□□ 0.14
USP3-204ENST00000540797 SEC24BO95487 1268 aa15.95■□□□□ 0.14
USP3-204ENST00000540797 PLCD1P51178 756 aa15.95■□□□□ 0.14
USP3-204ENST00000540797 GPHNQ9NQX3 736 aaPredicted RBP15.95■□□□□ 0.14
USP3-204ENST00000540797 NOD1Q9Y239 953 aa15.95■□□□□ 0.14
USP3-204ENST00000540797 ZNF804BA4D1E1 1349 aa15.95■□□□□ 0.14
USP3-204ENST00000540797 USH1GQ495M9 461 aa15.95■□□□□ 0.14
USP3-204ENST00000540797 AKNAD1Q5T1N1 836 aa15.95■□□□□ 0.14
USP3-204ENST00000540797 CCDC65Q8IXS2 484 aa15.95■□□□□ 0.14
USP3-204ENST00000540797 EAF2Q96CJ1 260 aaPredicted RBP15.95■□□□□ 0.14
USP3-204ENST00000540797 FERMT1Q9BQL6 677 aa15.95■□□□□ 0.14
USP3-204ENST00000540797 HOMER2Q9NSB8 354 aa15.95■□□□□ 0.14
USP3-204ENST00000540797 CYLC1P35663 651 aaPredicted RBP15.94■□□□□ 0.14
USP3-204ENST00000540797 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.94■□□□□ 0.14
USP3-204ENST00000540797 NOP56O00567 594 aaKnown RBP15.94■□□□□ 0.14
USP3-204ENST00000540797 STX17P56962 302 aa15.94■□□□□ 0.14
USP3-204ENST00000540797 MAP9Q49MG5 647 aa15.94■□□□□ 0.14
USP3-204ENST00000540797 NAA15Q9BXJ9 866 aaKnown RBP15.94■□□□□ 0.14
USP3-204ENST00000540797 TCP10L2B9ZVM9 353 aa15.94■□□□□ 0.14
USP3-204ENST00000540797 DIS3L2Q8IYB7 885 aaKnown RBP15.94■□□□□ 0.14
USP3-204ENST00000540797 TAOK3Q9H2K8 898 aa15.94■□□□□ 0.14
USP3-204ENST00000540797 XDHP47989 1333 aa15.94■□□□□ 0.14
USP3-204ENST00000540797 SMCR8Q8TEV9 937 aaPredicted RBP15.94■□□□□ 0.14
USP3-204ENST00000540797 C16orf45Q96MC5 204 aaPredicted RBP15.94■□□□□ 0.14
USP3-204ENST00000540797 AS3MTQ9HBK9 375 aa15.94■□□□□ 0.14
USP3-204ENST00000540797 MCM3P25205 808 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 UBE4AQ14139 1066 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 HAUS3Q68CZ6 603 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 PDE6AP16499 860 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 APBB1IPQ7Z5R6 666 aaPredicted RBP15.93■□□□□ 0.14
USP3-204ENST00000540797 CCDC113Q9H0I3 377 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 CLASP1Q7Z460 1538 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 TXKP42681 527 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 NONOQ15233 471 aaKnown RBP eCLIP15.93■□□□□ 0.14
USP3-204ENST00000540797 TMCO3Q6UWJ1 677 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 EHBP1Q8NDI1 1231 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 PIGBQ92521 554 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 JADE2Q9NQC1 790 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 E7EWF7 191 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 CFBP00751 764 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 PPM1FP49593 454 aaPredicted RBP15.93■□□□□ 0.14
USP3-204ENST00000540797 DCAF15Q66K64 600 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 DPH6Q7L8W6 267 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 CCDC97Q96F63 343 aaPredicted RBP15.93■□□□□ 0.14
USP3-204ENST00000540797 DNAJC5Q9H3Z4 198 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 ARHGAP31Q2M1Z3 1444 aa15.93■□□□□ 0.14
USP3-204ENST00000540797 PDE8BO95263 885 aa15.92■□□□□ 0.14
USP3-204ENST00000540797 KRT25Q7Z3Z0 450 aa15.92■□□□□ 0.14
USP3-204ENST00000540797 RPL13P26373 211 aaKnown RBP15.92■□□□□ 0.14
USP3-204ENST00000540797 ACTN2P35609 894 aa15.92■□□□□ 0.14
USP3-204ENST00000540797 BTDP43251 543 aa15.92■□□□□ 0.14
USP3-204ENST00000540797 IFFO1Q0D2I5 559 aa15.92■□□□□ 0.14
USP3-204ENST00000540797 KIFC2Q96AC6 838 aa15.92■□□□□ 0.14
USP3-204ENST00000540797 PRAMEF22A3QJZ6 481 aa15.92■□□□□ 0.14
USP3-204ENST00000540797 DKC1O60832 514 aaKnown RBP eCLIP15.92■□□□□ 0.14
USP3-204ENST00000540797 SNW1Q13573 536 aaKnown RBP15.92■□□□□ 0.14
USP3-204ENST00000540797 ERFEQ4G0M1 354 aa15.92■□□□□ 0.14
USP3-204ENST00000540797 DCPSQ96C86 337 aaKnown RBP15.92■□□□□ 0.14
USP3-204ENST00000540797 LEMD3Q9Y2U8 911 aa15.92■□□□□ 0.14
USP3-204ENST00000540797 ELP1O95163 1332 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 CHURC1Q8WUH1 139 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 PHKBQ93100 1093 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 ADGRL3Q9HAR2 1447 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 SYNMO15061 1565 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 ARID5AQ03989 594 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 TTC38Q5R3I4 469 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 ANO1Q5XXA6 986 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 PLVAPQ9BX97 442 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 ARAP3Q8WWN8 1544 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 A0A1B0GVL5 298 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 SMTNP53814 917 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 TYRO3Q06418 890 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 TMC4Q7Z404 712 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 SULF1Q8IWU6 871 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 IFNL3Q8IZI9 196 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 ARID4AP29374 1257 aaPredicted RBP15.91■□□□□ 0.14
USP3-204ENST00000540797 HLTFQ14527 1009 aaKnown RBP eCLIP15.91■□□□□ 0.14
USP3-204ENST00000540797 HAUS7Q99871 368 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 PUS3Q9BZE2 481 aaKnown RBP15.91■□□□□ 0.14
USP3-204ENST00000540797 CCDC169A6NNP5 214 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 NCAPH2Q6IBW4 605 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 SDR42E1Q8WUS8 393 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 COPRSQ9NQ92 184 aa15.91■□□□□ 0.14
USP3-204ENST00000540797 HARSP12081 509 aaKnown RBP15.9■□□□□ 0.14
USP3-204ENST00000540797 GNG11P61952 73 aa15.9■□□□□ 0.14
USP3-204ENST00000540797 OTUD7BQ6GQQ9 843 aa15.9■□□□□ 0.14
USP3-204ENST00000540797 RGS22Q8NE09 1264 aa15.9■□□□□ 0.14
USP3-204ENST00000540797 TTC16Q8NEE8 873 aa15.9■□□□□ 0.14
USP3-204ENST00000540797 A2ML1A8K2U0 1454 aa15.9■□□□□ 0.14
USP3-204ENST00000540797 DDX39AO00148 427 aaKnown RBP15.9■□□□□ 0.14
USP3-204ENST00000540797 TET3O43151 1660 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms