RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 ZFPM1Q8IX07 1006 aa15.49■□□□□ 0.07
COPS7A-211ENST00000540408 SLAIN1Q8ND83 568 aa15.49■□□□□ 0.07
COPS7A-211ENST00000540408 API5Q9BZZ5 524 aaKnown RBP15.49■□□□□ 0.07
COPS7A-211ENST00000540408 ABCF2Q9UG63 623 aa15.49■□□□□ 0.07
COPS7A-211ENST00000540408 A0A0G2JLL6 359 aaPredicted RBP15.48■□□□□ 0.07
COPS7A-211ENST00000540408 ZBTB22O15209 634 aa15.48■□□□□ 0.07
COPS7A-211ENST00000540408 CTNND1O60716 968 aaKnown RBP15.48■□□□□ 0.07
COPS7A-211ENST00000540408 CT47B1P0C2W7 299 aaPredicted RBP15.48■□□□□ 0.07
COPS7A-211ENST00000540408 BCRP11274 1271 aa15.48■□□□□ 0.07
COPS7A-211ENST00000540408 CAPN2P17655 700 aa15.48■□□□□ 0.07
COPS7A-211ENST00000540408 PRKCZQ05513 592 aa15.48■□□□□ 0.07
COPS7A-211ENST00000540408 PRRT2Q7Z6L0 340 aaPredicted RBP15.48■□□□□ 0.07
COPS7A-211ENST00000540408 SMCR8Q8TEV9 937 aaPredicted RBP15.48■□□□□ 0.07
COPS7A-211ENST00000540408 NOB1Q9ULX3 412 aaKnown RBP15.48■□□□□ 0.07
COPS7A-211ENST00000540408 AKAP2Q9Y2D5 859 aa15.48■□□□□ 0.07
COPS7A-211ENST00000540408 SLC45A1Q9Y2W3 748 aa15.48■□□□□ 0.07
COPS7A-211ENST00000540408 NR2E3Q9Y5X4 410 aa15.48■□□□□ 0.07
COPS7A-211ENST00000540408 BRCA2P51587 3418 aa15.48■□□□□ 0.07
COPS7A-211ENST00000540408 PHF20L1A8MW92 1017 aa15.47■□□□□ 0.07
COPS7A-211ENST00000540408 CHRDL2Q6WN34 429 aa15.47■□□□□ 0.07
COPS7A-211ENST00000540408 SHISA4Q96DD7 197 aa15.47■□□□□ 0.07
COPS7A-211ENST00000540408 FAM163AQ96GL9 167 aaPredicted RBP15.47■□□□□ 0.07
COPS7A-211ENST00000540408 COPRSQ9NQ92 184 aa15.47■□□□□ 0.07
COPS7A-211ENST00000540408 PA2G4Q9UQ80 394 aaKnown RBP15.47■□□□□ 0.07
COPS7A-211ENST00000540408 AFG3L2Q9Y4W6 797 aa15.47■□□□□ 0.07
COPS7A-211ENST00000540408 ZSWIM8A7E2V4 1837 aa15.47■□□□□ 0.07
COPS7A-211ENST00000540408 GAKO14976 1311 aa15.46■□□□□ 0.07
COPS7A-211ENST00000540408 TNPO2O14787 897 aaKnown RBP15.46■□□□□ 0.07
COPS7A-211ENST00000540408 ADCY3O60266 1144 aa15.46■□□□□ 0.07
COPS7A-211ENST00000540408 TIMM10P62072 90 aa15.46■□□□□ 0.07
COPS7A-211ENST00000540408 MAP3K10Q02779 954 aa15.46■□□□□ 0.07
COPS7A-211ENST00000540408 PICALMQ13492 652 aa15.46■□□□□ 0.07
COPS7A-211ENST00000540408 MVPQ14764 893 aaKnown RBP15.46■□□□□ 0.07
COPS7A-211ENST00000540408 ERICH6Q7L0X2 663 aa15.46■□□□□ 0.07
COPS7A-211ENST00000540408 U2AF1L4Q8WU68 220 aaKnown RBP15.46■□□□□ 0.07
COPS7A-211ENST00000540408 PDS5AQ29RF7 1337 aaKnown RBP15.45■□□□□ 0.06
COPS7A-211ENST00000540408 ADORA1P30542 326 aa15.45■□□□□ 0.06
COPS7A-211ENST00000540408 BTDP43251 543 aa15.45■□□□□ 0.06
COPS7A-211ENST00000540408 FLT3LGP49771 235 aa15.45■□□□□ 0.06
COPS7A-211ENST00000540408 RASGRF1Q13972 1273 aa15.45■□□□□ 0.06
COPS7A-211ENST00000540408 PXYLP1Q8TE99 480 aa15.45■□□□□ 0.06
COPS7A-211ENST00000540408 COA7Q96BR5 231 aa15.45■□□□□ 0.06
COPS7A-211ENST00000540408 PNMA3Q9UL41 463 aa15.45■□□□□ 0.06
COPS7A-211ENST00000540408 GABRQQ9UN88 632 aa15.45■□□□□ 0.06
COPS7A-211ENST00000540408 DDTLA6NHG4 134 aaPredicted RBP15.44■□□□□ 0.06
COPS7A-211ENST00000540408 TRIM75PA6NK02 468 aa15.44■□□□□ 0.06
COPS7A-211ENST00000540408 SGPL1O95470 568 aa15.44■□□□□ 0.06
COPS7A-211ENST00000540408 MAP4K4O95819 1239 aaPredicted RBP15.44■□□□□ 0.06
COPS7A-211ENST00000540408 TFRCP02786 760 aaKnown RBP15.44■□□□□ 0.06
COPS7A-211ENST00000540408 LDHCP07864 332 aa15.44■□□□□ 0.06
COPS7A-211ENST00000540408 GNAI3P08754 354 aa15.44■□□□□ 0.06
COPS7A-211ENST00000540408 GSTO1P78417 241 aa15.44■□□□□ 0.06
COPS7A-211ENST00000540408 GORABQ5T7V8 394 aa15.44■□□□□ 0.06
COPS7A-211ENST00000540408 SH3BP5LQ7L8J4 393 aa15.44■□□□□ 0.06
COPS7A-211ENST00000540408 CDCA7LQ96GN5 454 aa15.44■□□□□ 0.06
COPS7A-211ENST00000540408 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.44■□□□□ 0.06
COPS7A-211ENST00000540408 MROH7-TTC4A0A0A0MT08 1334 aa15.43■□□□□ 0.06
COPS7A-211ENST00000540408 A0A1B0GUL7 405 aa15.43■□□□□ 0.06
COPS7A-211ENST00000540408 SRGAP3O43295 1099 aa15.43■□□□□ 0.06
COPS7A-211ENST00000540408 TBC1D12O60347 775 aa15.43■□□□□ 0.06
COPS7A-211ENST00000540408 FARP2O94887 1054 aaPredicted RBP15.43■□□□□ 0.06
COPS7A-211ENST00000540408 MECOMQ03112 1051 aa15.43■□□□□ 0.06
COPS7A-211ENST00000540408 IRF5Q13568 498 aa15.43■□□□□ 0.06
COPS7A-211ENST00000540408 XAGE2Q96GT9 111 aa15.43■□□□□ 0.06
COPS7A-211ENST00000540408 NEUROD6Q96NK8 337 aa15.43■□□□□ 0.06
COPS7A-211ENST00000540408 TBC1D2Q9BYX2 928 aa15.43■□□□□ 0.06
COPS7A-211ENST00000540408 UNC93B1Q9H1C4 597 aa15.43■□□□□ 0.06
COPS7A-211ENST00000540408 TAOK2Q9UL54 1235 aa15.43■□□□□ 0.06
COPS7A-211ENST00000540408 AGTPBP1Q9UPW5 1226 aa15.43■□□□□ 0.06
COPS7A-211ENST00000540408 ATRNL1Q5VV63 1379 aa15.43■□□□□ 0.06
COPS7A-211ENST00000540408 GPR75-ASB3A0A0A6YYF3 556 aa15.42■□□□□ 0.06
COPS7A-211ENST00000540408 NPM3O75607 178 aaKnown RBP15.42■□□□□ 0.06
COPS7A-211ENST00000540408 INHAP05111 366 aa15.42■□□□□ 0.06
COPS7A-211ENST00000540408 TFCP2Q12800 502 aa15.42■□□□□ 0.06
COPS7A-211ENST00000540408 PABPC4Q13310 644 aaKnown RBP eCLIP15.42■□□□□ 0.06
COPS7A-211ENST00000540408 UBE2Q1Q7Z7E8 422 aa15.42■□□□□ 0.06
COPS7A-211ENST00000540408 MEIS3Q99687 375 aa15.42■□□□□ 0.06
COPS7A-211ENST00000540408 OSBPL5Q9H0X9 879 aaPredicted RBP15.42■□□□□ 0.06
COPS7A-211ENST00000540408 DDX4Q9NQI0 724 aaKnown RBP15.42■□□□□ 0.06
COPS7A-211ENST00000540408 RBM27Q9P2N5 1060 aaKnown RBP15.42■□□□□ 0.06
COPS7A-211ENST00000540408 MYH2Q9UKX2 1941 aa15.42■□□□□ 0.06
COPS7A-211ENST00000540408 EVI5O60447 810 aa15.41■□□□□ 0.06
COPS7A-211ENST00000540408 ELNP15502 786 aa15.41■□□□□ 0.06
COPS7A-211ENST00000540408 TRMT2AQ8IZ69 625 aaKnown RBP15.41■□□□□ 0.06
COPS7A-211ENST00000540408 ANKRD13CQ8N6S4 541 aa15.41■□□□□ 0.06
COPS7A-211ENST00000540408 NOL10Q9BSC4 688 aaKnown RBP15.41■□□□□ 0.06
COPS7A-211ENST00000540408 DOCK2Q92608 1830 aa15.4■□□□□ 0.06
COPS7A-211ENST00000540408 GCLCP48506 637 aaPredicted RBP15.4■□□□□ 0.06
COPS7A-211ENST00000540408 SPP2Q13103 211 aa15.4■□□□□ 0.06
COPS7A-211ENST00000540408 FAM110CQ1W6H9 321 aa15.4■□□□□ 0.06
COPS7A-211ENST00000540408 SPATA5Q8NB90 893 aa15.4■□□□□ 0.06
COPS7A-211ENST00000540408 PROCA1Q8NCQ7 364 aaPredicted RBP15.4■□□□□ 0.06
COPS7A-211ENST00000540408 ZNF280CQ8ND82 737 aa15.4■□□□□ 0.06
COPS7A-211ENST00000540408 ARHGAP45Q92619 1136 aa15.4■□□□□ 0.06
COPS7A-211ENST00000540408 DEFB118Q96PH6 123 aa15.4■□□□□ 0.06
COPS7A-211ENST00000540408 AS3MTQ9HBK9 375 aa15.4■□□□□ 0.06
COPS7A-211ENST00000540408 RAI14Q9P0K7 980 aa15.4■□□□□ 0.06
COPS7A-211ENST00000540408 RFX7Q2KHR2 1363 aa15.39■□□□□ 0.05
COPS7A-211ENST00000540408 RHBDL3P58872 404 aa15.39■□□□□ 0.05
COPS7A-211ENST00000540408 HMG20BQ9P0W2 317 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms