RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 CEMIPQ8WUJ3 1361 aa14.63□□□□□ -0.07
SFSWAP-209ENST00000540469 CDC27P30260 824 aa14.63□□□□□ -0.07
SFSWAP-209ENST00000540469 SLC39A6Q13433 755 aa14.63□□□□□ -0.07
SFSWAP-209ENST00000540469 FILIP1LQ4L180 1135 aa14.63□□□□□ -0.07
SFSWAP-209ENST00000540469 DNAJC21Q5F1R6 531 aaKnown RBP14.63□□□□□ -0.07
SFSWAP-209ENST00000540469 MICU3Q86XE3 530 aa14.63□□□□□ -0.07
SFSWAP-209ENST00000540469 THEMISQ8N1K5 641 aaPredicted RBP14.63□□□□□ -0.07
SFSWAP-209ENST00000540469 CDC5LQ99459 802 aaKnown RBP14.63□□□□□ -0.07
SFSWAP-209ENST00000540469 L1RE1Q9UN81 338 aa14.63□□□□□ -0.07
SFSWAP-209ENST00000540469 MAST3O60307 1309 aa14.63□□□□□ -0.07
SFSWAP-209ENST00000540469 KRT40Q6A162 431 aa14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 CCDC148Q8NFR7 591 aa14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 HNRNPLLQ8WVV9 542 aaKnown RBP14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 RNF113AO15541 343 aaKnown RBP14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 RNF40O75150 1001 aa14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 PIP4K2BP78356 416 aa14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 NCOA7Q8NI08 942 aa14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 PHKBQ93100 1093 aa14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 MYCBPQ99417 103 aaPredicted RBP14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 NAPGQ99747 312 aaPredicted RBP14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 AGXT2Q9BYV1 514 aa14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 RABEP2Q9H5N1 569 aa14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 BRMS1Q9HCU9 246 aa14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 METAP2P50579 478 aaKnown RBP eCLIP14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 POSTNQ15063 836 aa14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 LMBR1LQ6UX01 489 aa14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 CRACR2AQ9BSW2 395 aa14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 ADGRG1Q9Y653 693 aa14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 NCAPD2Q15021 1401 aa14.62□□□□□ -0.07
SFSWAP-209ENST00000540469 A0A0U1RQJ8 604 aa14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 POLR2DO15514 142 aaKnown RBP14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 ZMYM1Q5SVZ6 1142 aa14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 LRRC31Q6UY01 552 aa14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 ATRIPQ8WXE1 791 aa14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 FMR1Q06787 632 aaKnown RBP eCLIP14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 GRAMD1CQ8IYS0 662 aa14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 MAN1B1Q9UKM7 699 aa14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 ZNF213O14771 459 aa14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 CDKL5O76039 1030 aa14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 GUCY2CP25092 1073 aa14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 MNAT1P51948 309 aa14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 RBL2Q08999 1139 aa14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 RAD9BQ6WBX8 426 aa14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 YY1AP1Q9H869 796 aa14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 MED4Q9NPJ6 270 aa14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 FMN2Q9NZ56 1722 aa14.61□□□□□ -0.07
SFSWAP-209ENST00000540469 TECPR2O15040 1411 aa14.6□□□□□ -0.07
SFSWAP-209ENST00000540469 TBX2Q13207 712 aaPredicted RBP14.6□□□□□ -0.07
SFSWAP-209ENST00000540469 ANKRD13DQ6ZTN6 518 aa14.6□□□□□ -0.07
SFSWAP-209ENST00000540469 FOXP4Q8IVH2 680 aaPredicted RBP14.6□□□□□ -0.07
SFSWAP-209ENST00000540469 KRI1Q8N9T8 703 aaKnown RBP14.6□□□□□ -0.07
SFSWAP-209ENST00000540469 MLKLQ8NB16 471 aa14.6□□□□□ -0.07
SFSWAP-209ENST00000540469 ACRBPQ8NEB7 543 aa14.6□□□□□ -0.07
SFSWAP-209ENST00000540469 PES1O00541 588 aaKnown RBP14.6□□□□□ -0.07
SFSWAP-209ENST00000540469 PPP6R2O75170 966 aa14.6□□□□□ -0.07
SFSWAP-209ENST00000540469 CORO7P57737 925 aa14.6□□□□□ -0.07
SFSWAP-209ENST00000540469 TUBB4BP68371 445 aa14.6□□□□□ -0.07
SFSWAP-209ENST00000540469 SAFBQ15424 915 aaKnown RBP eCLIP14.6□□□□□ -0.07
SFSWAP-209ENST00000540469 M0R2C6 588 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 TEX33O43247 280 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 PPFIA4O75335 1185 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 LIG3P49916 1009 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 MAP9Q49MG5 647 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 EFCAB13Q8IY85 973 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 CAGE1Q8TC20 777 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 SERTAD1Q9UHV2 236 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 RFX7Q2KHR2 1363 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 AGLP35573 1532 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 RESP18Q5W5W9 173 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 NCAPH2Q6IBW4 605 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 METTL22Q9BUU2 404 aaPredicted RBP14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 GEMIN8Q9NWZ8 242 aaKnown RBP14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 N4BP2Q86UW6 1770 aaPredicted RBP14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 IARSP41252 1262 aaKnown RBP14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 MSANTD4Q8NCY6 345 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 NUP88Q99567 741 aaPredicted RBP14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 RAB21Q9UL25 225 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 LRRC37A3O60309 1634 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 UTYO14607 1347 aa14.59□□□□□ -0.07
SFSWAP-209ENST00000540469 LRRIQ3A6PVS8 624 aaPredicted RBP14.58□□□□□ -0.07
SFSWAP-209ENST00000540469 TUBB2AQ13885 445 aa14.58□□□□□ -0.07
SFSWAP-209ENST00000540469 AMOTQ4VCS5 1084 aa14.58□□□□□ -0.07
SFSWAP-209ENST00000540469 TADA2BQ86TJ2 420 aa14.58□□□□□ -0.07
SFSWAP-209ENST00000540469 TUBB2BQ9BVA1 445 aa14.58□□□□□ -0.07
SFSWAP-209ENST00000540469 GUCA1BQ9UMX6 200 aa14.58□□□□□ -0.07
SFSWAP-209ENST00000540469 HPSEQ9Y251 543 aa14.58□□□□□ -0.07
SFSWAP-209ENST00000540469 BMP6P22004 513 aa14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 CASP14P31944 242 aa14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 AFMP43652 599 aa14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 USP5P45974 858 aa14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 WHAMMP3Q1A5X7 153 aa14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 NOA1Q8NC60 698 aaKnown RBP14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 ENOX1Q8TC92 643 aaKnown RBP14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 PANX2Q96RD6 677 aa14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 NCAPGQ9BPX3 1015 aa14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 FAM107BQ9H098 131 aa14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 ERLIN2O94905 339 aa14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 TUBBP07437 444 aa14.58□□□□□ -0.08
SFSWAP-209ENST00000540469 CCT6AP40227 531 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms