RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 NBPF3Q9H094 633 aa16.87■□□□□ 0.29
CYB561A3-216ENST00000540755 SLKQ9H2G2 1235 aaPredicted RBP16.87■□□□□ 0.29
CYB561A3-216ENST00000540755 GPR75-ASB3A0A0A6YYF3 556 aa16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 PPIP5K2O43314 1243 aa16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 HSPA1AP0DMV8 641 aaKnown RBP16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 HSPA1BP0DMV9 641 aaKnown RBP16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 DDIT3P35638 169 aa16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 SCNN1DP51172 638 aa16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 EXOSC10Q01780 885 aaKnown RBP16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 COL9A3Q14050 684 aaPredicted RBP16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 DIXDC1Q155Q3 683 aa16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 CERS5Q8N5B7 392 aa16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 NCOA7Q8NI08 942 aa16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 FBXW7Q969H0 707 aa16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 ZSCAN31Q96LW9 406 aaPredicted RBP16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 NOL10Q9BSC4 688 aaKnown RBP16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 ATP8A2Q9NTI2 1148 aa16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 MKRN1Q9UHC7 482 aaKnown RBP16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 CNTNAP1P78357 1384 aa16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 WDR19Q8NEZ3 1342 aa16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 NOL8Q76FK4 1167 aaKnown RBP16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 TBC1D10CQ8IV04 446 aa16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 INTS4Q96HW7 963 aaKnown RBP16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 SH2B1Q9NRF2 756 aaPredicted RBP16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 ANAPC4Q9UJX5 808 aa16.86■□□□□ 0.29
CYB561A3-216ENST00000540755 PLCG2P16885 1265 aa16.85■□□□□ 0.29
CYB561A3-216ENST00000540755 EIF6P56537 245 aaKnown RBP16.85■□□□□ 0.29
CYB561A3-216ENST00000540755 TRDNQ13061 729 aa16.85■□□□□ 0.29
CYB561A3-216ENST00000540755 TOB2Q14106 344 aaPredicted RBP16.85■□□□□ 0.29
CYB561A3-216ENST00000540755 MB21D2Q8IYB1 491 aaPredicted RBP16.85■□□□□ 0.29
CYB561A3-216ENST00000540755 FBXL16Q8N461 479 aa16.85■□□□□ 0.29
CYB561A3-216ENST00000540755 AGXT2Q9BYV1 514 aa16.85■□□□□ 0.29
CYB561A3-216ENST00000540755 GJA3Q9Y6H8 435 aa16.85■□□□□ 0.29
CYB561A3-216ENST00000540755 DDX60LQ5H9U9 1706 aaKnown RBP16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 USP17L3A6NCW0 530 aa16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 USP17L4A6NCW7 530 aa16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 BTDP43251 543 aa16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 PPARAQ07869 468 aa16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 DACT2Q5SW24 774 aa16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 MAP1SQ66K74 1059 aaPredicted RBP16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 Q6ZUG5 572 aa16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 USP17L1Q7RTZ2 530 aa16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 RALYLQ86SE5 291 aaKnown RBP16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 PNMA8AQ86V59 439 aaPredicted RBP16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 NIM1KQ8IY84 436 aa16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 STAG1Q8WVM7 1258 aa16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 TCEANC2Q96MN5 208 aa16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 CWC22Q9HCG8 908 aaKnown RBP16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 DCP1AQ9NPI6 582 aaPredicted RBP16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 CIZ1Q9ULV3 898 aaPredicted RBP16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 ECM29Q5VYK3 1845 aa16.84■□□□□ 0.29
CYB561A3-216ENST00000540755 MCM5P33992 734 aa16.83■□□□□ 0.28
CYB561A3-216ENST00000540755 EPS15P42566 896 aa16.83■□□□□ 0.28
CYB561A3-216ENST00000540755 AKNAD1Q5T1N1 836 aa16.83■□□□□ 0.28
CYB561A3-216ENST00000540755 MRIQ9BWK5 157 aa16.83■□□□□ 0.28
CYB561A3-216ENST00000540755 RNF41Q9H4P4 317 aaPredicted RBP16.83■□□□□ 0.28
CYB561A3-216ENST00000540755 CNNM2Q9H8M5 875 aa16.83■□□□□ 0.28
CYB561A3-216ENST00000540755 CHMP5Q9NZZ3 219 aa16.83■□□□□ 0.28
CYB561A3-216ENST00000540755 ARPP21Q9UBL0 812 aaPredicted RBP16.83■□□□□ 0.28
CYB561A3-216ENST00000540755 TTF2Q9UNY4 1162 aaKnown RBP16.83■□□□□ 0.28
CYB561A3-216ENST00000540755 DAGLAQ9Y4D2 1042 aa16.83■□□□□ 0.28
CYB561A3-216ENST00000540755 SBK1Q52WX2 424 aa16.82■□□□□ 0.28
CYB561A3-216ENST00000540755 HHIPL2Q6UWX4 724 aa16.82■□□□□ 0.28
CYB561A3-216ENST00000540755 SH3RF3Q8TEJ3 882 aaPredicted RBP16.82■□□□□ 0.28
CYB561A3-216ENST00000540755 KCNQ5Q9NR82 932 aa16.82■□□□□ 0.28
CYB561A3-216ENST00000540755 FOXD4L1Q9NU39 408 aa16.82■□□□□ 0.28
CYB561A3-216ENST00000540755 TPCN1Q9ULQ1 816 aa16.82■□□□□ 0.28
CYB561A3-216ENST00000540755 MYH1P12882 1939 aa16.82■□□□□ 0.28
CYB561A3-216ENST00000540755 TMEM88BA6NKF7 163 aa16.81■□□□□ 0.28
CYB561A3-216ENST00000540755 YDJCA8MPS7 323 aa16.81■□□□□ 0.28
CYB561A3-216ENST00000540755 PCP11498 1178 aaKnown RBP16.81■□□□□ 0.28
CYB561A3-216ENST00000540755 USP5P45974 858 aa16.81■□□□□ 0.28
CYB561A3-216ENST00000540755 HDLBPQ00341 1268 aaKnown RBP16.81■□□□□ 0.28
CYB561A3-216ENST00000540755 CTDSPL2Q05D32 466 aa16.81■□□□□ 0.28
CYB561A3-216ENST00000540755 CTR9Q6PD62 1173 aa16.81■□□□□ 0.28
CYB561A3-216ENST00000540755 MFSD6Q6ZSS7 791 aa16.81■□□□□ 0.28
CYB561A3-216ENST00000540755 MXD3Q9BW11 206 aa16.81■□□□□ 0.28
CYB561A3-216ENST00000540755 KRT23Q9C075 422 aa16.81■□□□□ 0.28
CYB561A3-216ENST00000540755 CLEC11AQ9Y240 323 aa16.81■□□□□ 0.28
CYB561A3-216ENST00000540755 NEDD4P46934 1319 aa16.81■□□□□ 0.28
CYB561A3-216ENST00000540755 MINDY4BA8MYZ0 360 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 F8W031 263 aaPredicted RBP16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 LARGE1O95461 756 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 ANTXR2P58335 489 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 RHBDL3P58872 404 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 FGD1P98174 961 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 ME3Q16798 604 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 LARP6Q9BRS8 491 aaKnown RBP16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 MYO3BQ8WXR4 1341 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 USP17L12C9JPN9 530 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 USP17L21D6R901 530 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 PRC1O43663 620 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 FGRP09769 529 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 LMOD1P29536 600 aaPredicted RBP16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 CXCL9Q07325 125 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 TEX11Q8IYF3 940 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 BRF1Q92994 677 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 TEKT1Q969V4 418 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 MTA3Q9BTC8 594 aa16.8■□□□□ 0.28
CYB561A3-216ENST00000540755 LRRC2Q9BYS8 371 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms