RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 NPM3O75607 178 aaKnown RBP14.87□□□□□ -0.03
CBX3P4-202ENST00000540428 FMNL1O95466 1100 aaPredicted RBP14.87□□□□□ -0.03
CBX3P4-202ENST00000540428 BCRP11274 1271 aa14.87□□□□□ -0.03
CBX3P4-202ENST00000540428 PTPRAP18433 802 aa14.87□□□□□ -0.03
CBX3P4-202ENST00000540428 OSBPP22059 807 aa14.87□□□□□ -0.03
CBX3P4-202ENST00000540428 TIMM10P62072 90 aa14.87□□□□□ -0.03
CBX3P4-202ENST00000540428 PRRT2Q7Z6L0 340 aaPredicted RBP14.87□□□□□ -0.03
CBX3P4-202ENST00000540428 NKX2-3Q8TAU0 364 aa14.87□□□□□ -0.03
CBX3P4-202ENST00000540428 ABCF2Q9UG63 623 aa14.87□□□□□ -0.03
CBX3P4-202ENST00000540428 SLC45A1Q9Y2W3 748 aa14.87□□□□□ -0.03
CBX3P4-202ENST00000540428 BRCA2P51587 3418 aa14.86□□□□□ -0.03
CBX3P4-202ENST00000540428 SRGAP3O43295 1099 aa14.86□□□□□ -0.03
CBX3P4-202ENST00000540428 CTNND1O60716 968 aaKnown RBP14.86□□□□□ -0.03
CBX3P4-202ENST00000540428 MAP4K4O95819 1239 aaPredicted RBP14.86□□□□□ -0.03
CBX3P4-202ENST00000540428 GRK4P32298 578 aa14.86□□□□□ -0.03
CBX3P4-202ENST00000540428 BTDP43251 543 aa14.86□□□□□ -0.03
CBX3P4-202ENST00000540428 ERICH6Q7L0X2 663 aa14.86□□□□□ -0.03
CBX3P4-202ENST00000540428 SH3BP5LQ7L8J4 393 aa14.86□□□□□ -0.03
CBX3P4-202ENST00000540428 ZSCAN29Q8IWY8 852 aaPredicted RBP14.86□□□□□ -0.03
CBX3P4-202ENST00000540428 RAET1EQ8TD07 263 aa14.86□□□□□ -0.03
CBX3P4-202ENST00000540428 XAGE2Q96GT9 111 aa14.86□□□□□ -0.03
CBX3P4-202ENST00000540428 AFG3L2Q9Y4W6 797 aa14.86□□□□□ -0.03
CBX3P4-202ENST00000540428 ZHX2Q9Y6X8 837 aa14.86□□□□□ -0.03
CBX3P4-202ENST00000540428 MROH7-TTC4A0A0A0MT08 1334 aa14.86□□□□□ -0.03
CBX3P4-202ENST00000540428 MYPNQ86TC9 1320 aa14.86□□□□□ -0.03
CBX3P4-202ENST00000540428 GPR75-ASB3A0A0A6YYF3 556 aa14.85□□□□□ -0.03
CBX3P4-202ENST00000540428 DDTLA6NHG4 134 aaPredicted RBP14.85□□□□□ -0.03
CBX3P4-202ENST00000540428 TBC1D12O60347 775 aa14.85□□□□□ -0.03
CBX3P4-202ENST00000540428 MYCP01106 439 aaPredicted RBP14.85□□□□□ -0.03
CBX3P4-202ENST00000540428 CYP2C8P10632 490 aa14.85□□□□□ -0.03
CBX3P4-202ENST00000540428 FCGRTP55899 365 aa14.85□□□□□ -0.03
CBX3P4-202ENST00000540428 TFCP2Q12800 502 aa14.85□□□□□ -0.03
CBX3P4-202ENST00000540428 DDX4Q9NQI0 724 aaKnown RBP14.85□□□□□ -0.03
CBX3P4-202ENST00000540428 CCER2I3L3R5 266 aa14.84□□□□□ -0.03
CBX3P4-202ENST00000540428 IPO8O15397 1037 aaKnown RBP14.84□□□□□ -0.03
CBX3P4-202ENST00000540428 RHBDL3P58872 404 aa14.84□□□□□ -0.03
CBX3P4-202ENST00000540428 MECOMQ03112 1051 aa14.84□□□□□ -0.03
CBX3P4-202ENST00000540428 MTFR1Q15390 333 aa14.84□□□□□ -0.03
CBX3P4-202ENST00000540428 ZSWIM8A7E2V4 1837 aa14.84□□□□□ -0.03
CBX3P4-202ENST00000540428 LDHCP07864 332 aa14.83□□□□□ -0.04
CBX3P4-202ENST00000540428 GJB1P08034 283 aa14.83□□□□□ -0.04
CBX3P4-202ENST00000540428 GJA8P48165 433 aa14.83□□□□□ -0.04
CBX3P4-202ENST00000540428 UBXN2AP68543 259 aa14.83□□□□□ -0.04
CBX3P4-202ENST00000540428 GSTO1P78417 241 aa14.83□□□□□ -0.04
CBX3P4-202ENST00000540428 PICALMQ13492 652 aa14.83□□□□□ -0.04
CBX3P4-202ENST00000540428 SLAIN1Q8ND83 568 aa14.83□□□□□ -0.04
CBX3P4-202ENST00000540428 SHISA4Q96DD7 197 aa14.83□□□□□ -0.04
CBX3P4-202ENST00000540428 HMG20BQ9P0W2 317 aa14.83□□□□□ -0.04
CBX3P4-202ENST00000540428 ECM2O94769 699 aaPredicted RBP14.82□□□□□ -0.04
CBX3P4-202ENST00000540428 CAPN2P17655 700 aa14.82□□□□□ -0.04
CBX3P4-202ENST00000540428 ARID4AP29374 1257 aaPredicted RBP14.82□□□□□ -0.04
CBX3P4-202ENST00000540428 PRKCZQ05513 592 aa14.82□□□□□ -0.04
CBX3P4-202ENST00000540428 GADL1Q6ZQY3 521 aa14.82□□□□□ -0.04
CBX3P4-202ENST00000540428 SPATA5Q8NB90 893 aa14.82□□□□□ -0.04
CBX3P4-202ENST00000540428 ZNF384Q8TF68 577 aa14.82□□□□□ -0.04
CBX3P4-202ENST00000540428 NSUN4Q96CB9 384 aaKnown RBP14.82□□□□□ -0.04
CBX3P4-202ENST00000540428 NEUROD6Q96NK8 337 aa14.82□□□□□ -0.04
CBX3P4-202ENST00000540428 TBC1D2Q9BYX2 928 aa14.82□□□□□ -0.04
CBX3P4-202ENST00000540428 OSBPL5Q9H0X9 879 aaPredicted RBP14.82□□□□□ -0.04
CBX3P4-202ENST00000540428 DOCK2Q92608 1830 aa14.82□□□□□ -0.04
CBX3P4-202ENST00000540428 AK9Q5TCS8 1911 aa14.82□□□□□ -0.04
CBX3P4-202ENST00000540428 COL2A1P02458 1487 aaPredicted RBP14.82□□□□□ -0.04
CBX3P4-202ENST00000540428 GNAI2P04899 355 aa14.81□□□□□ -0.04
CBX3P4-202ENST00000540428 CCL5P13501 91 aa14.81□□□□□ -0.04
CBX3P4-202ENST00000540428 TRIM27P14373 513 aa14.81□□□□□ -0.04
CBX3P4-202ENST00000540428 AGTPBP1Q9UPW5 1226 aa14.81□□□□□ -0.04
CBX3P4-202ENST00000540428 MYH2Q9UKX2 1941 aa14.81□□□□□ -0.04
CBX3P4-202ENST00000540428 TRIM75PA6NK02 468 aa14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 FXR1P51114 621 aaKnown RBP eCLIP14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 G3BP1Q13283 466 aaKnown RBP eCLIP14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 IRF5Q13568 498 aa14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 GORABQ5T7V8 394 aa14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 ATF7IPQ6VMQ6 1270 aa14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 UBE2Q1Q7Z7E8 422 aa14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 PROCA1Q8NCQ7 364 aaPredicted RBP14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 PXYLP1Q8TE99 480 aa14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 SMCR8Q8TEV9 937 aaPredicted RBP14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 RNF208Q9H0X6 261 aa14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 BIN2Q9UBW5 565 aaPredicted RBP14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 PNMA3Q9UL41 463 aa14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 COLQQ9Y215 455 aaPredicted RBP14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.8□□□□□ -0.04
CBX3P4-202ENST00000540428 H0YGN5 161 aa14.79□□□□□ -0.04
CBX3P4-202ENST00000540428 TNPO2O14787 897 aaKnown RBP14.79□□□□□ -0.04
CBX3P4-202ENST00000540428 IGSF3O75054 1194 aa14.79□□□□□ -0.04
CBX3P4-202ENST00000540428 UQCRFS1P1P0C7P4 283 aa14.79□□□□□ -0.04
CBX3P4-202ENST00000540428 SLURP2P0DP57 97 aa14.79□□□□□ -0.04
CBX3P4-202ENST00000540428 PI16Q6UXB8 463 aa14.79□□□□□ -0.04
CBX3P4-202ENST00000540428 HTATIP2Q9BUP3 242 aa14.79□□□□□ -0.04
CBX3P4-202ENST00000540428 RAI14Q9P0K7 980 aa14.79□□□□□ -0.04
CBX3P4-202ENST00000540428 GABRQQ9UN88 632 aa14.79□□□□□ -0.04
CBX3P4-202ENST00000540428 PNMA6EA0A0J9YXQ4 647 aa14.78□□□□□ -0.04
CBX3P4-202ENST00000540428 ADCY3O60266 1144 aa14.78□□□□□ -0.04
CBX3P4-202ENST00000540428 MCAMP43121 646 aa14.78□□□□□ -0.04
CBX3P4-202ENST00000540428 FLT3LGP49771 235 aa14.78□□□□□ -0.04
CBX3P4-202ENST00000540428 FAM110CQ1W6H9 321 aa14.78□□□□□ -0.04
CBX3P4-202ENST00000540428 TBC1D9Q6ZT07 1266 aa14.78□□□□□ -0.04
CBX3P4-202ENST00000540428 U2AF1L4Q8WU68 220 aaKnown RBP14.78□□□□□ -0.04
CBX3P4-202ENST00000540428 DPF3Q92784 378 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms